Chy1G018800 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTAATGGACACAACAACAGCCACTTTCAGAACTTTAAACCCATTTATCCCTTTTCAACTACGCTCATCCAGGTCTCTTCATCTTCTTCGCTCTCACTCCTTCTCCCTTTTCACCAACAAACACCACAATCCATCTTCTTCATCCTCCCGCCGGTTACTCCCCTTCTGCTCTTCATGTAAGTATATATGATATATCTGTAATCAAACGTTCTTACATCCTATGGACTCTGTAATCTCTGCTGTGAATTGGGTTGAAGTTATTTTTTTCAGTATGATTTTGCTGTGTTCATGGCGCAGCTGACAGAGTGGAGGGTTCTGGTTCCCTACCGAGCGGTGTTGGTGAGGCCGTCAATGGGGTCTCGCATCCAAAGCTTCTTCAAGTTGTATTGGTGTCTCCCTTGGTAATTGCTTAGTTGATTATTTTTCTTGCTTTTCGTTTCTGCATTTTTTTTTTCTAGTAATCGCTATTTTTAGTTATTTTTTGTGTTCTTATCTATATTTGGTGGAGTTGTATGGCTTGATTTAATCTTTTGAATAAGTTTCACTTTGCTTTAAGGTTTTGTTTGATTGTCAAGGATGGTATTTCATATTATTGGAATTTTTGATCAAATGTAAACCGTACATTTAAGAACTGCAGTCAATTGAGTGGTATGACTTCGAACCTTGGATTGAGCTTAATAAGAAAAAAAACCTATTTGGGAGATTGAAATGTTTAATTCGGTGTTAAATTGGGATTGTGAAACAGGAAAAATGGGAGAAAGAGAGTTGAGTTGAAAATAATGGAAAAGGAATATAGAAGGAGTTACACACCAGGCTCAAAACCCTAACCATCAAATTCTAGCTTCCCAAACATGTTCCTTCAATCTAGGCATTGGGTTAGACTCGAGCTTGGTTGCCCCCGAATTAATGGGGCTAAGGCCCTCGATACCGGGTTACTAAAACATAGAGGGTAGCTTTTCCAAGATTCTGGATTTTTTTAAATTAGTGTATTTCAGATATGCTCAAATTGCCCCTATGTAGCCACAAACCAAAGAAATTCAGAGGATATTAGCACATGGAAATTTGCTGACATTCTACTTGGTGTTTTGTTTCAAACCGAATGAATAAGGACTAGGGAGCCTTTAGTTAGATATTTGCATCAATCTCTGTGGTGTGCACAAGGTTCATGGTAAAATAGAGATCTTAGGTGGTATTCTTAGATGACTAACAAGTTGAAATAAGTAGAGCTGCTTGGAAACAGTCTTCTTCAAGTCGAAATGTGAGGGTTGAGCAAACCCTCTCGTAGAAATTTTAATAGATTGCTCGAAAACTTGCGAGACATATTATGGTTGTTTATGTCATATAGAGCGAAAGGTCATGTGATGTTAATCGTAAACTTTTATTTTGGTTAATATCAAATGCTTGTAGCATATTTCTTCCAAATTGATTTCTACTTCTAATGAAATACACACTCCACATTGTGTGTACACATACGGCACCGCTTATCAGTTTGTATATCACGGCACACGTTGTATGCAGTTGTGTGAAACGCGGTGAACGCCCAATTGTAATTTCTCCATTTTCGTTTTTGGGTTGCAGACAACCTCAAAATTCCTCAAGGATGGCTCTGAGATTTGTGTTGTCCTTGGCAGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTAGGACTACATCTAGTTGGGGTTAGTATTGTAACGTCTTTACTTCAAGCATAATCGTTCTGACTTTAATAACTTATCCGCTTGTATTGTCTCCTTCTCAGCCATTGGGATTTAAGGTTGATGACACAAAGCTAAAGCGGGCGGGTTTGGATTATTGGCCGTATCCCATGATGCATTTTATATATGATTCGTTTGCTCTCATTTACAGTTAAATATCAGGGATTCAATATTAGGAAATTGTGCTTTACTTTGTCTTGAACTGTTTGAGTTTTCTATTTCGTGCTGTCACTGTTCGTTCAATGTTTTTGGGTTTTAACATTGTATTTTAGATACGTTGTCGTTAAAATTCATAACACATGGGCGGATTTTCAAGAATACTTTAAGAAGCAGGTAAGCATGGACAAGATTCCATTTTAGTTTCCTCTTTGCATCCTACATTGTTGGAAACTATGTCTACCAACTCAATGATATGTACAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAAAGAGGAACAACACATCATTCGGTGAGTGCCTATTTCTCTGATGATTTGATTTCTATACGAGTCGTCGATTGCTCATAGGCCAGGAGGAATTTTGAGTAACAATTTGTTTTCTCATTTCATTTCTGCAGGATTTTTCGTACAAGCGGGGGGATTACTTGTTGTTCGGCTCAGAAACTACTGGATTACCACCTGAAGCGCTTGAGGACTGCAAAAACCAGCCATTTGGTGGAGGGACATTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTCTCGGTGAGTGTTGGTATTGCTATATACGAAGCTTCAAGACAACTAAATTACGAGCAACTTCAGGTTTCATCAGAGAGTTGTACTAACAATGAACAATCTATTATTACAGAGGATGTTTTTGCTTGA ATGCCGTTAATGGACACAACAACAGCCACTTTCAGAACTTTAAACCCATTTATCCCTTTTCAACTACGCTCATCCAGGTCTCTTCATCTTCTTCGCTCTCACTCCTTCTCCCTTTTCACCAACAAACACCACAATCCATCTTCTTCATCCTCCCGCCGGTTACTCCCCTTCTGCTCTTCATCTGACAGAGTGGAGGGTTCTGGTTCCCTACCGAGCGGTGTTGGTGAGGCCGTCAATGGGGTCTCGCATCCAAAGCTTCTTCAAGTTGTATTGGTGTCTCCCTTGACAACCTCAAAATTCCTCAAGGATGGCTCTGAGATTTGTGTTGTCCTTGGCAGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTATACGTTGTCGTTAAAATTCATAACACATGGGCGGATTTTCAAGAATACTTTAAGAAGCAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAAAGAGGAACAACACATCATTCGGATTTTTCGTACAAGCGGGGGGATTACTTGTTGTTCGGCTCAGAAACTACTGGATTACCACCTGAAGCGCTTGAGGACTGCAAAAACCAGCCATTTGGTGGAGGGACATTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTCTCGGTGAGTGTTGGTATTGCTATATACGAAGCTTCAAGACAACTAAATTACGAGCAACTTCAGGTTTCATCAGAGAGTTGTACTAACAATGAACAATCTATTATTACAGAGGATGTTTTTGCTTGA ATGCCGTTAATGGACACAACAACAGCCACTTTCAGAACTTTAAACCCATTTATCCCTTTTCAACTACGCTCATCCAGGTCTCTTCATCTTCTTCGCTCTCACTCCTTCTCCCTTTTCACCAACAAACACCACAATCCATCTTCTTCATCCTCCCGCCGGTTACTCCCCTTCTGCTCTTCATCTGACAGAGTGGAGGGTTCTGGTTCCCTACCGAGCGGTGTTGGTGAGGCCGTCAATGGGGTCTCGCATCCAAAGCTTCTTCAAGTTGTATTGGTGTCTCCCTTGACAACCTCAAAATTCCTCAAGGATGGCTCTGAGATTTGTGTTGTCCTTGGCAGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTATACGTTGTCGTTAAAATTCATAACACATGGGCGGATTTTCAAGAATACTTTAAGAAGCAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAAAGAGGAACAACACATCATTCGGATTTTTCGTACAAGCGGGGGGATTACTTGTTGTTCGGCTCAGAAACTACTGGATTACCACCTGAAGCGCTTGAGGACTGCAAAAACCAGCCATTTGGTGGAGGGACATTAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTCTCGGTGAGTGTTGGTATTGCTATATACGAAGCTTCAAGACAACTAAATTACGAGCAACTTCAGGTTTCATCAGAGAGTTGTACTAACAATGAACAATCTATTATTACAGAGGATGTTTTTGCTTGA MPLMDTTTATFRTLNPFIPFQLRSSRSLHLLRSHSFSLFTNKHHNPSSSSSRRLLPFCSSSDRVEGSGSLPSGVGEAVNGVSHPKLLQVVLVSPLTTSKFLKDGSEICVVLGRFLGTLVALPEHVLHQLYVVVKIHNTWADFQEYFKKQEGEKRLLAFTKRGTTHHSDFSYKRGDYLLFGSETTGLPPEALEDCKNQPFGGGTLRIPMVETYVRCLNLSVSVGIAIYEASRQLNYEQLQVSSESCTNNEQSIITEDVFA* Homology
BLAST of Chy1G018800 vs. ExPASy Swiss-Prot
Match: P0AGJ8 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=trmL PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy Swiss-Prot
Match: P0AGJ7 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=trmL PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy Swiss-Prot
Match: P44868 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=trmL PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.8e-12 Identity = 43/107 (40.19%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy Swiss-Prot
Match: C7BSD3 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) OX=553480 GN=trmL PE=3 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11 Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy Swiss-Prot
Match: B8CHC9 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) OX=225849 GN=trmL PE=3 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 3.2e-11 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy TrEMBL
Match: A0A5D3CFA4 (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001000 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113 Identity = 221/268 (82.46%), Postives = 228/268 (85.07%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy TrEMBL
Match: A0A1S3CFJ1 (putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103499907 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113 Identity = 221/268 (82.46%), Postives = 228/268 (85.07%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy TrEMBL
Match: A0A0A0K6L9 (SpoU_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428850 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.6e-112 Identity = 221/268 (82.46%), Postives = 226/268 (84.33%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy TrEMBL
Match: A0A6J1KVT5 (uncharacterized protein LOC111498049 OS=Cucurbita maxima OX=3661 GN=LOC111498049 PE=3 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 5.2e-89 Identity = 187/270 (69.26%), Postives = 208/270 (77.04%), Query Frame = 0
BLAST of Chy1G018800 vs. ExPASy TrEMBL
Match: A0A6J1H4X6 (uncharacterized protein LOC111460609 OS=Cucurbita moschata OX=3662 GN=LOC111460609 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.9e-89 Identity = 188/271 (69.37%), Postives = 213/271 (78.60%), Query Frame = 0
BLAST of Chy1G018800 vs. NCBI nr
Match: XP_008461270.1 (PREDICTED: putative tRNA (cytidine(34)-2'-O)-methyltransferase [Cucumis melo]) HSP 1 Score: 419 bits (1077), Expect = 5.64e-146 Identity = 221/268 (82.46%), Postives = 229/268 (85.45%), Query Frame = 0
BLAST of Chy1G018800 vs. NCBI nr
Match: KAA0058644.1 (putative tRNA (cytidine(34)-2'-O)-methyltransferase [Cucumis melo var. makuwa] >TYK10451.1 putative tRNA (cytidine(34)-2'-O)-methyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 419 bits (1077), Expect = 3.11e-145 Identity = 221/268 (82.46%), Postives = 229/268 (85.45%), Query Frame = 0
BLAST of Chy1G018800 vs. NCBI nr
Match: XP_004135918.1 (uncharacterized protein LOC101203702 [Cucumis sativus] >KGN45148.1 hypothetical protein Csa_016173 [Cucumis sativus]) HSP 1 Score: 416 bits (1069), Expect = 9.33e-145 Identity = 221/268 (82.46%), Postives = 227/268 (84.70%), Query Frame = 0
BLAST of Chy1G018800 vs. NCBI nr
Match: XP_038898778.1 (putative tRNA (cytidine(34)-2'-O)-methyltransferase isoform X2 [Benincasa hispida]) HSP 1 Score: 373 bits (957), Expect = 1.12e-127 Identity = 205/270 (75.93%), Postives = 216/270 (80.00%), Query Frame = 0
BLAST of Chy1G018800 vs. NCBI nr
Match: XP_038898777.1 (putative tRNA (cytidine(34)-2'-O)-methyltransferase isoform X1 [Benincasa hispida]) HSP 1 Score: 365 bits (937), Expect = 1.70e-124 Identity = 204/279 (73.12%), Postives = 217/279 (77.78%), Query Frame = 0
BLAST of Chy1G018800 vs. TAIR 10
Match: AT5G26880.2 (AGAMOUS-like 26 ) HSP 1 Score: 224.9 bits (572), Expect = 7.3e-59 Identity = 115/199 (57.79%), Postives = 141/199 (70.85%), Query Frame = 0
BLAST of Chy1G018800 vs. TAIR 10
Match: AT5G26880.1 (AGAMOUS-like 26 ) HSP 1 Score: 172.2 bits (435), Expect = 5.6e-43 Identity = 90/160 (56.25%), Postives = 108/160 (67.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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