Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTATGTTAAGCATCCCCCTATCCCTTCTCGTGTCCAACAACACCATTCTTCTTCTCGAGACAACAATTGCCCCACCGCATCTACGGAGCAACCAACTGAGCCCAATAGATTTTGAGCGACTTTATTACAACCAACATCTACAATGCCTAGAAGCCATATTGGATAAGATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGTATGATTGTCTTCAAGTTTTCCTATTTCTTGTTTTTGTTTTATTTAAGGAGTAATAATGGTGTTTCTATTGCTTCGTTAATAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA
mRNA sequence
GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTACCATTCTTCTTCTCGAGACAACAATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA
Coding sequence (CDS)
GCACTCATAAAGGAGATTGATCCAATGGATGACGAGCGTGCTTACCTGGATAGAAGTCTTGAAATTTCGACGGCAAAAGGTTACATGGAAGGCCCACCTGCCCTTACTTCTCATTATGTCGAGTATGCCCTTGCATGTACTTATGTCGATCTTCCCTTGCTGCTCCTTAATTACCATTCTTCTTCTCGAGACAACAATGAATGAGTTCTTAGACTGAAATGCAGTCATCCTTTACAGCTAAGTTATCGGCCATAAATGAGCTTTTGATGGTCTTAGTTAAGGACAAGGCGGTTGACTCCCAACAATACTATGGTGGTGGTGAAGTTCGTCGTTTAATGCACCGGAGGTTCAGAATAGAGTGGACGATGTATTCATGGATGTTCCCACTCCGGACATTGATGACCAGAACGTTGACGACAAGACAGGAACATCAATCAGTGAAGATCCTGGAGATGATATCATATCGATCA
Protein sequence
ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNYHSSSRDNNE*VLRLKCSHPLQLSYRP*MSF*WS*LRTRRLTPNNTMVVVKFVV*CTGGSE*SGRCIHGCSHSGH**PER*RQDRNINQ*RSWR*YHIDX
Homology
BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match:
A0A0A0M3R6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 4.6e-16
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNY 59
ALIKEIDP DE AYLDRSLEIS A+ Y+EGPPALTSHYV+YALA TYVDLPLLLL +
Sbjct: 2 ALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMF 59
BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match:
A0A5D3E0W4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00620 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLL 57
A I+EID MDDE AYLD S+EI T +GYME P H VE+ +A T+V+ PLLLL
Sbjct: 45 ARIEEIDLMDDEHAYLDWSIEIPTIEGYMENPFTSIPHCVEHPIAHTHVEHPLLLL 100
BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match:
A0A5D3CK53 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00740 PE=3 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 9.7e-06
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 45
A I+EIDP DDE AYLD+S+EI T +GY+E PPA SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69
BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match:
A0A5A7TM91 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00180 PE=3 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 9.7e-06
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 45
A I+EIDP DDE AYLD+S+EI T +GY+E PPA SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69
BLAST of Chy12G211210 vs. ExPASy TrEMBL
Match:
A0A5D3E6H1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00680 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.4e-04
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query: 3 IKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLP 53
+K IDP +DERAY+ RS EI KGY EGP L H+VE+A +VD P
Sbjct: 37 LKRIDPKNDERAYVYRSFEIPKTKGYEEGPHDLAPHHVEHAPTRIHVDHP 86
BLAST of Chy12G211210 vs. NCBI nr
Match:
KAE8653658.1 (hypothetical protein Csa_023635, partial [Cucumis sativus])
HSP 1 Score: 95.5 bits (236), Expect = 1.42e-21
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLLNYHS 60
ALIKEIDP DE AYLDRSLEIS A+ Y+EGPPALTSHYV+YALA TYVDLPLLLL +
Sbjct: 1 ALIKEIDPTYDEHAYLDRSLEISRAESYVEGPPALTSHYVKYALAYTYVDLPLLLLMFTI 60
Query: 61 SSRDN--NE*VLRLKCSHPLQLS 81
+ NE + R++ S +LS
Sbjct: 61 FLLETTMNEFLDRMQSSFTAKLS 83
BLAST of Chy12G211210 vs. NCBI nr
Match:
KAA0043285.1 (hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK29349.1 hypothetical protein E5676_scaffold129G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 62.4 bits (150), Expect = 5.01e-08
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPLLLL 56
A I+EID MDDE AYLD S+EI T +GYME P H VE+ +A T+V+ PLLLL
Sbjct: 45 ARIEEIDLMDDEHAYLDWSIEIPTIEGYMENPFTSIPHCVEHPIAHTHVEHPLLLL 100
BLAST of Chy12G211210 vs. NCBI nr
Match:
KAA0043156.1 (hypothetical protein E6C27_scaffold110G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 59.3 bits (142), Expect = 2.27e-07
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 44
A I+EIDP DDE AYLD+S+EI T +GY+E PPA SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69
BLAST of Chy12G211210 vs. NCBI nr
Match:
TYK12307.1 (hypothetical protein E5676_scaffold302G00740 [Cucumis melo var. makuwa])
HSP 1 Score: 59.3 bits (142), Expect = 3.27e-07
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 1 ALIKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYAL 44
A I+EIDP DDE AYLD+S+EI T +GY+E PPA SH+VE +L
Sbjct: 26 ARIQEIDPTDDEHAYLDQSVEIPTTEGYVEDPPAPISHHVERSL 69
BLAST of Chy12G211210 vs. NCBI nr
Match:
KAA0048759.1 (hypothetical protein E6C27_scaffold43G00670 [Cucumis melo var. makuwa] >TYK31574.1 hypothetical protein E5676_scaffold172G00680 [Cucumis melo var. makuwa])
HSP 1 Score: 58.2 bits (139), Expect = 1.07e-06
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 0
Query: 3 IKEIDPMDDERAYLDRSLEISTAKGYMEGPPALTSHYVEYALACTYVDLPL--LLLNYHS 62
+K IDP +DERAY+ RS EI KGY EGP L H+VE+A +VD P + +
Sbjct: 37 LKRIDPKNDERAYVYRSFEIPKTKGYEEGPHDLAPHHVEHAPTRIHVDHPPDPPHIKHLP 96
Query: 63 SSRDNNE*VL----RLKCSHPLQLSYRP*MSF*WS*LRTRRLTPNNTMVVVK 108
+ ++ +L ++ ++ P S W+ RRLTPNN M +VK
Sbjct: 97 TPVVSSSLILLFGTKVAPIASIEQPTEPNRS--WA--MVRRLTPNNVMTMVK 144
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0M3R6 | 4.6e-16 | 81.03 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701370 PE=4 SV=1 | [more] |
| A0A5D3E0W4 | 1.1e-06 | 58.93 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CK53 | 9.7e-06 | 63.64 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7TM91 | 9.7e-06 | 63.64 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5D3E6H1 | 2.4e-04 | 54.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8653658.1 | 1.42e-21 | 63.86 | hypothetical protein Csa_023635, partial [Cucumis sativus] | [more] |
| KAA0043285.1 | 5.01e-08 | 58.93 | hypothetical protein E6C27_scaffold110G001770 [Cucumis melo var. makuwa] >TYK293... | [more] |
| KAA0043156.1 | 2.27e-07 | 63.64 | hypothetical protein E6C27_scaffold110G00180 [Cucumis melo var. makuwa] | [more] |
| TYK12307.1 | 3.27e-07 | 63.64 | hypothetical protein E5676_scaffold302G00740 [Cucumis melo var. makuwa] | [more] |
| KAA0048759.1 | 1.07e-06 | 36.61 | hypothetical protein E6C27_scaffold43G00670 [Cucumis melo var. makuwa] >TYK31574... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
