Chy12G213310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G213310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DUF3128 domain-containing protein
Location	chrH12: 11057589 .. 11059938 (-)
RNA-Seq Expression	Chy12G213310
Synteny	Chy12G213310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGTAGAGAATATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTGTATGCAACTTTATTTTCAACTTTTTGATATTATTTTCATAATTTCATGTTACTTACCCTTTACTTTTGCAATGTGTACCCCTAATCACTAGCAAATTTGATTTGTCTGCCATCTTCTTGTTTATAGGCAAGAATAATAAAATAGACCTAGCAAACGAGGAATCCCTTAGTCGTTTGATTGGCGAATGTAGTAGAGTACGATAATGTTTAAGCCAAGTCCATGAATGAAGTTGCTTGCCTTTTGCGAACTATTAGTGGTTCTCCATGCTCTATCGTATCTACTAAAACTGGTTCATCAATCTACTAAAATAGCTCTTTTTTTGTTAGGCCAACAGTTACTTTACAGAGCTAATTTTATTATTTGCATGGTGTTTTTGCACCCACCCTTTGGTTTTACGGTGTTCTTGCCCTTCTTTGGAGGCTTTGGTTTTGAGGAAATGCTATGATTTTTTGGTGTTCAAGATTCTAACTGGGATAGTTTTTGCTTTTTGCTTCTACTGAGTCCTCTACTTTATTTATTTATTGTAACTACAGCCTACCTAACTCAGATTTACACCAGTTGAGCCTCTTTTTTGTAACCTGTTTGCGTCTGGAGACTGGAGATATCGTATCTCCTCTCTTTTTAGTTGATAAAATGCACACTAGTTCTGGATTTATTTCTTGGATTGTGATAATTGGATTTTAAACTTACAATTTAATGATTTTTACTTTTAGCCTTTTGCCATTAGTTAGTTAATTGGAGAGTTTTTTTTTTGAAGTTTACATATCAATTAAGGAAGAGGATTAATGTCTTTTAACTTCTGAAATGTTTTTAGGTTTTTCATTTTTCCAACTAGTTCGCATGTCCCTTATTCTCCAAACCAGTTCAATTTCTTTTTTCATTGTTGTCAATTTTTTTTAAAAAAATTGACTAATCGTTGCTGAAACTATCTGATACTCATATTCACACCTAATTTTTGCTATCGTAGACCTCCTTTTCCATATTGACGAGGTCATCTTTGGACCTAATTGTTAACTTATAGATCTAATGGTTACATTTACTGGCAGCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGTATTTATCTAATACAAAAATACCTTCAGGGCCATATAGTTTATATATTTCAAGAATGCTGAAATCTTGCCGTTCTTCATTCTATGTTGCATTAAAAAAATTGAATAGCTCGGATCTGTGAATGGTAGGGGAGCTTTCAAATGACCAAAGCTTTTAGACTTTAGTAATTGGAGGGTCTATCAGCTCTCCTAGGAATTATTTTTTGGTCCTTGATATGACCTTTTTTACCACATCGATGTTAAGTTTTAATTAACAATATATAATAAACCAATTCGAGTAGGCAAAGGTCTCCCTCTGTGATGTACTAACCACAGCACAACTCACAAAAGCCTCCCCCGAAAATACACTAGAAGCTAACTAAATAACCAAACTAAAAAGGCAAAATAAACAGCAAACAAGTACAGCACTTAAGTGGGGGGATTCTCATTTCTCTACCTCTACTAACATATGTATTAACAATTGAAGGCTTGACATGCTTTTGTCTATAATAATAAGTAAATGACAACAAAGATGTTGAGGTGGTTGTTTCTTTAGTTTCTGGGGATGGATTCTTAATGAGGAATAATAACATTCATGTTTTACATACAAACCAATAGGAACTTCTTTTTCTTATTTTTTTTTCACCTGAAAAGAAAAAGAAAAAGAAAGAAGTACACACGCATATATATATAGTTTGTTTTTAGATATAGGAAAATGAACTAAAATATTTACAAATATGGCAAAATATCACTTACACTATCATCTAAAACACTAATAGATGTCTAATTGAGCGAAATTTTGTTATATTTGTAAGGATTTTCAGCAGTTATCATTTAAAACAATGGACCATTTGGAAGTCCGTTAGCTAGCTTACACCGGGTCTTGTTTCTTCCCAATCAGATTACTTTTTTATAGTTTACTTTACAAGTACTTGGAATGCCCTTTCTTTTTTTTTTTTCCTTAAAAAAATGTACTTGGAATGCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGGCTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAGGAACTATTCGGACATTTAGAAGAAATAGAATGA

mRNA sequence

ATGGAAGGAGTAGAGAATATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGGCTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAGGAACTATTCGGACATTTAGAAGAAATAGAATGA

Coding sequence (CDS)

ATGGAAGGAGTAGAGAATATAACACCTGAGAAACAGAATAACACCATGGGATCGAGGAAGCGGTTGTCCTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCGGTTCATCAGATGCAGCAATACTACAGGGTTGGAGTTTTTGATAACTGTTCTAACAAATGGACAGCTCTTGTTGACTGTTTAACTCTAAAGACGAAAAGAGCTTCTGAGGTTCAGGAAATTCTTGAAAGCAGAGAAAAAGCAAAATCTCACATCTGGGCTTTTCGAACCCCAGAAGAAGCATCATCACATTGGAAGGAACTATTCGGACATTTAGAAGAAATAGAATGA

Protein sequence

MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTALVDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE*

Homology

[Close]

BLAST of Chy12G213310 vs. ExPASy TrEMBL
Match: A0A0A0LSX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.3e-59
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE+ITPEKQNNT+GSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL
Sbjct: 1   MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 113
           VDCLTLKTKRASEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEEIE
Sbjct: 61  VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of Chy12G213310 vs. ExPASy TrEMBL
Match: A0A1S3CG12 (uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVENIT EKQNN+MG ++RLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCS+KWTAL
Sbjct: 1   MEGVENITTEKQNNSMGPKRRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSSKWTAL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 113
           +DCL LKTKRASEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEEIE
Sbjct: 61  LDCLNLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of Chy12G213310 vs. ExPASy TrEMBL
Match: A0A6J1HJL4 (uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC111464679 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE ITPEKQ+N+MGSR+RLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS+KWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 113
           +DCL LKTKRASEVQEILESREKAKSHIW FRTP EASSHWKELFG L+E+E
Sbjct: 61  IDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 112

[Close]

BLAST of Chy12G213310 vs. ExPASy TrEMBL
Match: A0A6J1I2M7 (uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE ITPEKQ+N+MGSR+RLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS+KWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 113
           +DCL LKTKRASEVQEILESREKAKSHIW FRTP EASSHWKELFG L+E+E
Sbjct: 61  LDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 112

[Close]

BLAST of Chy12G213310 vs. ExPASy TrEMBL
Match: A0A6J1DHI6 (uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           ME VE +TPEK++   G R RLSCTTCFDALWFCYSPVHQMQQYYR+GVFDNCS+KWTAL
Sbjct: 1   MEXVEKLTPEKEDKPTGLRGRLSCTTCFDALWFCYSPVHQMQQYYRLGVFDNCSDKWTAL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 113
           VDCL+LKTKRASEVQEILESREKAKSHIW FRTPEE+SSHWK+LFGHL+E+E
Sbjct: 61  VDCLSLKTKRASEVQEILESREKAKSHIWTFRTPEESSSHWKQLFGHLDEME 112

[Close]

BLAST of Chy12G213310 vs. NCBI nr
Match: XP_004139465.1 (uncharacterized protein C227.17c [Cucumis sativus])

HSP 1 Score: 235 bits (600), Expect = 3.32e-78
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE+ITPEKQNNT+GSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL
Sbjct: 1   MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 112
           VDCLTLKTKRASEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEEIE
Sbjct: 61  VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of Chy12G213310 vs. NCBI nr
Match: KAE8652796.1 (hypothetical protein Csa_022703 [Cucumis sativus])

HSP 1 Score: 235 bits (600), Expect = 1.51e-76
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE+ITPEKQNNT+GSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL
Sbjct: 116 MEGVESITPEKQNNTLGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 175

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 112
           VDCLTLKTKRASEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEEIE
Sbjct: 176 VDCLTLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 227

[Close]

BLAST of Chy12G213310 vs. NCBI nr
Match: XP_008462029.1 (PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo] >XP_008462037.1 PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo])

HSP 1 Score: 224 bits (572), Expect = 6.22e-74
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVENIT EKQNN+MG ++RLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCS+KWTAL
Sbjct: 1   MEGVENITTEKQNNSMGPKRRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSSKWTAL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 112
           +DCL LKTKRASEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEEIE
Sbjct: 61  LDCLNLKTKRASEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEIE 112

[Close]

BLAST of Chy12G213310 vs. NCBI nr
Match: XP_038875103.1 (uncharacterized protein LOC120067633, partial [Benincasa hispida])

HSP 1 Score: 228 bits (581), Expect = 1.29e-73
Identity = 104/112 (92.86%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVENITPEKQNN+MGSR+RLSCTTCFDALWFCYSPVHQMQQYYR+GVFDNCS+KWTAL
Sbjct: 119 MEGVENITPEKQNNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGVFDNCSDKWTAL 178

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 112
           VDCL LKTKR SEVQEILESREKAKSHIW FRTPEEASSHWKELFGHLEE+E
Sbjct: 179 VDCLNLKTKRTSEVQEILESREKAKSHIWTFRTPEEASSHWKELFGHLEEME 230

[Close]

BLAST of Chy12G213310 vs. NCBI nr
Match: XP_022964668.1 (uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964670.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964671.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >KAG7019308.1 hypothetical protein SDJN02_18268, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215 bits (547), Expect = 4.05e-70
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MEGVENITPEKQNNTMGSRKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTAL 60
           MEGVE ITPEKQ+N+MGSR+RLSCTTCFDALWFCYSPVHQMQQYYR+G FDNCS+KWT+L
Sbjct: 1   MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSL 60

Query: 61  VDCLTLKTKRASEVQEILESREKAKSHIWAFRTPEEASSHWKELFGHLEEIE 112
           +DCL LKTKRASEVQEILESREKAKSHIW FRTP EASSHWKELFG L+E+E
Sbjct: 61  IDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME 112

[Close]

BLAST of Chy12G213310 vs. TAIR 10
Match: AT4G25315.2 (Expressed protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-33
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 19  RKRLSCTTCFDALWFCYSPVHQMQQYYRVGVFDNCSNKWTALVDCLTLKTKRASEVQEIL 78
           R+R+SCT CFDALWFCYSP +QMQQYYRVG  D+C+ K++ L DCL+LKTKRASE + IL
Sbjct: 12  RRRVSCTKCFDALWFCYSPFYQMQQYYRVGKLDDCTKKFSDLFDCLSLKTKRASEAERIL 71

Query: 79  ESREK--AKSHIWAFRTPEEASSHWKELFGHLEE 111
           E +EK  A+ HIW  RT EEA SHW E FGHLE+
Sbjct: 72  EEQEKAAAEKHIWIMRTQEEAVSHWNETFGHLED 105

[Close]

BLAST of Chy12G213310 vs. TAIR 10
Match: AT4G25315.1 (Expressed protein )

HSP 1 Score: 127.5 bits (319), Expect = 6.9e-30
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 19  RKRLSCTTCFDALWFCY-------------------SPVHQMQQYYRVGVFDNCSNKWTA 78
           R+R+SCT CFDALWFCY                   +P +QMQQYYRVG  D+C+ K++ 
Sbjct: 12  RRRVSCTKCFDALWFCYWMSRWSNITSNGDDTGNDLAPFYQMQQYYRVGKLDDCTKKFSD 71

Query: 79  LVDCLTLKTKRASEVQEILESREK--AKSHIWAFRTPEEASSHWKELFGHLEE 111
           L DCL+LKTKRASE + ILE +EK  A+ HIW  RT EEA SHW E FGHLE+
Sbjct: 72  LFDCLSLKTKRASEAERILEEQEKAAAEKHIWIMRTQEEAVSHWNETFGHLED 124

The following BLAST results are available for this feature:

BLAST of Chy12G213310 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G213310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSX6	9.3e-59	97.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1	[more]
A0A1S3CG12	1.6e-55	91.96	uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=...	[more]
A0A6J1HJL4	1.3e-52	86.61	uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC1114646...	[more]
A0A6J1I2M7	2.2e-52	86.61	uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344...	[more]
A0A6J1DHI6	1.2e-50	83.93	uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 ...	[more]

BLAST of Chy12G213310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139465.1	3.32e-78	97.32	uncharacterized protein C227.17c [Cucumis sativus]	[more]
KAE8652796.1	1.51e-76	97.32	hypothetical protein Csa_022703 [Cucumis sativus]	[more]
XP_008462029.1	6.22e-74	91.96	PREDICTED: uncharacterized protein LOC103500495 [Cucumis melo] >XP_008462037.1 P...	[more]
XP_038875103.1	1.29e-73	92.86	uncharacterized protein LOC120067633, partial [Benincasa hispida]	[more]
XP_022964668.1	4.05e-70	86.61	uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 unchar...	[more]

BLAST of Chy12G213310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25315.2	1.0e-33	67.02	Expressed protein	[more]
AT4G25315.1	6.9e-30	54.87	Expressed protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021475	Protein of unknown function DUF3128	PFAM	PF11326	DUF3128	coord: 21..92 e-value: 1.3E-29 score: 102.3
IPR021475	Protein of unknown function DUF3128	PANTHER	PTHR28052	UPF0545 PROTEIN C22ORF39	coord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G213310.1	Chy12G213310.1	mRNA