Chy11G193490 (gene) Cucumber (hystrix) v1

Overview
NameChy11G193490
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein EXORDIUM-like 5
LocationchrH11: 10679611 .. 10680657 (-)
RNA-Seq ExpressionChy11G193490
SyntenyChy11G193490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTCTCTTCCTCCTCCTCCTCTCCATCTCTGCATCTTCTCTTTCCTCATTAATGGCTGCCTCTCCTTCCTTCCAAACCCTCGACACCAACACCCATTTCTTCAACCCCAAACTTCCCCCAAATTCCCTCTCCTCTTCCAAGAAATTTGAGGGCTCCTCAGATTTCGTCAACCTCCGCTACCACATGGGCCCTGTTCTTTCCTCTTCTCCCATCAACATTTACTTAATCTGGTACGGGAAATGGTCCGTCTCCCAGAAATTGCTAATTAAGGATTTTCTCCTCTCAATTTCACCCTCCCATCCCCGCCGCGCCCCTCCTTCCCCTTCTGTCTCTCAGTGGTGGCAGACTGTATCCCTTTACACTGATCAAACCGGCGCTAATGTCTCCCGCTCCGTCGTCATCGCCGGCGAACACTCGGACATCCACCACTCCCACGGTACCGATCTCACTCGCCTCTCCATCCAGAACGTTATCGCCACCGCCGTCCGATCCGCGCCATTCCCCGTCGACCACCGGAACGGGATGTTTCTGGTACTTACTTCTCAGGATGTTACCATGCAGGACTTTTGTCGAGCAGTTTGTGGGTTTCATTACTTCACCTTCCCTTCCATGGTCGGTTACACGCTTCCCTACGCTTGGGTTGGCCATTCCGGGAAGCAATGCCCGGAGCAATGCGCCTATCCCTTCGCCGTGCCGGCGTATATGGCCGGAGGTGGCCCCAGCGCTCTCTCACCACCGAATAGAGACGTGGCGTTGGATGGAATGATCAGTGTAATCGGTCATGAGTTAGCTGAAGTGGCTTCAAATCCATTGGTGAATGCTTGGTACGCGGGTGAGGATCCGACGGCGCCGACGGAGATCGGTGACCTCTGTGAGGGGCTGTATGGGACCGGCGGTGGTGGTGGGTATATAGGGCAGGTAATGAGGGATGGAGAAGGAAGGACGTTTAATGTAAATGGGAGAAATGGAAGGAAGTTCTTGTTGCAGTGGCTGTGGAGTCCGGTCCTGAAGGCCTGTGCCGGTCCCAATGCTCTGGATTGA

mRNA sequence

ATGGCGTTTCTCTTCCTCCTCCTCCTCTCCATCTCTGCATCTTCTCTTTCCTCATTAATGGCTGCCTCTCCTTCCTTCCAAACCCTCGACACCAACACCCATTTCTTCAACCCCAAACTTCCCCCAAATTCCCTCTCCTCTTCCAAGAAATTTGAGGGCTCCTCAGATTTCGTCAACCTCCGCTACCACATGGGCCCTGTTCTTTCCTCTTCTCCCATCAACATTTACTTAATCTGGTACGGGAAATGGTCCGTCTCCCAGAAATTGCTAATTAAGGATTTTCTCCTCTCAATTTCACCCTCCCATCCCCGCCGCGCCCCTCCTTCCCCTTCTGTCTCTCAGTGGTGGCAGACTGTATCCCTTTACACTGATCAAACCGGCGCTAATGTCTCCCGCTCCGTCGTCATCGCCGGCGAACACTCGGACATCCACCACTCCCACGGTACCGATCTCACTCGCCTCTCCATCCAGAACGTTATCGCCACCGCCGTCCGATCCGCGCCATTCCCCGTCGACCACCGGAACGGGATGTTTCTGGTACTTACTTCTCAGGATGTTACCATGCAGGACTTTTGTCGAGCAGTTTGTGGGTTTCATTACTTCACCTTCCCTTCCATGGTCGGTTACACGCTTCCCTACGCTTGGGTTGGCCATTCCGGGAAGCAATGCCCGGAGCAATGCGCCTATCCCTTCGCCGTGCCGGCGTATATGGCCGGAGGTGGCCCCAGCGCTCTCTCACCACCGAATAGAGACGTGGCGTTGGATGGAATGATCAGTGTAATCGGTCATGAGTTAGCTGAAGTGGCTTCAAATCCATTGGTGAATGCTTGGTACGCGGGTGAGGATCCGACGGCGCCGACGGAGATCGGTGACCTCTGTGAGGGGCTGTATGGGACCGGCGGTGGTGGTGGGTATATAGGGCAGGTAATGAGGGATGGAGAAGGAAGGACGTTTAATGTAAATGGGAGAAATGGAAGGAAGTTCTTGTTGCAGTGGCTGTGGAGTCCGGTCCTGAAGGCCTGTGCCGGTCCCAATGCTCTGGATTGA

Coding sequence (CDS)

ATGGCGTTTCTCTTCCTCCTCCTCCTCTCCATCTCTGCATCTTCTCTTTCCTCATTAATGGCTGCCTCTCCTTCCTTCCAAACCCTCGACACCAACACCCATTTCTTCAACCCCAAACTTCCCCCAAATTCCCTCTCCTCTTCCAAGAAATTTGAGGGCTCCTCAGATTTCGTCAACCTCCGCTACCACATGGGCCCTGTTCTTTCCTCTTCTCCCATCAACATTTACTTAATCTGGTACGGGAAATGGTCCGTCTCCCAGAAATTGCTAATTAAGGATTTTCTCCTCTCAATTTCACCCTCCCATCCCCGCCGCGCCCCTCCTTCCCCTTCTGTCTCTCAGTGGTGGCAGACTGTATCCCTTTACACTGATCAAACCGGCGCTAATGTCTCCCGCTCCGTCGTCATCGCCGGCGAACACTCGGACATCCACCACTCCCACGGTACCGATCTCACTCGCCTCTCCATCCAGAACGTTATCGCCACCGCCGTCCGATCCGCGCCATTCCCCGTCGACCACCGGAACGGGATGTTTCTGGTACTTACTTCTCAGGATGTTACCATGCAGGACTTTTGTCGAGCAGTTTGTGGGTTTCATTACTTCACCTTCCCTTCCATGGTCGGTTACACGCTTCCCTACGCTTGGGTTGGCCATTCCGGGAAGCAATGCCCGGAGCAATGCGCCTATCCCTTCGCCGTGCCGGCGTATATGGCCGGAGGTGGCCCCAGCGCTCTCTCACCACCGAATAGAGACGTGGCGTTGGATGGAATGATCAGTGTAATCGGTCATGAGTTAGCTGAAGTGGCTTCAAATCCATTGGTGAATGCTTGGTACGCGGGTGAGGATCCGACGGCGCCGACGGAGATCGGTGACCTCTGTGAGGGGCTGTATGGGACCGGCGGTGGTGGTGGGTATATAGGGCAGGTAATGAGGGATGGAGAAGGAAGGACGTTTAATGTAAATGGGAGAAATGGAAGGAAGTTCTTGTTGCAGTGGCTGTGGAGTCCGGTCCTGAAGGCCTGTGCCGGTCCCAATGCTCTGGATTGA

Protein sequence

MAFLFLLLLSISASSLSSLMAASPSFQTLDTNTHFFNPKLPPNSLSSSKKFEGSSDFVNLRYHMGPVLSSSPINIYLIWYGKWSVSQKLLIKDFLLSISPSHPRRAPPSPSVSQWWQTVSLYTDQTGANVSRSVVIAGEHSDIHHSHGTDLTRLSIQNVIATAVRSAPFPVDHRNGMFLVLTSQDVTMQDFCRAVCGFHYFTFPSMVGYTLPYAWVGHSGKQCPEQCAYPFAVPAYMAGGGPSALSPPNRDVALDGMISVIGHELAEVASNPLVNAWYAGEDPTAPTEIGDLCEGLYGTGGGGGYIGQVMRDGEGRTFNVNGRNGRKFLLQWLWSPVLKACAGPNALD*
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SII52.3e-14570.54Protein EXORDIUM-like 5 OS=Arabidopsis thaliana OX=3702 GN=EXL5 PE=2 SV=1[more]
Q9FHM91.4e-10560.86Protein EXORDIUM-like 3 OS=Arabidopsis thaliana OX=3702 GN=EXL3 PE=2 SV=1[more]
O821763.7e-10355.49Protein EXORDIUM-like 7 OS=Arabidopsis thaliana OX=3702 GN=EXL7 PE=2 SV=2[more]
Q9C6E44.6e-4537.54Protein EXORDIUM-like 1 OS=Arabidopsis thaliana OX=3702 GN=EXL1 PE=2 SV=1[more]
Q9ZPE71.6e-4237.76Protein EXORDIUM OS=Arabidopsis thaliana OX=3702 GN=EXO PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAW58.3e-19998.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118330 PE=3 SV=1[more]
A0A6J1JFI12.0e-18993.60protein EXORDIUM-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111484053 PE=3 SV=1[more]
A0A6J1FYV78.6e-18892.75protein EXORDIUM-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111449095 PE=3 SV=1[more]
A0A5A7TWF31.4e-18597.52Protein EXORDIUM-like 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1I0U19.8e-18490.83protein EXORDIUM-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111469815 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_004139972.19.63e-25498.00protein EXORDIUM-like 5 [Cucumis sativus] >KGN46653.1 hypothetical protein Csa_0... [more]
XP_038876642.13.57e-24896.25protein EXORDIUM-like 5 [Benincasa hispida][more]
XP_022986234.12.06e-24193.60protein EXORDIUM-like 5 [Cucurbita maxima][more]
KAG7010812.11.83e-24092.24Protein EXORDIUM-like 5, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6570974.11.62e-23992.75Protein EXORDIUM-like 5, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT2G17230.11.6e-14670.54EXORDIUM like 5 [more]
AT5G51550.19.6e-10760.86EXORDIUM like 3 [more]
AT2G35150.12.6e-10455.49EXORDIUM like 1 [more]
AT1G35140.13.3e-4637.54Phosphate-responsive 1 family protein [more]
AT4G08950.11.2e-4337.76Phosphate-responsive 1 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006766Protein EXORDIUM-likePFAMPF04674Phi_1coord: 60..343
e-value: 9.2E-100
score: 333.5
IPR006766Protein EXORDIUM-likePANTHERPTHR31279PROTEIN EXORDIUM-LIKE 5coord: 22..347
NoneNo IPR availablePANTHERPTHR31279:SF52PHOSPHATE-INDUCED PROTEIN 1-RELATEDcoord: 22..347

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G193490.1Chy11G193490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0016021 integral component of membrane