Chy12G208490 (gene) Cucumber (hystrix) v1

Overview


Name	Chy12G208490
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-CH-type domain-containing protein
Location	chrH12: 2769552 .. 2771478 (-)
RNA-Seq Expression	Chy12G208490
Synteny	Chy12G208490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACGTAAGTATTCATTCTAATTAACTTCCATTTTTTCCTATCAGATTTCTTTCATTCCCTCAGAAACCCAATTCTTAATAGAATCCTTTGATTATCATTGGTTTTGTTGAAGTTTTACCTGGACTTGGATTAGCTTGGGTCTTGCTAGTAGTTTAATTGGAGATAAATTGAAAATCTAAGCTCCTGAAAGATAGAAGAGTTTTTTGCTTGGGAAAGATTTCTAAACTTTCTCTGCTTCTTCTTTTAGCAGCAATTCTCTTGCGTTTTCTGCCATGAATTACCCTCAAACAGTTTCATCACTTTGTTGTATTGTGTAAATTCACTATGACTACAAACTTAAAGTGGTTAGATGGATCTTCTGCTGTCAGCATTTGGTTTTCTTTATTGTACTAGAAGTAATCAACTCAATTTTGGTGGCTTCCATCTGTTGTAACTTCTAAGTTGTTCAAAGTTAACATTTATCTATATAGTATCATGTAGATAAGATAAAAGAATGATATATGACATATCTGAAGTTTGGATATCTCCTTTTTTTCCTTTGCATTTCAGAATATGATGGTGTCACACTTAAGTTCCTATAAATTTCCATGTGTCCAAGTTGAACTTACAAACTTGTCCATAGCTAATCTGTTCCATTTTTCTTTCATTCTTTTATTTGTGATAATGTAAATCATTCAGACATTTAAATCAACTTGGGCTGACAAATTAGAATTCGGGTTAGAAACCTTACATCAACTTGATTTTGTGTGTAAGGCTTCACTATTGAGAATGAATATATTGTCATTGAAGGGTGTTTGGTGCAATGGGAATTGAGTTATAAAGCATGAAGTATAGAGTTGTAAGATGAAATTTCTGAATAAATGTGCAAACTTTATCGGTATTTGCTATTAAAATTGATTTGCTGAACAACTTATGAATTAGTGAGCTAGACACCCCAAAAGTTCATGTCTTGTCATATTAGAAGGTATTCAACGGATATAAATGAGGTATATGATCGTTTGTATGAGAACGACTATTCTCGAATGTAGGAACACCATTAGACATCTTGAAGGTGCGGAGTTCATTCCAATTCTCTAGATAAGAACTCTCAATCAGCCAGATTTAGATTTCTTTTGGCTAGTTGGTGTATACGACTCTCCCATTTCAAAAAATTCGAACCTCTTGAATTATGTTTAAGTTGAAGATTTGGCAATACCTTTTTATGACTATTAGCTTGACAAGTGATACAACCTTTTCCTTGCAGAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTGGCAAGTCAACAAATTAACGAACCGAGCAATGCAATTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG

mRNA sequence

ATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTGGCAAGTCAACAAATTAACGAACCGAGCAATGCAATTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG

Coding sequence (CDS)

ATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGGAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTGGCAAGTCAACAAATTAACGAACCGAGCAATGCAATTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG

Protein sequence

MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS*

Homology

[Close]

BLAST of Chy12G208490 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+ATA
Sbjct: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Chy12G208490 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.3e-123
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Chy12G208490 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.3e-123
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Chy12G208490 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.3e-123
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Chy12G208490 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 207/233 (88.84%), Postives = 214/233 (91.85%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAG---SCSDMSVLDDSDDQSWHSVFDSTAWGSH 60
           MSAV APRGD   A+PSSLP+RDARSAAG   S SD+SVLDDSDDQSWHSVFDSTAWGSH
Sbjct: 112 MSAVLAPRGDPILADPSSLPYRDARSAAGSSSSSSDLSVLDDSDDQSWHSVFDSTAWGSH 171

Query: 61  GEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGG 120
           G+G FSGEIEGVPDAE G FIS SSSEVDLESGDLEVKVHLGKIERDCRICHLELES GG
Sbjct: 172 GDGLFSGEIEGVPDAETGGFISGSSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGG 231

Query: 121 RDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSN-- 180
           RD++DTPI LGCCCRGDLGTAHK CAETWFKIKGNTICEICGATAQNVASQQINEPSN  
Sbjct: 232 RDHNDTPILLGCCCRGDLGTAHKHCAETWFKIKGNTICEICGATAQNVASQQINEPSNAA 291

Query: 181 AIATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           A A AVASSA+TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 292 AAAAAVASSAMTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 344

[Close]

BLAST of Chy12G208490 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus])

HSP 1 Score: 451 bits (1161), Expect = 6.07e-160
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+ATA
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 180

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Chy12G208490 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus])

HSP 1 Score: 451 bits (1161), Expect = 3.58e-159
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+ATA
Sbjct: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Chy12G208490 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo])

HSP 1 Score: 446 bits (1146), Expect = 1.18e-157
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Chy12G208490 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa])

HSP 1 Score: 446 bits (1146), Expect = 6.67e-157
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 49  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 108

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 109 QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 168

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 169 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 228

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 229 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Chy12G208490 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida])

HSP 1 Score: 435 bits (1118), Expect = 2.18e-153
Identity = 219/228 (96.05%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60
           MSAVEAPRGD DPANPSS+ FRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDPDPANPSSVLFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120
           QFSGEIEGVPDAEMGHFISE SSEVDLESGDLEVKVHLGKIERDCRICHLELES GGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISECSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDN 120

Query: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAIATA 180
            DTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNA+A A
Sbjct: 121 FDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228
           V SSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VPSSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Chy12G208490 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-35
Identity = 85/172 (49.42%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 60  GQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRD 119
           G    E E V D E     S  S E+DLE G  E  VHL + ERDCRICH+ L+++    
Sbjct: 34  GAVEKEEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAA--NL 93

Query: 120 NSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVAS--QQINEPSNAI 179
            S  PI+LGC C+ DL  AHK CAETWFKIKGN ICE+CG+ A NV    +  +E S   
Sbjct: 94  ESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNE 153

Query: 180 ATAVASSAL-TAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
           A  V +  L T+   LVE R+ + G R +NFLLACM+ AF +SWLFHF + S
Sbjct: 154 ANGVENLTLRTSGPRLVEGRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Chy12G208490 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-33
Identity = 85/198 (42.93%), Postives = 108/198 (54.55%), Query Frame = 0


Query: 80  ESSSEVDLESGDL---EVKVHLG------------------KIERDCRICHLELESSGGR 139
           +S S+VDLESG +   E ++H G                  K  RDCRICHL LE++   
Sbjct: 35  DSLSQVDLESGGVPAPEKQLHSGGKKRRTRRRKRRKKKKKKKGGRDCRICHLPLETNKEA 94

Query: 140 DNSD-----------------------------TPIQLGCCCRGDLGTAHKQCAETWFKI 199
           ++ D                              P+QLGC C+GDLG AH +CAETWFKI
Sbjct: 95  EDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKGDLGVAHSKCAETWFKI 154

Query: 200 KGNTICEICGATAQNVASQQINEPSNAIATAVASSALTAPLTLVETRTIFHGRRIMNFLL 228
           KGN  CEICGA A NVA +Q N  S A   + A++  +  LT  E R I+HGR +MNFLL
Sbjct: 155 KGNMTCEICGAMALNVAGEQSNPESTASTHSQAAAGQS--LTQTEPRGIWHGRPVMNFLL 214

[Close]

