Chy12G209340 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G209340
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription initiation factor TFIID subunit 15b-like
Location	chrH12: 3572206 .. 3575701 (+)
RNA-Seq Expression	Chy12G209340
Synteny	Chy12G209340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCCTACGGAGCCCCTGGAGGCGGTGGATACGGAGGCGGTGGTGGAGCAGGCTATGGTGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGGGGCGGCGGCGGCGGTGGTAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCGGAGGCTATGGTGGTCGTGGTATGTACTTCTCTTTTGTCATTCGATTTGTTACTATTAATATTTTATCTTAATCGTTTAGTGACAAGAATCTTTGGGGAAAAGGAAGTTCATTGTTTTCAATAAAATTATGATTTTTATCCTTTACTTTTAATTCTTGTTGGGATCACTTTCGTTTTGTTCTGTTGGTTCGATGACACTATTGCTCTGTAGTGCTTCGGAAAGGTTCATTTCTTGCTATTGGGTGGGGTGTCTGACTTGTATTTGTTAAGTAAATTTCCTGCGATCGGATCTAACTGTGAAGCTAACATTGGATTGTTTTTTGTCTTTTGTTTTCCCCTAAAGACTTACATGTTCTTCCTCGTCTCGGTTTCTTTATTTTCCTTTTTGTTTTGATTTAAATTAGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGGTAGGTTTTTTCCCCCTCTTCATCTACTGTTTGATTCTTTTGTTTTACTTCATTTTCATGGGTAAACTGAGCGACTCCCCATCCCTAAATACATATATTTTAGACATTTATATGGGCAACTTATCTTATGCTATCTAAGTTCTTGATTGAAACTCTTGTTTTTTTTATTTATTTATGCCATATAGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGCGATCGAAGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGGAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCGGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCAGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGTGGTGACAGTCTAGGTGATGGGCGTGGTGCTGCTACTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGCTAGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAGTAAGTAACCTTCCCTTAAGCTATATTCTGTTGCTTCTGGGGTTTTATCCTTGTTGAATGGGAACCATGTGGTCGTCAAGTCTCGTTTAAACAATATATAGAATTTCAAATTATATTTCCATATTTAGAAACTTGACTTTGGATTACGAGGCAATGGTTTGTGATATATGAAGCTCTTATAGAGCTAGTTCTATCCTCTCTGCCAATGAAGTGTCTGCAATTAATGTTCTGGCTTCTTTAAACTGCATCTGGATATTGTATTCCTGAATGATAGTTGGTCCTTTTCAAATAACAAGTATACTTTCATCTATTTTCTAAATGAATGATAATCTCTTGTTTAGAATATGCATGTTTGAGTTCTGTCTGAGAAGTTTGTTAATGATTTAGGAGGTTTTGTAGGTCTAGCTCTATAGTTATTGTAAATGAAGTGGCTTTTGCTTCTCAAGTGCTGGAGAACTTTTTCTCCATTGGGTTTTTCTTATTGAACTGTTTAATTGAAGCCTTTTTTGCATTTTCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAGTAACTACTGTGCTCCTATAGTATTATAATGACAATATTAGCTACTATGGTGTTAATTTTAGTTTGAGTTTCTACTGTATCATTTTTCAATGATAATATTTTTGTATCCTCAGATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTACATATAACCATGGGTACTTGCTTTTCCATTATTTTTTCAAAACAAATAGAGAAATCTGAGAGAGTTCAGGCCTGCATATATCTAGAACTATGTACTTACTAGTTCTTTCTTGGTGTTTGTTCATAAGGCTGATAAATTGACAAATGTAATTACTAGTGAGAGCTAATAGATTTGGTTCTTGTTTCCATAGCTTTTATTCTCCCTTGGTTTTCTCGTTCTTATACATATGCATGGGTGGAAAAAGGTTCTTGTTGCCAGAATTAGGAGGGACAAGTTGCCGTTTTGTCCAATATTTGATACTGTTCGATATCCTCCGAGTTTATCCTATCTAGGAACTATCGACATTATGCATTGTTTTGATTTTTTGCTCTGAGATCCAAACATTTTTAATAATAAGGCTTTGAAATAAGTTTTCCTGTCACTCATTTTTGTAGAAATGTTATGTATTACAGTATTTGTCTTCTTACTGCTTAGGATGACTCATTAGTCTTAGTAGGATACCAGTTTTCTTATTTCTTGAGTGTGGAGGGTGGATACTTTTTTATCTTCTCCTTTTCTGCCAATATTCTTATGTATGGATATTTTAACCATATCATTTATACTATTATATAATTAGCAATACTTTGGTGTTACTTTGGGCTATACTCATCTTTTTGCAGCTCACTTCTACCACAATGGGAAAAAAACGTTTAAAAAATGTGGAGAAAAGAGTTTCACATGTGGCAATTTGCGAATGGATAATTGGGTGGGATGGGTGTAGTTCAGCATGCACCCAAGTTTTTTTTTCTTATATGATTATTATTGTTTAGAAAACTTGTTGTCTTGCACTCCATAAACTGCCCTTTCATGTTGCAGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGA

mRNA sequence

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCCTACGGAGCCCCTGGAGGCGGTGGATACGGAGGCGGTGGTGGAGCAGGCTATGGTGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGGGGCGGCGGCGGCGGTGGTAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCGGAGGCTATGGTGGTCGTGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGCGATCGAAGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGGAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCGGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCAGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGTGGTGACAGTCTAGGTGATGGGCGTGGTGCTGCTACTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGCTAGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTACATATAACCATGGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGA

Coding sequence (CDS)

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCCTACGGAGCCCCTGGAGGCGGTGGATACGGAGGCGGTGGTGGAGCAGGCTATGGTGGGAAGGGCGGTGATGGTGGATATGGAGGCGGAGGCCGTGGGGGCGGCGGCGGCGGTGGTAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCGGAGGCTATGGTGGTCGTGGCGGCGGTGGCGGATATCAAGGAGGAGATCGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGCGCTGGACGTGGTGGCGGGGGTGGTCGTGGCGGAAGCGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTAGAGTGTAACAAGTGTGGTGCACCCTCACCCGGTGGTGCTAGCGATCGAAGTGGTGGTGGTGGTTATAATAGAGGTGGAGGTGACAGTGGCTATGGTGGCAGTCGGAATGGCAGAGGTGGTAGTTTCCACGGTGGTAGAAGTGGAACTCATGATGGAGGTCGAAATGAAGGAGGGAGCAGAGGTGGTAATTCTTATGGTGGTCACCAGGGAGGAGAAGATAGCGGGTACGGTCAAGTTCCCCCATCCTCGGCACCGTCATCTGGTGGTCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTTCAGATTACGGGACTGATGCAGTTCCTCCTCCCGCAAGCTATAGTGGAACAACATACCCTCCAACTTATGGTGGTCCCACTGGTGGCTATGGTGGTGACAGTCTAGGTGATGGGCGTGGTGCTGCTACTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGCTAGTGGTTATGGAAGTACACCAGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGCGACGATTCATGTGATAACTCTAGAATCTATGTATCCAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAATTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAATGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGACCCCTCAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGTTATAGCATCAATGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTACATATAACCATGGGCGCAGAGATAGCTACAGGGACGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCACGTCCTTACTGA

Protein sequence

MSGMYDQGGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGRRDSYRDGGSGPDRHQHGGNRSRPY*

Homology

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BLAST of Chy12G209340 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.2e-94
Identity = 282/491 (57.43%), Postives = 318/491 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGG 60
           M+GMY+Q   GG   PSY   GG GYGGGGG G    GGD GYGG G  GGG     YGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY---GGDGYGGGGGYG----GGDAGYGGRGASGGG----SYGG 60

Query: 61  RGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVC 120
           R   GG GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGDW C
Sbjct: 61  R---GGYGGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGDWRC 120

Query: 121 PNPGCGNLNFARRVECNKCGAPSP----GGASDRSGGGGYNRGGGDSGYGGSRNGRGGSF 180
           PNP CGN+NFARRVECNKCGA +P     GA+DR GGGGY+RGGGDS  GG R GR  S 
Sbjct: 121 PNPSCGNVNFARRVECNKCGALAPSGTSSGANDR-GGGGYSRGGGDSDRGGGRGGRNDS- 180

Query: 181 HGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPSYHG 240
             GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP    
Sbjct: 181 --GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP---- 240

Query: 241 GSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAG 300
             + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG    
Sbjct: 241 -PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG---- 300

Query: 301 GRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDV 360
                         +A   + + Y     A   +VKQCD +CDD+CDN+RIY+SNLPPDV
Sbjct: 301 --------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLPPDV 360

Query: 361 TIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAG 420
           T DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAG
Sbjct: 361 TTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAG 420

Query: 421 GFYNNYDLRGYSINVAMAEKSAPRAPP-------------TYNHGRRDSYRDG-GSGPDR 469
           GF+NNY++RG  I+V MAEKSAPRAP               Y  G  D  RD   SGPDR
Sbjct: 421 GFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNYSSGPDR 422

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BLAST of Chy12G209340 vs. ExPASy TrEMBL
Match: A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 2.2e-223
Identity = 458/497 (92.15%), Postives = 458/497 (92.15%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAP----------GGGGYGGGGGAGYGGKGGDGGYGGGGR--GGG 60
           MSGMYDQGGDAAPSYGAP          GGGGYGGGGGAGYGGKGGDGGYGGGGR  GGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GGGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG 120
           GGGGRGYGGR      GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG
Sbjct: 61  GGGGRGYGGR------GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG 120

Query: 121 SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS----GGGGYNRGGGDSGYGG 180
           SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS    GGGGYNRGGGDSGYGG
Sbjct: 121 SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGG 180

Query: 181 SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS 240
           SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS
Sbjct: 181 SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS 240

Query: 241 YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGY 300
           YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPSAGY
Sbjct: 241 YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGY 300

Query: 301 DGGYNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV 360
           DGGYNAGGRGGYNAGGRGGSYNASGGRA GYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV
Sbjct: 301 DGGYNAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV 360

Query: 361 SNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP 420
           SNLPPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP
Sbjct: 361 SNLPPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP 420

Query: 421 SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDG 469
           SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHG             RRDSYRDG
Sbjct: 421 SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDG 480

[Close]

BLAST of Chy12G209340 vs. ExPASy TrEMBL
Match: A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.9e-222
Identity = 456/494 (92.31%), Postives = 457/494 (92.51%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGG-----------YGGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG            GGGGGAGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120
           GGGRGYGGR    GGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS
Sbjct: 61  GGGRGYGGR----GGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120

Query: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--SGGGGYNRGGGDSGYGGSRN 180
           GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR   GGGGYNRGGGDSGYGGSRN
Sbjct: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSG 469
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480

[Close]

BLAST of Chy12G209340 vs. ExPASy TrEMBL
Match: A0A1S4E2C0 (transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.6e-208
Identity = 432/483 (89.44%), Postives = 434/483 (89.86%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGGRGG 60
           MSGMYDQGGDAAPSYGAPGGGG       GYGG GG GGY      GGGGGG GYGG+GG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGG-------GYGGGGGGGGY------GGGGGGAGYGGKGG 60

Query: 61  GGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP 120
            GG GG    GGRGGGGG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP
Sbjct: 61  DGGYGG----GGRGGGGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP 120

Query: 121 GCGNLNFARRVECNKCGAPSPGGASDR--SGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180
           GCGNLNFARRVECNKCGAPSPGGASDR   GGGGYNRGGGDSGYGGSRNGRGGSFHGGRS
Sbjct: 121 GCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180

Query: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGT 240
           GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGS+DYGT
Sbjct: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGT 240

Query: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360
           GGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE
Sbjct: 301 GGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360

Query: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420
           LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD
Sbjct: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420

Query: 421 LRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSGPDRHQHGGNRS 469
           LRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSGPDRHQHGGNRS
Sbjct: 421 LRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 460

[Close]

BLAST of Chy12G209340 vs. ExPASy TrEMBL
Match: A0A1S4E1L8 (transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.3e-207
Identity = 429/483 (88.82%), Postives = 431/483 (89.23%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGGRGG 60
           MSGMYDQGGDAAPSYGAPGGGG       GYGG GG GGY      GGGGGG GYGG+GG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGG-------GYGGGGGGGGY------GGGGGGAGYGGKGG 60

Query: 61  GGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP 120
            GG GG    GGRGG         GGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP
Sbjct: 61  DGGYGG----GGRGG---------GGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNP 120

Query: 121 GCGNLNFARRVECNKCGAPSPGGASDR--SGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180
           GCGNLNFARRVECNKCGAPSPGGASDR   GGGGYNRGGGDSGYGGSRNGRGGSFHGGRS
Sbjct: 121 GCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRS 180

Query: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGT 240
           GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGS+DYGT
Sbjct: 181 GTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGT 240

Query: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360
           GGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE
Sbjct: 301 GGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360

Query: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420
           LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD
Sbjct: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420

Query: 421 LRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSGPDRHQHGGNRS 469
           LRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSGPDRHQHGGNRS
Sbjct: 421 LRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 457

[Close]

BLAST of Chy12G209340 vs. ExPASy TrEMBL
Match: A0A5A7UXQ0 (Transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00600 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 1.0e-204
Identity = 426/456 (93.42%), Postives = 428/456 (93.86%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGG-----------YGGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG            GGGGGAGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120
           GGGRGYGGR    GGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS
Sbjct: 61  GGGRGYGGR----GGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120

Query: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR--SGGGGYNRGGGDSGYGGSRN 180
           GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR   GGGGYNRGGGDSGYGGSRN
Sbjct: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG 444
           HSAG    +YDLRGYSINVAMAEKSAPRAPPTYNHG
Sbjct: 421 HSAG----DYDLRGYSINVAMAEKSAPRAPPTYNHG 448

[Close]

BLAST of Chy12G209340 vs. NCBI nr
Match: XP_011658817.1 (transcription initiation factor TFIID subunit 15b [Cucumis sativus])

HSP 1 Score: 788 bits (2036), Expect = 7.35e-285
Identity = 458/497 (92.15%), Postives = 458/497 (92.15%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGG----------YGGGGGAGYGGKGGDGGYGGGGRGGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG          YGGGGGAGYGGKGGDGGYGGGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GG--RGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG 120
           GG  RGYGGR      GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG
Sbjct: 61  GGGGRGYGGR------GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGG 120

Query: 121 SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGG----YNRGGGDSGYGG 180
           SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGG    YNRGGGDSGYGG
Sbjct: 121 SGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGG 180

Query: 181 SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS 240
           SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS
Sbjct: 181 SRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGS 240

Query: 241 YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGY 300
           YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPSAGY
Sbjct: 241 YPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGY 300

Query: 301 DGGYNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV 360
           DGGYNAGGRGGYNAGGRGGSYNASGGRA GYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV
Sbjct: 301 DGGYNAGGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYV 360

Query: 361 SNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP 420
           SNLPPDVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP
Sbjct: 361 SNLPPDVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDP 420

Query: 421 SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDG 468
           SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPP YNHG             RRDSYRDG
Sbjct: 421 SAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDG 480

[Close]

BLAST of Chy12G209340 vs. NCBI nr
Match: XP_008457317.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis melo])

HSP 1 Score: 785 bits (2028), Expect = 1.17e-283
Identity = 456/494 (92.31%), Postives = 457/494 (92.51%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGY-----------GGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG            GGGGGAGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120
           GGGRGYGGRG    GGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS
Sbjct: 61  GGGRGYGGRG----GGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120

Query: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGG--YNRGGGDSGYGGSRN 180
           GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR GGGG  YNRGGGDSGYGGSRN
Sbjct: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSG 468
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 480

[Close]

BLAST of Chy12G209340 vs. NCBI nr
Match: XP_016902120.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis melo])

HSP 1 Score: 747 bits (1928), Expect = 6.43e-269
Identity = 426/494 (86.23%), Postives = 427/494 (86.44%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGY-----------GGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG            GGGGGAGYGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120
           G                                  GGGYQGGDRGGRGAGRGGGGGRGGS
Sbjct: 61  G----------------------------------GGGYQGGDRGGRGAGRGGGGGRGGS 120

Query: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGG--YNRGGGDSGYGGSRN 180
           GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR GGGG  YNRGGGDSGYGGSRN
Sbjct: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSG 468
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 460

[Close]

BLAST of Chy12G209340 vs. NCBI nr
Match: XP_016902121.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo])

HSP 1 Score: 746 bits (1925), Expect = 1.65e-268
Identity = 423/494 (85.63%), Postives = 424/494 (85.83%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGY-----------GGGGGAGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGG            GGGGGAGYGGKGGDGGYGGGGRGG  
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGG-- 60

Query: 61  GGGRGYGGRGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGS 120
                                              GGGYQGGDRGGRGAGRGGGGGRGGS
Sbjct: 61  -----------------------------------GGGYQGGDRGGRGAGRGGGGGRGGS 120

Query: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGG--YNRGGGDSGYGGSRN 180
           GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR GGGG  YNRGGGDSGYGGSRN
Sbjct: 121 GRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRN 180

Query: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240
           GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP
Sbjct: 181 GRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPP 240

Query: 241 SYHGGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGG 300
           SYHGGS+DYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPS GYDGG
Sbjct: 241 SYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGG 300

Query: 301 YNAGGRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360
           YNAGGRGGYNAGGRGGSYNASGGR  GYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNL
Sbjct: 301 YNAGGRGGYNAGGRGGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNL 360

Query: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420
           PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA
Sbjct: 361 PPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAA 420

Query: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSG 468
           HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHG             RRDSYRDGGSG
Sbjct: 421 HSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSG 457

[Close]

BLAST of Chy12G209340 vs. NCBI nr
Match: KGN66282.2 (hypothetical protein Csa_023345 [Cucumis sativus])

HSP 1 Score: 738 bits (1906), Expect = 4.70e-266
Identity = 400/421 (95.01%), Postives = 400/421 (95.01%), Query Frame = 0


Query: 65  GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 124
           GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 10  GGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 69

Query: 125 LNFARRVECNKCGAPSPGGASDRSGGGG----YNRGGGDSGYGGSRNGRGGSFHGGRSGT 184
           LNFARRVECNKCGAPSPGGASDRSGGGG    YNRGGGDSGYGGSRNGRGGSFHGGRSGT
Sbjct: 70  LNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGT 129

Query: 185 HDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDA 244
           HDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDA
Sbjct: 130 HDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDA 189

Query: 245 VPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAGGRGGYNAGG 304
           VPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAA RGGPSAGYDGGYNAGGRGGYNAGG
Sbjct: 190 VPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGGYNAGG 249

Query: 305 RGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELF 364
           RGGSYNASGGRA GYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVT DELRELF
Sbjct: 250 RGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDELRELF 309

Query: 365 GGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLR 424
           GGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLR
Sbjct: 310 GGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLR 369

Query: 425 GYSINVAMAEKSAPRAPPTYNHG-------------RRDSYRDGGSGPDRHQHGGNRSRP 468
           GYSINVAMAEKSAPRAPP YNHG             RRDSYRDGGSGPDRHQHGGNRSRP
Sbjct: 370 GYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRP 429

[Close]

BLAST of Chy12G209340 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-95
Identity = 282/491 (57.43%), Postives = 318/491 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGG 60
           M+GMY+Q   GG   PSY   GG GYGGGGG G    GGD GYGG G  GGG     YGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY---GGDGYGGGGGYG----GGDAGYGGRGASGGG----SYGG 60

Query: 61  RGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVC 120
           R   GG GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGDW C
Sbjct: 61  R---GGYGGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGDWRC 120

Query: 121 PNPGCGNLNFARRVECNKCGAPSP----GGASDRSGGGGYNRGGGDSGYGGSRNGRGGSF 180
           PNP CGN+NFARRVECNKCGA +P     GA+DR GGGGY+RGGGDS  GG R GR  S 
Sbjct: 121 PNPSCGNVNFARRVECNKCGALAPSGTSSGANDR-GGGGYSRGGGDSDRGGGRGGRNDS- 180

Query: 181 HGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPSYHG 240
             GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP    
Sbjct: 181 --GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP---- 240

Query: 241 GSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAG 300
             + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG    
Sbjct: 241 -PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG---- 300

Query: 301 GRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDV 360
                         +A   + + Y     A   +VKQCD +CDD+CDN+RIY+SNLPPDV
Sbjct: 301 --------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLPPDV 360

Query: 361 TIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAG 420
           T DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAG
Sbjct: 361 TTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAG 420

Query: 421 GFYNNYDLRGYSINVAMAEKSAPRAPP-------------TYNHGRRDSYRDG-GSGPDR 469
           GF+NNY++RG  I+V MAEKSAPRAP               Y  G  D  RD   SGPDR
Sbjct: 421 GFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNYSSGPDR 422

[Close]

BLAST of Chy12G209340 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-95
Identity = 282/491 (57.43%), Postives = 318/491 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGGGGRGYGG 60
           M+GMY+Q   GG   PSY   GG GYGGGGG G    GGD GYGG G  GGG     YGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY---GGDGYGGGGGYG----GGDAGYGGRGASGGG----SYGG 60

Query: 61  RGGGGGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVC 120
           R   GG GGGGG G RGGG        GGGYQGGDRGGRG+        GG GRDGDW C
Sbjct: 61  R---GGYGGGGGRGNRGGG--------GGGYQGGDRGGRGS--------GGGGRDGDWRC 120

Query: 121 PNPGCGNLNFARRVECNKCGAPSP----GGASDRSGGGGYNRGGGDSGYGGSRNGRGGSF 180
           PNP CGN+NFARRVECNKCGA +P     GA+DR GGGGY+RGGGDS  GG R GR  S 
Sbjct: 121 PNPSCGNVNFARRVECNKCGALAPSGTSSGANDR-GGGGYSRGGGDSDRGGGRGGRNDS- 180

Query: 181 HGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSA--PSSGGLAGSYPPSYHG 240
             GRS  ++  R +GGSR G SYG     E+  YGQ PP +A  PS  G +GSYPP    
Sbjct: 181 --GRS--YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDG-SGSYPP---- 240

Query: 241 GSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAATRGGPSAGYDGGYNAG 300
             + YG +AVPPP SYSG   PP+YGGP GGYG D+   G     RGG S GYDGG    
Sbjct: 241 -PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDAPSTG----GRGGRSGGYDGG---- 300

Query: 301 GRGGYNAGGRGGSYNASGGRASGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDV 360
                         +A   + + Y     A   +VKQCD +CDD+CDN+RIY+SNLPPDV
Sbjct: 301 --------------SAPRRQEASYED---AATEKVKQCDADCDDNCDNARIYISNLPPDV 360

Query: 361 TIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAG 420
           T DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAG
Sbjct: 361 TTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAG 420

Query: 421 GFYNNYDLRGYSINVAMAEKSAPRAPP-------------TYNHGRRDSYRDG-GSGPDR 469
           GF+NNY++RG  I+V MAEKSAPRAP               Y  G  D  RD   SGPDR
Sbjct: 421 GFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNYSSGPDR 422

The following BLAST results are available for this feature:

BLAST of Chy12G209340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KD0	3.2e-94	57.43	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Chy12G209340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC4	2.2e-223	92.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1	[more]
A0A1S3C4S9	1.9e-222	92.31	transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=...	[more]
A0A1S4E2C0	2.6e-208	89.44	transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=...	[more]
A0A1S4E1L8	1.3e-207	88.82	transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=...	[more]
A0A5A7UXQ0	1.0e-204	93.42	Transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo var...	[more]

BLAST of Chy12G209340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658817.1	7.35e-285	92.15	transcription initiation factor TFIID subunit 15b [Cucumis sativus]	[more]
XP_008457317.1	1.17e-283	92.31	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis...	[more]
XP_016902120.1	6.43e-269	86.23	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis...	[more]
XP_016902121.1	1.65e-268	85.63	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis...	[more]
KGN66282.2	4.70e-266	95.01	hypothetical protein Csa_023345 [Cucumis sativus]	[more]

BLAST of Chy12G209340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58470.1	2.3e-95	57.43	TBP-associated factor 15B	[more]
AT5G58470.2	2.3e-95	57.43	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 341..427 e-value: 4.9E-9 score: 46.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 342..371 e-value: 3.3E-6 score: 26.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 340..431 score: 14.010044
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 113..139 e-value: 1.8E-7 score: 40.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 111..142 e-value: 3.5E-8 score: 32.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 115..136
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 111..142 score: 10.150199
None	No IPR available	GENE3D	4.10.1060.10		coord: 109..143 e-value: 2.9E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..468
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..468
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 4..468
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 4..468
None	No IPR available	CDD	cd12280	RRM_FET	coord: 342..428 e-value: 1.78873E-36 score: 127.429
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 320..467 e-value: 6.7E-18 score: 67.0
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 338..460
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 104..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G209340.1	Chy12G209340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding