Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTTAGGGCTGGATTGGTATTGATTTCATTCTAATTTTCTGCTCATAATTTACTTGATACTTTTTCTTAAGCTCATGAAATGTAGAGATTTTTATTTATACGCTTTGATTTTTTTTTTTTTTTTTTTTTTTTGTTGAATGGGAGATTTTCTTTCTCTACTGATATAATGAAATGTAAATTTAATTTAATTTGTAGGGAACTTATGTTTAGGGCATCAAAGAAGAAGTTGTTTTGTCCCTTGCTCATGCTCTTTCCTTGATAGCATCTGAAGAAGGTTAGAGTAGTATAAAGCTACTTTTAGCATTTGATCTATTGAAATGTACTAATTTTCTAGGTTGGTTATTTGCTGGGTTTACGATTCCTTTAATTGTGTCATTTTGATGGTTTATTATTTTTGTTTTTGTTTCCACATTGTACCTATTCAATACTTAATCATTTTGTTTATCAAACTCCATGCTCCAGTAACATAGAATCAAACCATTAGCATAAATTCAAAGAAAGGAAAGCAGAAACTTAATAGAATTATTAATACAGTCGTACTTAATTGTGTTCCTTAACCCACTTTCAACATATTTATTTCATAGACCATGAGTAATCCTATCATAATTGTGGTGTGGTGAATATTATCTATATTAGGTTTAAGCTTTGCTTATACAAAAATGCCCCTCCATCTCCTAATCTCGATCCATTGGCCTATGTTGACAAATCTAGAGTTGCCATCATAAATCGTTAAATTTATCTAAATCCATCAACAAGGATATAACTTGGATATTTGAAGTCTTAGGTGCTTTCTAAATTCTATCCTCTATTTAATTATTCTATAGGTGTTATTGGATAACATGGATAGAAGTTGGATGCAAATTGGAACTCGAGTATTGGAAGAATACAAAAATGGAGTTAGAAGTTTTTTAGATTTTGAGTTTATGCATACAACATCAAATCATATATCTTGTCCATGCAAGAGATGTAATAATGCAGTACTTAAAACTCAAGATGATGTTAAAGCAGATTTGTTG
mRNA sequence
ATGTTGTTTAGGGCTGGATTGGTGTTATTGGATAACATGGATAGAAGTTGGATGCAAATTGGAACTCGAGTATTGGAAGAATACAAAAATGGAGTTAGAAGTTTTTTAGATTTTGAGTTTATGCATACAACATCAAATCATATATCTTGTCCATGCAAGAGATGTAATAATGCAGTACTTAAAACTCAAGATGATGTTAAAGCAGATTTGTTG
Coding sequence (CDS)
ATGTTGTTTAGGGCTGGATTGGTGTTATTGGATAACATGGATAGAAGTTGGATGCAAATTGGAACTCGAGTATTGGAAGAATACAAAAATGGAGTTAGAAGTTTTTTAGATTTTGAGTTTATGCATACAACATCAAATCATATATCTTGTCCATGCAAGAGATGTAATAATGCAGTACTTAAAACTCAAGATGATGTTAAAGCAGATTTGTTG
Protein sequence
MLFRAGLVLLDNMDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTTSNHISCPCKRCNNAVLKTQDDVKADLL
Homology
BLAST of Chy11G192670 vs. ExPASy TrEMBL
Match:
A0A7N2LSD7 (Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 3.5e-11
Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 72
M+R+W+++ R L EY+ G++ FLDF F HTT + I CPCK+CNN KT+DDV+ADLL
Sbjct: 1 MERNWVKLRNRALLEYRQGIKDFLDFAFEHTTMGDKIYCPCKKCNNYFAKTRDDVEADLL 60
BLAST of Chy11G192670 vs. ExPASy TrEMBL
Match:
A0A7N2LJE8 (Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTTSNH-ISCPCKRCNNAVLKTQDDVKADLL 72
M+ +W+++ R L EY+ G++ FLDF F HTT + I CPCK+CNN KT+DDV+ADLL
Sbjct: 1 MEWNWVKLRNRALLEYRQGIKDFLDFAFEHTTMGYKIYCPCKKCNNYFAKTRDDVEADLL 60
BLAST of Chy11G192670 vs. ExPASy TrEMBL
Match:
A0A7N2KKH6 (Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTTSNH-ISCPCKRCNNAVLKTQDDVKADLL 72
M+ +W+++ R L EY+ G++ FLDF F HTT + I CPCK+CNN KT+DDV+ADLL
Sbjct: 1 MEWNWVKLRNRALLEYRQGIKDFLDFAFEHTTMGYKIYCPCKKCNNYFAKTRDDVEADLL 60
BLAST of Chy11G192670 vs. ExPASy TrEMBL
Match:
A0A2N9GUI6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30961 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 72
M+ +W++I R L EY+ GV+ FLDF F HTT + I CPCKRCN+ K++DDV+ADL+
Sbjct: 83 MEHNWVKIRNRALPEYRQGVKEFLDFAFEHTTMEDKILCPCKRCNHYFAKSRDDVEADLI 142
BLAST of Chy11G192670 vs. ExPASy TrEMBL
Match:
A0A2N9HCP8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 72
M+ +W++I R L EY+ GV+ FLDF F HTT + I CPCKRCN+ K++DDV+ADL+
Sbjct: 1 MEHNWVKIRNRALPEYRQGVKEFLDFAFEHTTMEDKILCPCKRCNHYFAKSRDDVEADLI 60
BLAST of Chy11G192670 vs. NCBI nr
Match:
XP_038882387.1 (uncharacterized protein LOC120073655 [Benincasa hispida])
HSP 1 Score: 105 bits (262), Expect = 1.50e-25
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTTSNHISCPCKRCNNAVLKTQDDVKADLL 71
MDRSWMQIG RVL+EY+NGVRSFLDF FMH T+ ISCPCKRCNN VLKT+D+V+ DLL
Sbjct: 1 MDRSWMQIGNRVLQEYRNGVRSFLDFAFMHATTTQISCPCKRCNNVVLKTRDNVEEDLL 59
BLAST of Chy11G192670 vs. NCBI nr
Match:
XP_030950831.1 (uncharacterized protein LOC115974558 [Quercus lobata])
HSP 1 Score: 74.3 bits (181), Expect = 1.50e-14
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTTSNH-ISCPCKRCNNAVLKTQDDVKADLL 71
M+ +W+++ R L EY+ G++ FLDF F HTT + I CPCK+CNN KT+DDV+ADLL
Sbjct: 1 MEWNWVKLRNRALLEYRQGIKDFLDFAFEHTTMGYKIYCPCKKCNNYFAKTRDDVEADLL 60
BLAST of Chy11G192670 vs. NCBI nr
Match:
XP_030953586.1 (uncharacterized protein LOC115976445 [Quercus lobata] >XP_030953587.1 uncharacterized protein LOC115976445 [Quercus lobata])
HSP 1 Score: 75.5 bits (184), Expect = 8.07e-14
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 71
M+ +W+++ +R EY+ GV+ FLDF F HTT N I CPCKRCNN KT+DDV+ DLL
Sbjct: 1 MEHNWVKLRSRAHPEYRQGVKDFLDFAFEHTTMGNKIFCPCKRCNNYFAKTRDDVEGDLL 60
BLAST of Chy11G192670 vs. NCBI nr
Match:
KAF3963785.1 (hypothetical protein CMV_011859 [Castanea mollissima])
HSP 1 Score: 75.1 bits (183), Expect = 1.10e-13
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 71
M+ +W+++ R L EY+ GV+ FLDF F HTT N CPCKRCNN KT+DDV+ DLL
Sbjct: 1 MEHNWVKLRNRALPEYRQGVKDFLDFAFEHTTMGNKNFCPCKRCNNYFAKTRDDVEGDLL 60
BLAST of Chy11G192670 vs. NCBI nr
Match:
XP_023893229.1 (uncharacterized protein LOC112005206 [Quercus suber])
HSP 1 Score: 75.1 bits (183), Expect = 1.10e-13
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 13 MDRSWMQIGTRVLEEYKNGVRSFLDFEFMHTT-SNHISCPCKRCNNAVLKTQDDVKADLL 71
M+ +W+++ R EY+ GV+ FLDF F HTT N I CPCKRCNN KT+DDV+ DLL
Sbjct: 1 MEHNWVKLRNRAHPEYRQGVKDFLDFAFEHTTMGNKIFCPCKRCNNYFAKTRDDVEGDLL 60
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A7N2LSD7 | 3.5e-11 | 55.00 | Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | [more] |
| A0A7N2LJE8 | 2.3e-10 | 53.33 | Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | [more] |
| A0A7N2KKH6 | 2.3e-10 | 53.33 | Kinesin motor domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | [more] |
| A0A2N9GUI6 | 2.9e-10 | 53.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30961 PE=4 SV=1 | [more] |
| A0A2N9HCP8 | 2.9e-10 | 53.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038882387.1 | 1.50e-25 | 77.97 | uncharacterized protein LOC120073655 [Benincasa hispida] | [more] |
| XP_030950831.1 | 1.50e-14 | 53.33 | uncharacterized protein LOC115974558 [Quercus lobata] | [more] |
| XP_030953586.1 | 8.07e-14 | 55.00 | uncharacterized protein LOC115976445 [Quercus lobata] >XP_030953587.1 uncharacte... | [more] |
| KAF3963785.1 | 1.10e-13 | 55.00 | hypothetical protein CMV_011859 [Castanea mollissima] | [more] |
| XP_023893229.1 | 1.10e-13 | 55.00 | uncharacterized protein LOC112005206 [Quercus suber] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