BLAST of Chy12G208490 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 7.6e-28
Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 25  RSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMGHFISESSSE 84
           RS  GS   +   D  D  S +S F ST  GS+       E EG    ++   +S SSSE
Sbjct: 18  RSLDGSDVSVYYSDGEDVMSCYSYFYSTTGGSY-------EYEGDQSRKVSSVMSPSSSE 77

Query: 85  VDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAE 144
           +D +             E+DCRICHL +E+SGG       I+LGC C+ DL  AH+QCAE
Sbjct: 78  IDDDDA-------TAPPEKDCRICHLGVETSGG-----GAIELGCSCKDDLAVAHRQCAE 137

Query: 145 TWFKIKGNTICEICGATAQNV--------ASQQINEPSNAIATAVASSALTAPLTLVETR 204
           TWFKIKG+  CEIC + A+NV        ++ +  E  N   TA          T+VE R
Sbjct: 138 TWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELRNGEETAAGEG---GGATVVENR 197

Query: 205 TIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 229
             +  +R++N +LACM+  F +SW+FHF + S
Sbjct: 198 --WQPQRVVNLVLACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of Chy12G208490 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-26
Identity = 81/205 (39.51%), Postives = 99/205 (48.29%), Query Frame = 0


Query: 32  SDMSVLDDSD---DQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMGHFISESSSEVDLE 91
           SD+S  D S    D  +HS   S          F GE E   D      + + +    + 
Sbjct: 23  SDVSGEDSSSCDYDYDFHSAVRS----------FCGEFEIADD------LDDETDTESVA 82

Query: 92  SGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFK 151
           SG +      G  E+DCRICHL LESS  R     P+ LGC C+ DLG  HKQCA+TWFK
Sbjct: 83  SGSIR-----GSPEKDCRICHLGLESS--RHECGDPMVLGCSCKDDLGYVHKQCADTWFK 142

Query: 152 IKGNTICEICGATAQNVASQQINEPSNAIATAVASSALTAPLTLVET-----RTIFHGRR 211
           IKGN  CEIC + AQN            + T V         T+V T     R +  G R
Sbjct: 143 IKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNR 202

Query: 212 IMNFLLACMLLAFAMSWLFHFKLMS 229
            +NFLL CM+ AF +SW FHF L S
Sbjct: 203 FLNFLLTCMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Chy12G208490 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-16
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 102 ERDCRICHLELESS---GGRDNSDTP--IQLGCCCRGDLGTAHKQCAETWFKIKGNTICE 161
           ER CRICH   + S    G D S +P  I++GC C+ +LG AH  CAE WFK++GN++CE
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVCE 158

Query: 162 ICGATAQNV 166
           ICG TA+NV
Sbjct: 159 ICGCTAKNV 167

The following BLAST results are available for this feature:

BLAST of Chy12G208490 vs.


Match Name	E-value	Identity	Description

BLAST of Chy12G208490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0P0	1.5e-124	99.56	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52792...	[more]
A0A5D3BFF6	8.3e-123	98.68	E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C517	8.3e-123	98.68	uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C6R6	8.3e-123	98.68	uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HM49	2.2e-107	88.84	uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]

BLAST of Chy12G208490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658411.1	6.07e-160	99.56	uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]	[more]
XP_004145266.2	3.58e-159	99.56	uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hy...	[more]
XP_008457415.1	1.18e-157	98.68	PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]	[more]
XP_008457414.1	6.67e-157	98.68	PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_038895035.1	2.18e-153	96.05	uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 unchara...	[more]

BLAST of Chy12G208490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	2.2e-35	49.42	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	4.6e-33	42.93	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	7.6e-28	38.68	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.9e-26	39.51	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	5.1e-16	53.62	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 104..159 e-value: 2.6E-15 score: 66.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 105..158 e-value: 1.0E-9 score: 38.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 97..165 score: 19.093723
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 95..170 e-value: 3.9E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 34..226
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 34..226
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 105..159 e-value: 9.05565E-13 score: 59.2632
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 102..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy12G208490.1	Chy12G208490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding