Chy2G036870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G036870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chrH02: 11189765 .. 11200388 (+)
RNA-Seq Expression	Chy2G036870
Synteny	Chy2G036870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATTGCAATGCCACAAAGTACCCAATCGAACCCAAGGCACAACTTCGCAAAGACATGGAAGGAGCACCAATTGATGCTACGGAGTACAGAAGCATCGTTGGTTGTCTTAGATACTTACTAAACACAATGCCAGATCTTTCGTATGCTGTTGGGATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATACCAAAGGTCCCAGAGAATTCGATATATTCAGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGAAGGAAAAGCACAAGTGGAATGGCATTCTACTTAAACGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAGCGTTGTGGTTAAGATGCCTTGTTAGCGAGATAGTCGGAATGGAGCCAAGACTGGTAACATTATTCGTGGACAACAAATCGCGATAGCTCTCATGAAGAATCTCGTATTTCATGGTCGCAGCAAGCACATAGATCCACGTTTTCATTTCATTCGAGAGTGTCGAGAATGGATAAATTATCGTTGAATTTGTCAACACTGGAGAACAACGAACCGATGTTCTGACTAAAGCATTGACGGGAGTAAAGTTAGTTGCTATGCGTCAGCTACTTGGTGTTCGTAATTTAGAATCATGTTAGAATTAGGGGTAGTGTGAGCTATTAATCTGCCATGATCTTCCTAAATAGGTGGAAGAATTAGTTCACACGTTATTTTTCTATTTATTGTTTTGGTTATTTATTCTTTTTTAATTATCTTCAAAATTTTAGCAACCACTAAGTTAGTATTTTTGCTCCCTTTTTAGACTATAAATATTAGTCCATTAAATTGAATAAAAGCAAGAAGTTCCATTTTTTTTTTCTCCCTCTTGACAATATATCTTACAAAATATTTATCTTTGTTTTTATTTGTTTTCTTCAAGAAGAGTGCATGAGATTTTTACAAATCCTTTATTTTAAAACCAACATTACAAAGCCAGCTCGTGAATTCCAACAAATTTCATATATTAAATATCAGCTTAAGAACAAATTTCAAAGTTGGATCAGGTTGTTTTGACATTGGATCTATCCTATATTAAATAGTAAACTTATTATCTAACCACTAACAATTCTATATTTAACTGTCACATATAATCAATTCTTAATCAAAAATTTGGGTTAAATTATACACTATATCATTAAATTTTGAATTTTGGATCTAAAATACATTTAAACTTTCAAAAGTTTTAAAATAATACCCTTAAACATTTAGTCAATAATACATTTTTTTACATTTTTCATTAGTTTTAATTTGAATCGAAATATGGTTAATATTTTGCTTCTTATTTTTTAAACTTTCAAAAGTTAATATTTGTTTAATCAATTTTAATTTATTGGATGTTTAGTTTGAATTTGTTTAATTGAAAATTATTTGAATTTGTTTAATTGAAAATTAATTGATTTTGTGAAAATTAGATTTAATTAAATATTTGGATGAATGTTTAAATAATCGGAGGATTTGGAATTTTGGTGTAAAAATAAAAATGACTTAAGTGGTATGTTATTGGTTTAATTAAATTGGTGGATTTTTAAGAAATTTTGGTTCATTATACATAAACATATATATTAGATGAAGGTTAAAAGAAGTAGGGGCTATGAAGTTTAGAGGTTTGGATGAAGTAGAGAGTGTGAATGTTGTAAAAAATTTTAGGATTTTTTTGTGACCTTTTCTTAATGTTGTGTCTATGGATGAAGAAGAAGTGATTATTTATAGCTAAAAAAACTTCTCCAAATAGATACAAATTTTAAATGGTAGTTTTTTTAATTTGAAAATAATGCTAATATTAACATTTATTTCAAAATGACATGGAGCTTTTAATAATCAAAACCAAAATAAAAAATTACCATATTTAGTATTTATAACCTACGTTAGTTAGATTAACTAATTTTGATTTAGTTACTCTAACCACAAGACCCACAAAACTTTAAAAGTAATTGAATAACATTTTTTTTTATAAAAGTTGGTTAATCACAAAATAAAAAAATAATCAATTTAAGGCAAAAATTAATCTAATAATTGAATTAATTTTAAATAAAGTCTGACAAAATTAGGTGGCTACATCACCCATCACATTTTTTAATCCCAATTAAATTAATAAACATCCTCAATAAAATGAATCTTAAATGAAATGAAGTAGAAGGTAATCATAAAACATGACTATCTCCATAAGTTAACTAAAATTGGAAAAAAAAAAAAGTAGAAGGTAATTAGATGACAATCTAAATATAATCAAACGACTATCTTAATATTTTTGTAGTTGCGGTTAAGCTTCCAACAGTAATTTAATTTCTATAGTGGCAATAAGATGATTGTTAATATTAGGTAGATTACAAAAATGGATGGTAAAAAAAATCTACTTAGTAATTGACAAAAAAAATGTAAAGTAATCGGATGACAATTATAATGTAATAACAAGAAAACCTTAACCATTAATAAAAGATGAAAGGTAACCATATGACAATAGGATAATAATTAGAAACTAATTAATAATTAACAAAAGATGGAAGGTAATGAGTTGATTTTAAAAAATTGCTTAAAAAAATGTAAGATCATTAAATAACAATCGATATCATTTGCAATTAAATAATAATTAATATTAAATTAAATAACAATGAGATGATAAATCGGTCACATTAACGATCAATATAAGATAGCAACAAAGACAGTGATCAAATAAACAATATAATGTATATAAACATGTTGCAAAAAAATTGTTTTTAGCTGGTAGAGATGGTTGCACATGGCTGTGCTTGTCTTCGTCGAAGCTGCTCATTTTATTTATTTATTCATTCTCAAGTGGTTGACTAGATAACTATATTGTCTATAGTTTCAACAAGATTTAAGAAGTATATAAATATATATATATATATATTATTTCCTATGCTTTTGTGAACATTGAAATCTACACTTAGATATAAGTTAAATTATATATATATTTCCACACATGCATATACATAGATTTATTTCTAACTCAGTTCCAACGTGAGAGATGCTAAAAAAATAGTTAAAATCATTTACTTTATTTCATTTTATAGTCTCCCAAGCCCAATGCCACTTAAATGTGTTAAAATTATTAAACCTTATAATTTTTAGCAAATATTATATAGCCATATATCCTATAACTTTTAAATTATCACATTTAGTAGGGAGGCTTGTGTGCACCTGTTGATCCAAATCGTATCCTTTTAAAAAAAAACATTGCAACAATTAACATGTAGATTATTTGTATTAACGCAATTGACATACTAAAAATAAATGGATAATCTAAGTCGTGTATATTATAAAATTTTGATTATGATATATATATATATATATATATATATATATATATTGATTCCTTTACTTTGAAACTTAGGCTAATGTAATCCATGTTAAATATCTAAATGATATAATATAACGTATGAAATGTGTTCTATTTCCACTTAATCCAAGTCTTGTTCCGTGATTTTACGATCTTATTTGATTGTGTTATAGGATTTGAACAATTCATGAATGAAATTTGGAGTTGATATCATTTTAATTTGGTGCTAATTCGGACAATTTGGATTCATACAACACGAATAATGGAGGCAATAAGAAGTAAGAATGTGTAGTTTGGCATGTTGGAGCCTCTGCACCTCGGCATTCCACGATGTTGGAGGCGGCGCAAAAGAAAGACCCAGAATGCAAGATCTCCCATTAATAGCTTGATGTTGACGCACTACCCTTGGGCGTCGCGGCGCTCTGAAGATGAAATGACCATATTCGATGCCGCCTAAACCCTATTCAGAATCCCAACCTCTTTTCACATTTTTCTCCCTATTTTTCAGTTTGAGTCCCAACCTCTTTTCACATTTTTCTCCCTATTTTTCAGTTTCTTTCATGTTGTTTTCCATATTGAACAATTCCTCATCATTCGGCTTATGGATGAGAGGCTAAAGTACCATTTTTCTAGTTTGGGTTTCTTAGATTCTCCCTATATCCTTTTGAATTCATGAGAACTAATTAAATTTGTTTTATGTAATCTTTGGTTCAATTTAAAATTTGCATGATATATGTATAGATGCATGGAAAATATATAGCTTTCGCTTTGCATCAAATCTTTGACTTGTGACAATAAGATAAGATTTGGTTAGAAGCAATAGGTTAGGTTAGCTTGTAATTTTATTTTGATGCACATTGTTTTAACCAACCTAGGATTGAACCTATTGAATGTCAATTAAACGCATGAAAATTAGGCATTCCACGAAAAGGATCTCTAGAACTTAATGCTATTGAAAAATTCAATATTGCATGCTTAATCATATTGTATTAGAACAATTAGAACTTTGGGACAATTTAGTTATTTGAAGTAATTAAATTGATTGGACGAATATTGCATCTAGATAAGTGATGATAGTTTGATGAATTGATTCTTTGAATAAGGGAGAAATTGTTGTAACTCAAGTCAGATTCTTTCAACATTGATTTTTTTTTTTTCGCTTTTCTTCCTTTCACTGCAATTTACTTTCTTATGATATAATCAATTTCAACTCAAACCCCCCCTTTTCGGTTATGTGGTTGGAAATTAATTTGTTAGAAAATCGGTGCGCTCCCTCTTGACTTGCCACTAAGACTAGTGTTTGATGGGTGAATTCAATTATTTATTTGGTAGGGTTTGGGGTGGCGAAATATTAATCCTTCTATCATTAAATATATTCAATCTCATTATATTTATGATATAATTTCTATTATTAACTTACTCTTCATTTTGTAACTCCTCGAGATATATTTGAATGAAAGTGACCATGAGAATATAAAAATCTAATTAAAAGAATTTAAACGGATTGATACAACCTTTACTAGTAAGGTATGCATCTACCTTTTCAATGACTCATTAAGGGTGCTTACCTTGAAAAACATTGCATCTAAATTTCACCTAGTGATTTCTTTCTTTTGTGTTGGAAAATTACTTTTCTAAGAGGAAGCCATATTTTAATAAAACTAAAGAAAAAGATCAACATTGCCCGTCTGCAAAATCGCCCGCTCCTTGCAGTTGGACTTCGCCTCTCAATCTGTTGACACCTCCTCATCTTTTGACTCCACCTCTCCTATTTGCTCGTCTCACCGTCCATCGTCGTTGTCATATAGGTATATAGTGAATCTTTACCTATTGGTACACTCGTTTACACACAGCCTTTATTCTTCATTCCTCGTCAATTTCTGTAACACCCTAGATAATTTTTAAAAATATATATTTTATTTTACTCAAATTGCTTTATTTTATTTTTATTTTTTTGATTTTTTTTAGATTCTAAATTTGTTGGGTGTTATATTATTGAATTTGAGAGAAAGGATAAGAAATATAAATTCATTAGATAAAGTAATAATGATAATAGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTGTTGTTGTTGTTGTTGTTTAAAAAGAAAAAAAAAAGAAAAAGAAAACCCCCCTTCTTTCTTCACGCGTGCGTCACCCCCCTCCCCCACCTTCTCCCCCCCTCTTCTTCTTCTTCTTTTCCTTCCTGTGTCCGAGCCCAGCCGCCACCTCACTTTCCTTCCGTCGACTTTAGTCAGCCGTCACCCACCTTCCAACCTTACGTCGACCACCCTCAGTCACTGCTACAACTGCCGACACGCACCGTCGAATCCATCGTCACCCCGATTCCTCCTTCTCCTTCACTTTCAGCTAGCCGAGCCGCTCGCGTCCATTAGGATTGAAGCTTCGCGTCGTTCGGGTCACGCAAGTTGATCGTCGAGCGTCACGTTCGCAAAGCGCTGCTGCACGACTTTGCCTTCCAGCCGCGGGTCTTCGTTTCCAATTCCGTCAGCGTCACAGCCGCCGCCGCGTCGTACGAATTGTAGTCGGGTGGTCGCAACTTTCTGTCTCCAGCAGTGGGTCCGACGCCTCTTCACTTGTCGTTCAAATTTACCTTTCGCGGGCCTCGATTTCACCTGTACTAAGTTGTGATTTTTTCCTTGCCACAAGAAGTATTGAGTTTTAGTGAAAGTTTGTAATAGTGAATTTGATGGTTTCTACTTCGTTGAGGTGAGATGTTAAATTAAACGTTTGGTTAACATTGTTCTTTGAAGGTGTCAATTGAGGATGGTGTTTGACTTCGTGGAGTGACGACAAATTCGTTTGGAGTTAATTTCCCTATTTAACTTAGGATTGGTGTTGGACTTTATTGATCAAGAAACTTAAGTAACCTCAAGGTAAGAATTCTTACTACTGGACTCAACGATCCAATTGAGATGTATTGTATGTATGGACCCCGCTAAACTGGGAGTGACTGATCGATATGTAAATTATAATTGATGACTGTTTAGCTGTACAAACCTTGTTGAATTGAGATGAACTAACTGTTATGTAAACATAAAACTGTGAACCTTGAATGGATTAGGTTGTGGGTTGTTGGTTGTTATGTTAGGGTTTAGATAGTGTCCTGTTGGTTGGATTGACGAACTAAATTGTTTTGACTGAACCGAGTTGAGCTGTGCTTGGGTATAAGTTTAATTCGTTTGAGGAATCGTTTTGATAATGATTGATTATGTTTTGGATTTCTTAAGTTGACCATAATGGTGTTGAACTGAAAGAATAAAACGATGGTTGTTTAAATTGCAAATCTGTTTGACTGATTAAAATGTCAAATTGGGACTGAGGGGAAATTGTTAACTTTATCTATAGGGTAGTGTACCTTGTAGGTGTCCTACGGGATCACCACCTGTTGTGCATCCTTCGGGAGCACTAGACTAATATGTGTTTTCTGCAAGCACTAGACTGATATGAGCGTCCTTCGGGGCGTTAGACTGATTATGTGTATCCTACGGGATCACAAGACTGTGAAAGTGCAGGGTACCCTCAATAGGAAGTTAACAGTTTGATTTTTCTCCTAACGGGACCAGTAGTGGGTCTCTTACTGGGTATGTTAATACTCACCCTTTAATGTTTAACTTTTCAAGCAAGGGTAATACAAGGGGCACACCAACGAGGGACAAGAAGGAGCCGTGATTTGCCATAGGGGAAAAGTCTTTCAAACTGCTTCCGTTTTAATGTTTTGTTTTTCTTAGTATTTGAGACTGAACTGAGTTTCCTTCTATTTATTTTGACAACTGTTATTTGTTTCATTTTTTTTTATAAACAATAGTTTTAAATTTTTAAACTCATTTGAAATAGGGCCCGAATAAATACTCCTTGATATTATTGAAATTTTATTTCAATTGTCCAGTTTTATGTTTAAAGTATGAGTCTTGCATTAAAGTATTAATTTCAACTTATTCGAAAAGTTGGGTCATTACAATTTCCCTCTTCGATCTATAGATCTTCACCTTCAAAGGGTTGTTTGGCCCCTGGCTTGGAATCTAGTGGGCTTGACATTTGATGCTAAGCCCATTTTTGGCCCATGGTTCGCTTAATATGTGGTGTAAATTCATGGGTTTTTTAAAAAAAAATTAAATTTTAGTTATCAATTTAAATTAGTAATTTCACTTTCATAAAATTATAACTATAATTTTTGTATGACAAGTCAAATAAATTAAATATTGAAATAATTTAAGTTGGTTTGACTTAAAAGGATTAATTTTTTTTTTTATATATAATTTTATGTATTAAATAAGATTTTTTCTAATCAAAATAGTTAGTGTAATTTCTTATTGTTTTAAACGCATAAATATAGAATTTCTTTATTTTTTGTATATGTAAAATAAATAAAAAATTATTACTCAAATAAATAATAGAAAATGGTACATTTTTTTTAAGAATAAAAATAAATGAACATATTAAAACTTTTCTTTTCATTTTTGTTTTATTATTTTTTGTATGGAGAAAATATAATCCCATCTATTTAAGAATAAAAAATAGAAAATGGTACATTTTTGTTTTACTAGAAGACTCGGAACTTATTTGAATTGATTTAAGAAAAAAATATTATTTTTTATTTAAAAAAACTCATTTTTATTTAAACTCTTTTGATAAAAGCGGTTTAAATATTACATTGCATGTGCATCATAGGAATGCATCCATAACTATCACTAAATATAACTCTATTTGACTTTCGTTTTTGCATGACCCTTTTGTTATGCGTATTTTAAATCTAGCTATTAGACATTTTTTAATGTTTTGCTTAATTGAAACTTTGGTAAACTCCATCTGATTACTTTACTTGTTATATTTTATAAATAGTTTGTAATAATCCTAATTAGACCATTTATGTCAATGCAACTGTAATCAAAATTATTGTTATTGAATGTTAAAACTTCGTGAAAATCAATAAGTCAAGAAATTGAATTATATGTACAAAATATTTAAAAAAAATCAATTAAATATTTTATACATGATAAATTTAGATTGTACCATTGACAAAAAAAAAAAAAAAACAACAGATTATCAATGCCTGCAACCCAAATACAGACATCTGTAATTTCCAAGCATCATGATCCCATCATCAAGTAAGGAAGATGTTGCTAGGTCATAGGGAATGTGGAGAACATCGAATATTCGAATCTTCGGCTATCAGAGGACTACTATCAACTTTTAAATTTGCTAATTTTGCAATTTAAAAAAATAGTGACATGGACTTTATTATCATAAATTTTTTTTTGCTATTTTTGTAAATATCCCTTCTTAATATTTGAAATGGTAGGAAAATTCAGAGTGAAAATATAATGTTTTAAAATTATTTAAAATACCAACAAAATAATTCAAACCTTCTAAAGATGTTCTAAAAAACACTATAAAGTTGCATTTTAGAAACTGGTGCACCAAAATATACATATCTCTCAAAGCACAAACAATATGTCTTGAAAATTCAATGAACGTACAGACATATATTGTAAAGTTCCAGACCAAAATTTAGGCTAAGGATTTAGAATCGGAATGATTCCATGTGGCAATGTGTTTTTATCCTTTCTTGCTTTCAAAGAGAGGCTTCCAACCTTGAATACTATCTTTCAACATGTTCTGTGTGAGATGTTTTGTGCTCCCTTACTCACATGTTCGTCTTTAAAAGCAAAAATATATTGATTTAAAAAAATCAACTGAAGCTCGAGTTTTACCCTGCTTTAAAATTCAAGATATAGAAAAAAAAAAAAATTAATTGACATGATTGTCCATCTATAAAATAAGAGGCTATGTTAATTATACTGTTGAGTTTACTTTGATACTTATAAACACAAACAATATTAATGATCTCTCTATCTCTCATCAAACACTTCACATTTTGAAATTAATTGAACAAAACTCAACAAAGCTCGTGAGCTGTATATCTCTCTTCCTATTTTTGTTTTAAAAAAACATTTTCAACAATGTGTAGAACGTTTGAATATTTAACTTCAAAAAATCAATTTCTTATAAAATTCTCTTTGGCGCCATTCGTTCTTATCCCTAAAAGTACTTCACATTTTAGTATTGAAAAATGCTCTCCCCATGCCTCTTGTTCTCCCTATATAAAGGCAAGAAGGAAGTGAAAGTTTCTCACACAACCAAAACCAAAAGCCAAAAAAGATAATAATGGCTTTGAAACCTAACTTCTTTCTTGGCTTTCTGCTTCTTTTCCAGCTTGTGGCTTCAGAGGCCTCAGACCATAGCCCAAGCTCTCCCATTCCCGCTTTACGACGATCAAGCTTCCCTCCTGGCTTTACTTTTGGTTCTTCATCGTCTGCTTATCAAGTATACTATCAAAATACACACAACATTTTTCGTTATATCATTGATTCTTAACGAAATGAATAATATTAATGCATATGCATTCTTATTGATTGATATATATGTTGTTCTTTTTTTTTAGTATGAAGGTGCTGCTTTTAGCTATGGAAAAGGAAAAAGTAATTGGGATACCTACACTCACCAATATTCTGGTTCTTTCTCTCTCTCCCTCACTAAAAATGTAAATTAATAAATACAATAAGGAGAAGAATTAATAAGTTTATGTTTGTCTTGGTGGAATTGTAGAGAGAATTGCTGGTAAAGGCAATGGATTAATCAGTGTGGTGTGTGATTTAGATTATATTTTCAAGTGTTAATTAATTTGAAAAATAAGTCATTTTAGAAAGAAAAAAAATAGAGTGTTGGCACTCAAAATAGCATTTGAAATGTATTTTAAACCATTTGTATCAAAATAATTTTAATCTAAACCAACCTTAAGTAAAAAAGTTTAATTATGTTGAATTTTATACTTTAGCTAGCTACTTGTCCTTGCTACATTCCACATGCTTTGCTCAGTATATTGCATTCGTATCATATATATGTACACACATACATTTGTCTTAGTTGTTTTTAATTTAATAAATATAGTAGAGTGAAATTGATTAACAACTAAATCTTGAGGATATGTACTATAAATGTACTATAATGCAGGAAGATGTTGCCATTATGAGTCGTATAGGTTTCAATGCTTACAGATTCTCAATTTCTTGGCCTAGAGTCTTACCAAGTAAGTTGGGATTTAAAGATCTG

mRNA sequence

ATGGCTGATTGCAATGCCACAAAGTACCCAATCGAACCCAAGGCACAACTTCGCAAAGACATGGAAGGAGCACCAATTGATGCTACGGAGTACAGAAGCATCGTTGGTTGTCTTAGATACTTACTAAACACAATGCCAGATCTTTCGTATGCTGTTGGGATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATACCAAAGGTCCCAGAGAATTCGATATATTCAGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGAAGGAAAAGCACAAGTGGAATGGCATTCTACTTAAACGAAAGCTTGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAGCGTTGTGGTTAAGATGCCTTGTTAGCGAGATAGTCGGAATGGAGCCAAGACTGATCTG

Coding sequence (CDS)

ATGGCTGATTGCAATGCCACAAAGTACCCAATCGAACCCAAGGCACAACTTCGCAAAGACATGGAAGGAGCACCAATTGATGCTACGGAGTACAGAAGCATCGTTGGTTGTCTTAGATACTTACTAAACACAATGCCAGATCTTTCGTATGCTGTTGGGATGGCGAGTAGGTATATGGAAAGGCCTACAACCATGCATTACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATACCAAAGGTCCCAGAGAATTCGATATATTCAGTTACTCTGACAGTGATTTAGCCGGTGATCTCGACGGAAGGAAAAGCACAAGTGGAATGGCATTCTACTTAAACGAAAGCTTGACGGTGGCACTCTCATCTTGCGAAGCCGAGTTCATTGCAGCCACTACCGCAGCTTGCCAAGCGTTGTGGTTAAGATGCCTTGTTAGCGAGATAGTCGGAATGGAGCCAAGACTGATCTG

Protein sequence

MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYMERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFYLNESLTVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPRLIX

Homology

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BLAST of Chy2G036870 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 0


Query: 27   DATEYRSIVGCLRYLLNTMPDLSYAVGMASRYMERPTTMHYKVVKQILRYLRGTIHFGLT 86
            D TEYR IVG L+YL  T PDLSYAV   S+YM  PT  H+  +K++LRYL GT   G+ 
Sbjct: 1224 DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF 1283

Query: 87   YTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFYL---------NESLTVALSSCEAEFI 146
              KG     + +YSD+D AGD D   ST+G   YL          +   V  SS EAE+ 
Sbjct: 1284 LKKG-NTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1343

Query: 147  AATTAACQALWLRCLVSEI 157
            +    + +  W+  L++E+
Sbjct: 1344 SVANTSSELQWICSLLTEL 1361

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BLAST of Chy2G036870 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19
Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 10   PIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYMERPTTMHYKV 69
            P+ P  +L         D TEYR IVG L+YL  T PD+SYAV   S++M  PT  H + 
Sbjct: 1224 PMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQA 1283

Query: 70   VKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFYL-------- 129
            +K+ILRYL GT + G+   KG     + +YSD+D AGD D   ST+G   YL        
Sbjct: 1284 LKRILRYLAGTPNHGIFLKKG-NTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWS 1343

Query: 130  -NESLTVALSSCEAEFIAATTAACQALWLRCLVSEI 157
              +   V  SS EAE+ +    + +  W+  L++E+
Sbjct: 1344 SKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTEL 1378

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BLAST of Chy2G036870 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17
Identity = 55/136 (40.44%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 31   YRSIVGCLRY-LLNTMPDLSYAVGMASRYMERPTTMHYKVVKQILRYLRGTIHFGLTYTK 90
            Y S VG L Y ++ T PD+++AVG+ SR++E P   H++ VK ILRYLRGT    L +  
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF-- 1170

Query: 91   GPREFDIFSYSDSDLAGDLDGRKSTSGMAFYLNESL---------TVALSSCEAEFIAAT 150
            G  +  +  Y+D+D+AGD+D RKS++G  F  +             VALS+ EAE+IAAT
Sbjct: 1171 GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAAT 1230

Query: 151  TAACQALWLRCLVSEI 157
                + +WL+  + E+
Sbjct: 1231 ETGKEMIWLKRFLQEL 1244

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BLAST of Chy2G036870 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-17
Identity = 63/169 (37.28%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 1    MADCNATKYPIEPKAQLRKDMEGAPIDA-TEYRSIVGCLRY-LLNTMPDLSYAVGMASRY 60
            M +CNA   P+  K  +  ++  +  D  T  RS++GCL Y +L T PDL+ AV + SRY
Sbjct: 1152 MENCNAVSTPLPSK--INYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRY 1211

Query: 61   MERPTTMHYKVVKQILRYLRGTIHFGLTYTKG-PREFDIFSYSDSDLAGDLDGRKSTSGM 120
              +  +  ++ +K++LRYL+GTI   L + K    E  I  Y DSD AG    RKST+G 
Sbjct: 1212 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1271

Query: 121  AFYL----------NESLTVALSSCEAEFIAATTAACQALWLRCLVSEI 157
             F +              +VA SS EAE++A   A  +ALWL+ L++ I
Sbjct: 1272 LFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSI 1318

[Close]

BLAST of Chy2G036870 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-17
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M DC     P+  K          P D +++RSIVG L+YL  T PD+SYAV +  + M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
            PT   + ++K++LRY++GTI  GL Y     + ++ ++ DSD AG    R+ST+G   +
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 190

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALW 149
           L  ++         TV+ SS E E+ A    A +  W
Sbjct: 191 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Chy2G036870 vs. ExPASy TrEMBL
Match: A0A5K0VEQ6 (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS1129 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.2e-58
Identity = 114/173 (65.90%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M DCN TK P+EP++QL KD EG P+DATEYR  +GCLRYL++T PDL YAVG+ASR+ME
Sbjct: 202 MFDCNPTKIPMEPRSQLNKDPEGQPVDATEYRRFIGCLRYLVHTRPDLLYAVGVASRFME 261

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPT MH+K VKQILRYL+GTI+FGL YT+G  E  I  ++DSDLAGD+D RKS  GMAFY
Sbjct: 262 RPTVMHHKAVKQILRYLKGTINFGLVYTRGKGEEVIVGFTDSDLAGDVDDRKSIGGMAFY 321

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPRLI 165
           +NESL         TVALSSCEAEF+AAT AACQALWLR L+ E++G EP+++
Sbjct: 322 VNESLVSWNSQKQKTVALSSCEAEFMAATAAACQALWLRGLLDELIGREPQVV 374

[Close]

BLAST of Chy2G036870 vs. ExPASy TrEMBL
Match: Q10RM4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g05850 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.8e-55
Identity = 109/173 (63.01%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 1    MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
            M +CN+   PI+P++QL KD EG P+DATEYR I+G LRYLL+T PDLSYAVG+ASR+ME
Sbjct: 1155 MMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTRPDLSYAVGVASRFME 1214

Query: 61   RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
            RPT MH+K VKQILRY++GT+ +GL Y  G     I  Y+DSDLAGDLD R+ST GMAFY
Sbjct: 1215 RPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAGDLDDRRSTGGMAFY 1274

Query: 121  LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPRLI 165
            +N+SL         TVALSSCEAEF+AATTAACQALWLR L++E+ G+E + +
Sbjct: 1275 INQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAV 1327

[Close]

BLAST of Chy2G036870 vs. ExPASy TrEMBL
Match: A0A6G1EJC3 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014570 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.2e-54
Identity = 111/171 (64.91%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M++CN TK+P+E + QL KD EG P DA EYR I+GCLRYLL+T PD+S+AVG+ASR++E
Sbjct: 65  MSECNPTKFPMELRTQLHKDGEGHPADAMEYRRIIGCLRYLLHTRPDMSFAVGVASRFIE 124

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPT MH+K VKQILRYL+G IH+GL Y+KG     I  Y+DSDLAGDLD RKST GMAFY
Sbjct: 125 RPTVMHHKAVKQILRYLKGIIHYGLVYSKGGGAEVITGYTDSDLAGDLDDRKSTGGMAFY 184

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 163
           +NESL         TVALSSCEAEF+AAT AACQALWLR L++E+   +PR
Sbjct: 185 VNESLVAWSSQKQRTVALSSCEAEFMAATAAACQALWLRSLLAELNKEQPR 235

[Close]

BLAST of Chy2G036870 vs. ExPASy TrEMBL
Match: Q0J8A6 (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 107/173 (61.85%), Postives = 130/173 (75.14%), Query Frame = 0


Query: 1    MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
            M  CN T  P+EP++ L KD +G PIDATEYR ++GCLRYLL+T PDLSYAVG+ASR+ME
Sbjct: 1173 MQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFME 1232

Query: 61   RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
            RPTTMH K VK ILRYL+GT+  GL +  G    DI  ++DSDLAGD+D R+ST GMAFY
Sbjct: 1233 RPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFY 1292

Query: 121  LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPRLI 165
            +N SL         TVALSSCEAEF+AAT AAC ALWLR L+SE++G E + +
Sbjct: 1293 VNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRV 1345

[Close]

BLAST of Chy2G036870 vs. ExPASy TrEMBL
Match: B8BDZ6 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 107/171 (62.57%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 1    MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
            M  CN T  P+EP++ L KD +G PIDATEYR ++GCLRYLL+T PDLSYAVG+ASR+ME
Sbjct: 1173 MQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFME 1232

Query: 61   RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
            RPTTMH K VK ILRYL+GT+  GL +  G    DI  ++DSDLAGD+D R+ST GMAFY
Sbjct: 1233 RPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLAGDMDDRRSTGGMAFY 1292

Query: 121  LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 163
            +N SL         TVALSSCEAEF+AAT AAC ALWLR L+SE++G E +
Sbjct: 1293 VNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAK 1343

[Close]

BLAST of Chy2G036870 vs. NCBI nr
Match: XP_031742485.1 (secreted RxLR effector protein 161-like [Cucumis sativus])

HSP 1 Score: 307 bits (786), Expect = 5.75e-104
Identity = 155/171 (90.64%), Postives = 157/171 (91.81%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           MADCNATKYP+EPKAQL KD EGAPIDATEYRSIVGCLRYLLNT PDLSYAVGMASRYME
Sbjct: 44  MADCNATKYPMEPKAQLHKDTEGAPIDATEYRSIVGCLRYLLNTRPDLSYAVGMASRYME 103

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREF+IF YSDSDLAGDLDGRKSTSGM FY
Sbjct: 104 RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFNIFGYSDSDLAGDLDGRKSTSGMTFY 163

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 162
           LNESL         TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR
Sbjct: 164 LNESLVSWNSQKQKTVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 214

[Close]

BLAST of Chy2G036870 vs. NCBI nr
Match: KAE8645998.1 (hypothetical protein Csa_015477 [Cucumis sativus])

HSP 1 Score: 295 bits (754), Expect = 1.01e-99
Identity = 145/162 (89.51%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M DCNATKYP+EPK QL KDMEGAPIDATE+RSIV CLRYLLNT PDLSYAVGMASRYME
Sbjct: 1   MTDCNATKYPMEPKKQLHKDMEGAPIDATEHRSIVCCLRYLLNTRPDLSYAVGMASRYME 60

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPTTMHYKVVKQILRYLRGTIHFGLTYTKGP+EF+IF YSDSDL  DLD RKSTSGM FY
Sbjct: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPKEFNIFGYSDSDLVSDLDARKSTSGMTFY 120

Query: 121 LNESLTVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 162
           LNESLTV LSSCEAEFIAATTAACQALWLRCLVSEIV M+PR
Sbjct: 121 LNESLTVTLSSCEAEFIAATTAACQALWLRCLVSEIVRMKPR 162

[Close]

BLAST of Chy2G036870 vs. NCBI nr
Match: XP_031741734.1 (uncharacterized protein LOC116403928 [Cucumis sativus])

HSP 1 Score: 296 bits (759), Expect = 2.13e-97
Identity = 150/171 (87.72%), Postives = 155/171 (90.64%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           MADCNATKYP+EPKAQL K+ +GAPIDATEYRSIVGCLRYLLNT PDLSYAVGMASRY+E
Sbjct: 144 MADCNATKYPMEPKAQLHKETKGAPIDATEYRSIVGCLRYLLNTRPDLSYAVGMASRYIE 203

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPTTMHYKVVKQIL YLRGTIHFGLTYTKGPREF+IF YSDSDLAGDLDGRKSTSGM FY
Sbjct: 204 RPTTMHYKVVKQILGYLRGTIHFGLTYTKGPREFNIFGYSDSDLAGDLDGRKSTSGMTFY 263

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 162
           LNESL         TVALSSCEAEFIAATTAACQALWLRCLVSEIV MEPR
Sbjct: 264 LNESLVSWNSQKQKTVALSSCEAEFIAATTAACQALWLRCLVSEIVRMEPR 314

[Close]

BLAST of Chy2G036870 vs. NCBI nr
Match: XP_031745072.1 (secreted RxLR effector protein 161-like [Cucumis sativus])

HSP 1 Score: 285 bits (728), Expect = 1.11e-94
Identity = 148/172 (86.05%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGC-LRYLLNTMPDLSYAVGMASRYM 60
           MADCNATKYP+EPKAQL KD E APIDATEYRSIV   L YLLNT PDLSY VGMASRYM
Sbjct: 1   MADCNATKYPMEPKAQLHKDTEEAPIDATEYRSIVVVVLDYLLNTRPDLSYVVGMASRYM 60

Query: 61  ERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAF 120
           ERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREF+IF YSDSDLAGDLDGRKSTSGM F
Sbjct: 61  ERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFNIFGYSDSDLAGDLDGRKSTSGMTF 120

Query: 121 YLNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 162
           YLNESL         TVALSSCE EFIA TTAACQALWLRCLVSEIVGMEPR
Sbjct: 121 YLNESLVSWNSQKQKTVALSSCEVEFIATTTAACQALWLRCLVSEIVGMEPR 172

[Close]

BLAST of Chy2G036870 vs. NCBI nr
Match: XP_038904466.1 (secreted RxLR effector protein 161-like [Benincasa hispida])

HSP 1 Score: 281 bits (720), Expect = 1.15e-93
Identity = 141/171 (82.46%), Postives = 148/171 (86.55%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M DCNATKYP+EPKAQL KDMEGAPIDATEY+SIVGCLRYLLNT PDLSY VGM +RYM+
Sbjct: 1   MDDCNATKYPMEPKAQLHKDMEGAPIDATEYKSIVGCLRYLLNTRPDLSYVVGMTNRYMK 60

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
           RPT MH+KVVKQILRYLRGTIHFGLTY KGPRE DIF Y DSDL GDLDGRKSTSGMAFY
Sbjct: 61  RPTAMHHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYLDSDLVGDLDGRKSTSGMAFY 120

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALWLRCLVSEIVGMEPR 162
           LNESL         TVALSSCEAEF+AAT AACQALWLR LVSE+ GMEPR
Sbjct: 121 LNESLVSWNSQKQKTVALSSCEAEFMAATIAACQALWLRSLVSELTGMEPR 171

[Close]

BLAST of Chy2G036870 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 0


Query: 1   MADCNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYME 60
           M DC     P+  K          P D +++RSIVG L+YL  T PD+SYAV +  + M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  RPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFY 120
            PT   + ++K++LRY++GTI  GL Y     + ++ ++ DSD AG    R+ST+G   +
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 190

Query: 121 LNESL---------TVALSSCEAEFIAATTAACQALW 149
           L  ++         TV+ SS E E+ A    A +  W
Sbjct: 191 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Chy2G036870 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 85.1 bits (209), Expect = 5.7e-17
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 4   CNATKYPIEPKAQLRKDMEGAPIDATEYRSIVGCLRYLLNTMPDLSYAVGMASRYMERPT 63
           C  +  P++P         G  +DA  YR ++G L YL  T  D+S+AV   S++ E P 
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410

Query: 64  TMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSYSDSDLAGDLDGRKSTSGMAFYLNE 123
             H + V +IL Y++GT+  GL Y+    E  +  +SD+      D R+ST+G   +L  
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYS-SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGT 470

Query: 124 SL---------TVALSSCEAEFIAATTAACQALWLRCLVSEI 157
           SL          V+ SS EAE+ A + A  + +WL     E+
Sbjct: 471 SLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFREL 511

[Close]

BLAST of Chy2G036870 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 26/77 (33.77%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 40  YLLNTMPDLSYAVGMASRYMERPTTMHYKVVKQILRYLRGTIHFGLTYTKGPREFDIFSY 99
           YL  T PDL++AV   S++     T   + V ++L Y++GT+  GL Y+    +  + ++
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYS-ATSDLQLKAF 61

Query: 100 SDSDLAGDLDGRKSTSG 117
           +DSD A   D R+S +G
Sbjct: 62  ADSDWASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Chy2G036870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	2.0e-19	41.01	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.5e-19	37.82	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	1.1e-17	40.44	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.3e-17	37.28	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	7.3e-17	34.39	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Chy2G036870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5K0VEQ6	5.2e-58	65.90	Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Nym...	[more]
Q10RM4	1.8e-55	63.01	Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ...	[more]
A0A6G1EJC3	1.2e-54	64.91	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Oryza meyerian...	[more]
Q0J8A6	2.2e-53	61.85	Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE...	[more]
B8BDZ6	2.2e-53	62.57	Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4...	[more]

BLAST of Chy2G036870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742485.1	5.75e-104	90.64	secreted RxLR effector protein 161-like [Cucumis sativus]	[more]
KAE8645998.1	1.01e-99	89.51	hypothetical protein Csa_015477 [Cucumis sativus]	[more]
XP_031741734.1	2.13e-97	87.72	uncharacterized protein LOC116403928 [Cucumis sativus]	[more]
XP_031745072.1	1.11e-94	86.05	secreted RxLR effector protein 161-like [Cucumis sativus]	[more]
XP_038904466.1	1.15e-93	82.46	secreted RxLR effector protein 161-like [Benincasa hispida]	[more]

BLAST of Chy2G036870 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	5.2e-18	34.39	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	5.7e-17	32.10	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	2.7e-06	33.77	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 25..119
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 25..119
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 99..156 e-value: 3.98036E-26 score: 94.4573

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G036870.1	Chy2G036870.1	mRNA