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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATTTGTTTCCTAAAGCTCGGTATGGAGCATTACAACAAGGAGATATTCAAGAAAATTGTGGAAGCCATTGGCGTTTGTCTTGTGAAAATCAACCCGACAACTGAAAGAAGACAAAATATACTGCATTAGGATTACTTTAAGAAATCCCTTTATTTACTATAACCACGTTGAGCAAAATCTGCAGGACATTGTATAGGAGGGTTTAGATTGTTTGTGCTCTGTTGGTAGATGTGTTTATTAGGAGTGTAAGAATAACCTTACAACCTGAATAACCCCTGCTATCCAACACATATGCTTTTGTTGGGTTGGGTTAAAAAAATTGGATTTTTTTAGATTGATTAGATCTTGAATTGGAGGATAAAAAAATTCGGTTTAAATTAACCTAACCCAAATTAATATAATATATATTACTTATTTAATAAAAAAGAAAATTATGTAGATGTTGTGTCATCAAATTGGGTCACCAAATTTAATTTTCCCTTGTTCTTTATGTTTTTATGTAATTCCGTAGTTGTTCTTTTTGTTATTAACTCCCGATACAACAAACAGTACAATAACTAAGTGTATGTTTTCTCACCATTGATTCATTATATACTACCTTCATCAGAATCAGCATTGGGATCTAAATCCAAGAAAAAGACCAATTTCTTGAGTTGAAATTGAAGGACTGTCCAAAAGCTTAAGTTGAAAAGAAAATTTTGCCAAACTTTCCAAAAGAATCTTAAACTACAACCATGAAAACTTCTGAGTTTATGCCTTTAACTACTTTTTTTTTTTTTGTTGCAGGTCACTTCAAAGCTGCAAAAGATAGTAGCCCTACAAGGCTTGTAGTTCTTAACTATGTATCACATTCATCATCTGCTGTTGAGGTTGGCCTCAATTTCTTTTCAAATGTGATACAACAAACCACAACTAGAAAAAGATGA mRNA sequence ATGGATTTGTTTCCTAAAGCTCGGTATGGAGCATTACAACAAGGAGATATTCAAGAAAATTGTGGAAGCCATTGGCGTCACTTCAAAGCTGCAAAAGATAGTAGCCCTACAAGGCTTGTAGTTCTTAACTATGTATCACATTCATCATCTGCTGTTGAGGTTGGCCTCAATTTCTTTTCAAATGTGATACAACAAACCACAACTAGAAAAAGATGA Coding sequence (CDS) ATGGATTTGTTTCCTAAAGCTCGGTATGGAGCATTACAACAAGGAGATATTCAAGAAAATTGTGGAAGCCATTGGCGTCACTTCAAAGCTGCAAAAGATAGTAGCCCTACAAGGCTTGTAGTTCTTAACTATGTATCACATTCATCATCTGCTGTTGAGGTTGGCCTCAATTTCTTTTCAAATGTGATACAACAAACCACAACTAGAAAAAGATGA Protein sequence MDLFPKARYGALQQGDIQENCGSHWRHFKAAKDSSPTRLVVLNYVSHSSSAVEVGLNFFSNVIQQTTTRKR*
Homology
BLAST of Chy12G214180 vs. ExPASy TrEMBL
Match: A0A5A7SY10 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00450 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06 Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 28 FKAAKDSSPTRLVVLNYVSHSSSAVEVGLNFFSNVIQQTTTRKR 72
F+AAK SSPT+L VLN VSHSSSAVE G+N FS IQQT T K+
Sbjct: 376 FRAAKGSSPTKLPVLNNVSHSSSAVEAGINSFSCAIQQTITEKK 419
BLAST of Chy12G214180 vs. NCBI nr
Match: KAA0034059.1 (hypothetical protein E6C27_scaffold65G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 1.22e-08 Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 28 FKAAKDSSPTRLVVLNYVSHSSSAVEVGLNFFSNVIQQTTTRKR 71
F+AAK SSPT+L VLN VSHSSSAVE G+N FS IQQT T K+
Sbjct: 376 FRAAKGSSPTKLPVLNNVSHSSSAVEAGINSFSCAIQQTITEKK 419
BLAST of Chy12G214180 vs. NCBI nr
Match: KAA0034060.1 (hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 49.7 bits (117), Expect = 1.07e-04 Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 0
Query: 28 FKAAKDSSPTRLVVLNYVSHSSSAVEVGLNFFSNVIQQTTTRK 70
F+AAK S PT+L + N S SSSAVE GLN FS V QQ TT K
Sbjct: 476 FRAAKASCPTKLALHNNGSRSSSAVEAGLNLFSTVSQQLTTVK 518
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5A7SY10 | 2.6e-06 | 70.45 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0034059.1 | 1.22e-08 | 70.45 | hypothetical protein E6C27_scaffold65G00450 [Cucumis melo var. makuwa] | [more] |
| KAA0034060.1 | 1.07e-04 | 62.79 | hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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