Chy11G192380 (gene) Cucumber (hystrix) v1

Overview
NameChy11G192380
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranscription factor VOZ1-like
LocationchrH11: 8023177 .. 8025632 (-)
RNA-Seq ExpressionChy11G192380
SyntenyChy11G192380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAAGGGTTTGAAGAGTAAATGTCAATCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTTACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAGCAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTTGTAAGTTTTTTTTAAACTTATTTTCCTCTTTGCAAAGAATGTTTTTCTCTTCCATCACTTTTGTGTAATCTAAATGCCCTAAACATTCAATTAGGAGGGTAGTCTTGGATCATTCTCACAAGAGTTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGGCTGAACCTGAACTCCACTGCGTTCTTGGCAGCAATCCGTCAAATTTCGTACAGGTAGGCCTTTTCTTCGGTTTCTTTTTTGGTCAACTCCATGTTTCAGCGGGTGAATAATGTATTCACTGGCCTCTCTTATTCACAAACTCTCGGCATGGAATCAATCTAATCCAGCTTTTTCTTCATTTTCTTTTTTGGTCAACTCCATGTTTCAGCGGGTGAATAATGTATTCACTGGCCTCTCTTATTCACAAACTCTCGGCATGGAATCAGTCTAATCCAGCTTCTAGTGTAAAGGATTAATGGAGAAGTATTGCCAATTAAAGAAAATGCACAAAGCTTCTTAACCATTTAATAAATTTCTATTAACTACACTTGAGACCTAATCCTGTTGTGTTTTCTATTTTATGCCATTTGCTGAAAACTGGCTGGTTTCTCTTGAGACCCATTCTACAAAGCCCATCTTCTTCAAGCATGTGACTCTTTTTTATTGGATTAGTTGTTGTTTGCTTCTTATTTGTTATGCCAGTATCTGCATAACAGTTGTGAGAATTAAGGCTTATCAATTAATTCAACCTGATTTTTTTCTTCTTTTTTGTCATTATGGTATATGTGCTTCTATTTTTTTTGTTTGTGATTTTCTGTTTAAAGAAATTGATTTGGGCCATGTTACTTTAAAATAAAATGGTTAAAATGTGGAAATTTTGATGTAACCTCACAGTTCTTACCAACAAATCACAGCACATATGTCTGTCAAATGAGACTTTGAGCATCTGGTTTTCTGCCATCCTGAGAATGTATATATTTTGTAATCTAATAGATGCTAACTAGCTGAACTGATTCTGCCCCAGGATGGTTTTTGTATTTCAGAGCTCCAACACGAAAGTTTTTTCGGATTTGAGGAGTGCAAAGTGTCTCCTTTAGATCTTCAGAATTATTCATTTTACAAATCGGACATGGCTACTCAGTCTAATTGTCAAAGTTTCAAATTAGATCAAAACTTAGAGCAGACCACCGTGGTCAGTAAGGATGATATGTCTACTTTGAATTGCCATATATTGAATTCACAACCAGAGTTTGACTATGGGGTTCTTATTGGGGCATCGGATGTGGGAGACTTTAGTCGGGACACAAACCCCAGTATTCTCCCAAATATTGCACCCCAACCATCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGTCCTGGGGGAATTGGGTTTAAGGATGGTCCTTTGTTTGCTGCTCTTCAGGCAAAGACACAAGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCTCCATGGAATGCTCCGGGTAAAACCTTTATGTTGCTTTCTAACTTTTTCCTGTTGTCCTGATTTTTTTTTTTTTTGTTGTTTTATTTATTATAATTACTTGTTTTCCATTTTCCATTGACGCTCTTTATTCTGTCCTGGTGAGTTGTACCAATTGGTGTGTATTTATAGTGGTTATTTTCATTGTTGCAGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATTAGGGAATGGCTCTACTTCGATAAGCCTAGACGAGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAGTGGCCGTGGTTGGCATGAATCAAGAAAGCTAGTGATGAAGGAGTTTGGTGGTCAAAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCACTCTTGAATGGCATTTGTACGAGTATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAACATGCTGATACAAAAAAGAGTCCAAAGGGAAAATTGGCAGCGGATCCTCTGGCTGATCTTCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGCCCTGTTGAGCTTGGACAACAAGTTAAAGGCAAGATGGCGATGAAGACAAATAATTAA

mRNA sequence

ATGCCGAAGGGTTTGAAGAGTAAATGTCAATCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTTACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAGCAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTTGAGGGTAGTCTTGGATCATTCTCACAAGAGTTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGGCTGAACCTGAACTCCACTGCGTTCTTGGCAGCAATCCGTCAAATTTCGTACAGGATGGTTTTTGTATTTCAGAGCTCCAACACGAAAGTTTTTTCGGATTTGAGGAGTGCAAAGTGTCTCCTTTAGATCTTCAGAATTATTCATTTTACAAATCGGACATGGCTACTCAGTCTAATTGTCAAAGTTTCAAATTAGATCAAAACTTAGAGCAGACCACCGTGGTCAGTAAGGATGATATGTCTACTTTGAATTGCCATATATTGAATTCACAACCAGAGTTTGACTATGGGGTTCTTATTGGGGCATCGGATGTGGGAGACTTTAGTCGGGACACAAACCCCAGTATTCTCCCAAATATTGCACCCCAACCATCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGTCCTGGGGGAATTGGGTTTAAGGATGGTCCTTTGTTTGCTGCTCTTCAGGCAAAGACACAAGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCTCCATGGAATGCTCCGGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATTAGGGAATGGCTCTACTTCGATAAGCCTAGACGAGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAGTGGCCGTGGTTGGCATGAATCAAGAAAGCTAGTGATGAAGGAGTTTGGTGGTCAAAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCACTCTTGAATGGCATTTGTACGAGTATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAACATGCTGATACAAAAAAGAGTCCAAAGGGAAAATTGGCAGCGGATCCTCTGGCTGATCTTCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGCCCTGTTGAGCTTGGACAACAAGTTAAAGGCAAGATGGCGATGAAGACAAATAATTAA

Coding sequence (CDS)

ATGCCGAAGGGTTTGAAGAGTAAATGTCAATCTACTTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGACCTTCAAGGGATATTTACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACGTTGCTGTCTTGGAGGAGCAAGTCCATCAGATGCTCAGGGAGTGGAATGCTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTTGAGGGTAGTCTTGGATCATTCTCACAAGAGTTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACATTGGCTGAACCAAAGGCTGAACCTGAACTCCACTGCGTTCTTGGCAGCAATCCGTCAAATTTCGTACAGGATGGTTTTTGTATTTCAGAGCTCCAACACGAAAGTTTTTTCGGATTTGAGGAGTGCAAAGTGTCTCCTTTAGATCTTCAGAATTATTCATTTTACAAATCGGACATGGCTACTCAGTCTAATTGTCAAAGTTTCAAATTAGATCAAAACTTAGAGCAGACCACCGTGGTCAGTAAGGATGATATGTCTACTTTGAATTGCCATATATTGAATTCACAACCAGAGTTTGACTATGGGGTTCTTATTGGGGCATCGGATGTGGGAGACTTTAGTCGGGACACAAACCCCAGTATTCTCCCAAATATTGCACCCCAACCATCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGTCAGGACTATTGCAGTAGCTGTCATTCTGTTCTTGCTATAAACGAAGGCCTTCCTGGAATGATTCCAATATTGCGTCCTGGGGGAATTGGGTTTAAGGATGGTCCTTTGTTTGCTGCTCTTCAGGCAAAGACACAAGCCAAAGAAGTTGGAATACCCATATGTGATGGTGCTGCAACAAGGAAATCTCCATGGAATGCTCCGGAGCTTTTTGATATTACATTTCTTGAGGGGGAGACAATTAGGGAATGGCTCTACTTCGATAAGCCTAGACGAGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAGTGGCCGTGGTTGGCATGAATCAAGAAAGCTAGTGATGAAGGAGTTTGGTGGTCAAAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCACTCTTGAATGGCATTTGTACGAGTATGATATCACCAATTATGATTCATTCGCATTATATAGGCTGGAACTCAAACATGCTGATACAAAAAAGAGTCCAAAGGGAAAATTGGCAGCGGATCCTCTGGCTGATCTTCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGCCCTGTTGAGCTTGGACAACAAGTTAAAGGCAAGATGGCGATGAAGACAAATAATTAA

Protein sequence

MPKGLKSKCQSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDVAVLEEQVHQMLREWNAELNEPSPASSFVEGSLGSFSQELARLLEHCDEQDDATSTLAEPKAEPELHCVLGSNPSNFVQDGFCISELQHESFFGFEECKVSPLDLQNYSFYKSDMATQSNCQSFKLDQNLEQTTVVSKDDMSTLNCHILNSQPEFDYGVLIGASDVGDFSRDTNPSILPNIAPQPSAFMGPICALWDCFRPAQGSKWCQDYCSSCHSVLAINEGLPGMIPILRPGGIGFKDGPLFAALQAKTQAKEVGIPICDGAATRKSPWNAPELFDITFLEGETIREWLYFDKPRRAFESGNRKQRSLPDYSGRGWHESRKLVMKEFGGQKKSYYMDPQPSSTLEWHLYEYDITNYDSFALYRLELKHADTKKSPKGKLAADPLADLQKKMGRLTAEGPVELGQQVKGKMAMKTNN*
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SGQ01.0e-13257.74Transcription factor VOZ1 OS=Arabidopsis thaliana OX=3702 GN=VOZ1 PE=1 SV=1[more]
Q9SLB91.3e-10649.32Transcription factor VOZ2 OS=Arabidopsis thaliana OX=3702 GN=VOZ2 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A5A7VI894.7e-26696.77Transcription factor VOZ1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3CDY93.1e-26596.34Transcription factor VOZ1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C2S33.1e-26596.34transcription factor VOZ1-like OS=Cucumis melo OX=3656 GN=LOC103496002 PE=4 SV=1[more]
A0A0A0LT501.2e-24892.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415530 PE=4 SV=1[more]
A0A6J1FTK49.3e-23886.61transcription factor VOZ1-like OS=Cucurbita moschata OX=3662 GN=LOC111448675 PE=... [more]
Match NameE-valueIdentityDescription
XP_011649982.20.097.63transcription factor VOZ1 [Cucumis sativus] >XP_011649983.2 transcription factor... [more]
KAA0067448.10.096.77transcription factor VOZ1-like [Cucumis melo var. makuwa][more]
XP_008455940.10.096.34PREDICTED: transcription factor VOZ1-like [Cucumis melo] >TYK09550.1 transcripti... [more]
XP_038902747.10.093.98transcription factor VOZ1-like [Benincasa hispida] >XP_038902748.1 transcription... [more]
XP_023512678.11.16e-30087.04transcription factor VOZ1-like [Cucurbita pepo subsp. pepo] >XP_023512679.1 tran... [more]
Match NameE-valueIdentityDescription
AT1G28520.17.2e-13457.74vascular plant one zinc finger protein [more]
AT1G28520.27.2e-13457.74vascular plant one zinc finger protein [more]
AT2G42400.18.9e-10849.32vascular plant one zinc finger protein 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availablePANTHERPTHR33873:SF4TRANSCRIPTION FACTOR VOZ2coord: 1..463
IPR039277Transcription factor VOZ1/VOZ2PANTHERPTHR33873TRANSCRIPTION FACTOR VOZ1coord: 1..463

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G192380.1Chy11G192380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048578 positive regulation of long-day photoperiodism, flowering
biological_process GO:0006355 regulation of transcription, DNA-templated