Chy11G191920 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G191920
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Sodium Bile acid symporter family
Location	chrH11: 7175625 .. 7177639 (+)
RNA-Seq Expression	Chy11G191920
Synteny	Chy11G191920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCGTTCGTGGGAACCAAATCCCTCTATAGTCTTCTCGTTTCGTCTCATCGGAGCAATCCACCGGCCTTTTCTTTCCAACTTTCTCATTTCTCCTCTAATGTCGCACTCTTGCGTTCCACTTCTCTCGCTTTGAATCGCAAACGCCAAAGTTATAGTCCCATCAGTGCCTGCGGATTGCCCGATAAGGTTGTGTTCTCTCCCTTCGATTCTTTGTCGATGTTGAAACTCATACATCCACTTATTTTCTCTGCATGTAATGCCTTTAATACGAGATTTTATCACCGTGATTCAGAAAGACGATGGTGGAAGAATAAACGAACCTACCAGTGTTTCGGGTTCGGAAAATAGAGTTAGTTGGTTCGAGACCTTATCAACTTTTGCAAATAATAATTTTCTTCCTCTAGGTAAGTTAAATACTTATTGTTTCTTGTTTCCATTCAATTGAAATTATATTTATTCTGTCAGCTTACCGTATTTTTGTTCCTCAATTCAATATGTAGCTCTTGTCACTGGTGTAGCAGTTGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTTAGCACATTTGGGATATTTGTCATTTCAGGTTAGGAACTTTTATTAACTATTAACATGAAATGTATATTTTTTATGTAATCTTTATTTTATACGTGATGTGACTACTCAGGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTGGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTATGATTCTCACTTATAATCTTCCATTATATTTTTTGCTCGTAAGTTCATTCTTCGAGTATATTCGCATTTTCATATTGTTGATAATTAAGTTTTTCCCCCTTCATACTTTTCTTTTTTTGTATGTTACAGCCCATGCTTATACACTTTTCTAATGTTGGCAGAGTGACTTTCCACGCACTAAAAATCATTTTTTTTTATCTGTTTCATCATTTCCCGATGCGCATGTATTTGGAATGATAATGTGATTCGTGTACGTGACTTATTATTAGTCTAGACTTTTAACTGTTCATCCTGATTTAAGTACTTAGTTAACTAGTTTGAACAGGTTTTCTACAATGCAGTTGGATGTTTAAGTTTTGTACACTGAATTTGGATGCTTGAGTTGCAGATACCTTTGGGGGTGTGATGGTTGCTCTTTTTAGAAATTACAATCCTCATGGTTGACATAAATGAAGGGATCTAAGAGATTATTACAAGAAATAACTCGAAATTGGATCTTGATCTTTCTGACTGTTCCTTTCTAAAGTAACAAGGATGTTTTCTTGTCTCTCATTTCTTTTCCAAATAAATTGACTACCCTTGTTCATGAGATTTTATGGCATATCCAATGCATGGGTATCATTTGCACTGCTGTATTCCGGTATATTTGTTGAGCTTTTATTCACTCTCTCTTTCTATTGTTTTTTGTCAGGTTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATAATGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGGTTTGTTTATGAAATTATTTTTAGCCGTTGAATGACAGGTTAGAAATTCCATCATACATCCCTTATCCCAAAAAAAAGGACCGTTTAGCTATTTAGATATTCTTGGTCCATCTTCTGCTTGAAAATTGAAGTTTCTAGCTTCATGATGAATGTGTACTACTTTTAAACTATCATTTGTTGTGTTTAGAGAAATAAAATTAGAACTATTACATGCAATTTTAAAATGAGGTATATTTTGATAATACTTGCAGTAGCTGAAAATTCTAAATGGTTTTCTTTTAGAAGATGAACATTATCTTGGTATAATATTAATTTGGAATGGATAGTCGTCGTTTTATCAAGAGTTTGATCTAATAAAGGTTTGTGCAGTGGCCTATATGCATCCTGGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATTCAATGGACCATTTGTGTGGATAAATGAAAAATCAGTTAGG

mRNA sequence

ATGGCTATGGCGTTCGTGGGAACCAAATCCCTCTATAGTCTTCTCGTTTCGTCTCATCGGAGCAATCCACCGGCCTTTTCTTTCCAACTTTCTCATTTCTCCTCTAATGTCGCACTCTTGCGTTCCACTTCTCTCGCTTTGAATCGCAAACGCCAAAGTTATAGTCCCATCAGTGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGAATAAACGAACCTACCAGTGTTTCGGGTTCGGAAAATAGAGTTAGTTGGTTCGAGACCTTATCAACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCAGTTGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTTAGCACATTTGGGATATTTGTCATTTCAGGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTGGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATAATGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGTGGCCTATATGCATCCTGGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATTCAATGGACCATTTGTGTGGATAAATGAAAAATCAGTTAGG

Coding sequence (CDS)

ATGGCTATGGCGTTCGTGGGAACCAAATCCCTCTATAGTCTTCTCGTTTCGTCTCATCGGAGCAATCCACCGGCCTTTTCTTTCCAACTTTCTCATTTCTCCTCTAATGTCGCACTCTTGCGTTCCACTTCTCTCGCTTTGAATCGCAAACGCCAAAGTTATAGTCCCATCAGTGCCTGCGGATTGCCCGATAAGAAAGACGATGGTGGAAGAATAAACGAACCTACCAGTGTTTCGGGTTCGGAAAATAGAGTTAGTTGGTTCGAGACCTTATCAACTTTTGCAAATAATAATTTTCTTCCTCTAGCTCTTGTCACTGGTGTAGCAGTTGGAGTTGCAAATCCAAGTCTTGGATGTCTTGCTGATAGGTATTATCTCTCAAAGTTTAGCACATTTGGGATATTTGTCATTTCAGGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTGGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTTTCGATTCTTTTGCTTACTCCATACTTTTCCAGGCTGATAATGCAAATTCATCTTCAACCTCAAGAATTTGTAACAGTGGCCTATATGCATCCTGGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATTCAATGGACCATTTGTGTGGATAAATGAAAAATCAGTTAGG

Protein sequence

MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVTVAYMHPGIYYSVIQLALRPSTKFNGPFVWINEKSVR

Homology

[Close]

BLAST of Chy11G191920 vs. ExPASy Swiss-Prot
Match: F4IZC4 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-31
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 58  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSL 117
           S+CG  ++   GG       +S S  R+ + + L +FA++NFLPLALV+GV +G ANP+L
Sbjct: 72  SSCGEWNRIHLGG----DGGISASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPTL 131

Query: 118 GCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQ 177
           GCLAD+Y  +K ST GIF+ISGLTLRT  I A+V+ WP+ ++GL+SILLLTP FSRLIM 
Sbjct: 132 GCLADKYSFTKISTCGIFIISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIML 191

Query: 178 IHLQPQEFVT 188
           + LQP+E VT
Sbjct: 192 VQLQPRELVT 197

[Close]

BLAST of Chy11G191920 vs. ExPASy Swiss-Prot
Match: B8AJ09 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 68  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLS 127
           DG +   P + S S         L  FA +NFLPLAL+ G+A+ + +P+LGCLA +Y LS
Sbjct: 70  DGAKRPAPAAASSSLG-----AALVGFARSNFLPLALIAGIALALMDPTLGCLAHKYSLS 129

Query: 128 KFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT 187
           K+STFGIF+ISGLTLRT E+ A++EAWP  ++GL SILL TP+ ++ IMQI   P EF+T
Sbjct: 130 KYSTFGIFLISGLTLRTKELGAALEAWPAGLFGLASILLFTPFLAQFIMQIKFFPHEFIT 184

[Close]

BLAST of Chy11G191920 vs. ExPASy Swiss-Prot
Match: Q6ESG1 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 68  DGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLADRYYLS 127
           DG +   P + S S         L  FA +NFLPLAL+ G+A+ + +P+LGCLA +Y LS
Sbjct: 70  DGAKRPAPAAASSSLG-----AALVGFARSNFLPLALIAGIALALMDPTLGCLAHKYSLS 129

Query: 128 KFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQPQEFVT 187
           K+STFGIF+ISGLTLRT E+ A++EAWP  ++GL SILL TP+ ++ IMQI   P EF+T
Sbjct: 130 KYSTFGIFLISGLTLRTKELGAALEAWPAGLFGLASILLFTPFLAQFIMQIKFFPHEFIT 184

[Close]

BLAST of Chy11G191920 vs. ExPASy TrEMBL
Match: A0A0A0LN64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.7e-92
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSLYSLLV SHRSNPPAFSFQ+SHFSSNVALL STSLALNRKR+SY PI AC
Sbjct: 1   MAMAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEPTSVSGSE RVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 188
           QPQEFVT
Sbjct: 181 QPQEFVT 187

[Close]

BLAST of Chy11G191920 vs. ExPASy TrEMBL
Match: A0A5A7TB17 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00080 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 188
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. ExPASy TrEMBL
Match: A0A5D3DKR1 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00180 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 188
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. ExPASy TrEMBL
Match: A0A1S3C1I1 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 188
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. ExPASy TrEMBL
Match: A0A1S3C366 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.4e-89
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 188
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. NCBI nr
Match: XP_004151888.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] >KGN63253.1 hypothetical protein Csa_022589 [Cucumis sativus])

HSP 1 Score: 349 bits (895), Expect = 1.40e-116
Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSLYSLLV SHRSNPPAFSFQ+SHFSSNVALL STSLALNRKR+SY PI AC
Sbjct: 1   MAMAFVGTKSLYSLLVLSHRSNPPAFSFQISHFSSNVALLPSTSLALNRKRRSYCPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEPTSVSGSE RVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPTSVSGSEKRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 187
           QPQEFVT
Sbjct: 181 QPQEFVT 187

[Close]

BLAST of Chy11G191920 vs. NCBI nr
Match: XP_008455872.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 339 bits (870), Expect = 3.86e-113
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 187
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. NCBI nr
Match: XP_008455871.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo] >TYK24216.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 339 bits (870), Expect = 8.04e-113
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 187
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. NCBI nr
Match: KAA0040654.1 (putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 339 bits (870), Expect = 8.84e-113
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MAMAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISAC 60
           MAMAFVGTKSL+   VSSHRSNPPAFSFQ+SHFS NVALLRSTSLALNRKRQSYSPI AC
Sbjct: 1   MAMAFVGTKSLFH--VSSHRSNPPAFSFQISHFSYNVALLRSTSLALNRKRQSYSPIRAC 60

Query: 61  GLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCL 120
           GLPDKKDDGGRINEP SVSGSENRVSW ETLSTFANNNFLPLALVTGVAVG+ANPSLGCL
Sbjct: 61  GLPDKKDDGGRINEPASVSGSENRVSWLETLSTFANNNFLPLALVTGVAVGIANPSLGCL 120

Query: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHL 180
           ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLI+QIHL
Sbjct: 121 ADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLILQIHL 180

Query: 181 QPQEFVT 187
            PQEFVT
Sbjct: 181 HPQEFVT 185

[Close]

BLAST of Chy11G191920 vs. NCBI nr
Match: XP_038900991.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida])

HSP 1 Score: 325 bits (834), Expect = 2.27e-107
Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 3   MAFVGTKSLYSLLVSSHRSNPPAFSFQLSHFSSNVALLRSTSLALNRKRQSYSPISACGL 62
           MA VGTKSL+SLLVSSHRSNPPAF  Q+S +SSN A L S+SLALNRKRQ YSPI ACGL
Sbjct: 1   MALVGTKSLHSLLVSSHRSNPPAFCLQISRYSSNGAPLGSSSLALNRKRQIYSPIRACGL 60

Query: 63  PDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSLGCLAD 122
           PDKKDDGGRINEP SVSGSENRV+WFE LSTFANNNFLPLALVTGVAVGVANPSLGCLAD
Sbjct: 61  PDKKDDGGRINEPASVSGSENRVTWFEALSTFANNNFLPLALVTGVAVGVANPSLGCLAD 120

Query: 123 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQIHLQP 182
           RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGL SILLLTPYFSRLI+QIHLQP
Sbjct: 121 RYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLASILLLTPYFSRLILQIHLQP 180

Query: 183 QEFVT 187
           QEFVT
Sbjct: 181 QEFVT 185

[Close]

BLAST of Chy11G191920 vs. TAIR 10
Match: AT3G56160.1 (Sodium Bile acid symporter family )

HSP 1 Score: 136.0 bits (341), Expect = 3.8e-32
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 58  SACGLPDKKDDGGRINEPTSVSGSENRVSWFETLSTFANNNFLPLALVTGVAVGVANPSL 117
           S+CG  ++   GG       +S S  R+ + + L +FA++NFLPLALV+GV +G ANP+L
Sbjct: 72  SSCGEWNRIHLGG----DGGISASAQRLYFGKELLSFASDNFLPLALVSGVGLGFANPTL 131

Query: 118 GCLADRYYLSKFSTFGIFVISGLTLRTSEISASVEAWPVAVYGLVSILLLTPYFSRLIMQ 177
           GCLAD+Y  +K ST GIF+ISGLTLRT  I A+V+ WP+ ++GL+SILLLTP FSRLIM 
Sbjct: 132 GCLADKYSFTKISTCGIFIISGLTLRTEAIGAAVKGWPLGLFGLISILLLTPSFSRLIML 191

Query: 178 IHLQPQEFVT 188
           + LQP+E VT
Sbjct: 192 VQLQPRELVT 197

The following BLAST results are available for this feature:

BLAST of Chy11G191920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IZC4	5.4e-31	55.38	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis tha...	[more]
B8AJ09	1.2e-27	52.50	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]
Q6ESG1	1.2e-27	52.50	Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su...	[more]

BLAST of Chy11G191920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN64	5.7e-92	95.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418880 PE=4 SV=1	[more]
A0A5A7TB17	3.4e-89	93.58	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3DKR1	3.4e-89	93.58	Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3C1I1	3.4e-89	93.58	probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucu...	[more]
A0A1S3C366	3.4e-89	93.58	probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucu...	[more]

BLAST of Chy11G191920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151888.1	1.40e-116	95.72	probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] ...	[more]
XP_008455872.1	3.86e-113	93.58	PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform...	[more]
XP_008455871.1	8.04e-113	93.58	PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform...	[more]
KAA0040654.1	8.84e-113	93.58	putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa]	[more]
XP_038900991.1	2.27e-107	90.27	probable sodium/metabolite cotransporter BASS4, chloroplastic [Benincasa hispida...	[more]

BLAST of Chy11G191920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56160.1	3.8e-32	55.38	Sodium Bile acid symporter family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 82..206 e-value: 4.7E-11 score: 44.2
IPR016833	Putative sodium bile acid cotransporter	PFAM	PF13593	SBF_like	coord: 100..178 e-value: 5.4E-6 score: 25.9
IPR016833	Putative sodium bile acid cotransporter	PANTHER	PTHR18640	SOLUTE CARRIER FAMILY 10 MEMBER 7	coord: 65..187
None	No IPR available	PANTHER	PTHR18640:SF12	SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED	coord: 65..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G191920.1	Chy11G191920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane