Chy11G187410 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G187410
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Thioredoxin-like protein YLS8
Location	chrH11: 1585970 .. 1587345 (+)
RNA-Seq Expression	Chy11G187410
Synteny	Chy11G187410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGTGTCACTCTTCGATAATGAGATCTCAGGAAAAAGGATTGTAGCCTTTGGTATAATTGGCCAAAGGTCAGTGTGATGAGTCTTGAGGCAGATATTGGGGCTTTCGGTATATATGATTGAAGGCCAATACATTGAGTCATTGAGTTTTTGGGTATAAATGGTCAAGGGACTTGAGGCCTCAGGTATAAATAGTTAAGGATCAAACATTGAGTTCTTTAGAGCAGTGTGGAAGAGTTTGATACGGGAGAATGCTAGAAAGAGTCATGGGGACTCGGTGATGTTTGAGAAAGTTTGGGATGAGCATGCATGATGATATAATTTAGATCACGAGTTGAATAGTTAATAAAGTCACACATATTATTCATTTTCGTATATGCTGTATTGTATGAGTAACTTGCATTTGAGAAGCATGTTTTGATGTATGTTATACGTTGTTTGTCACTCGTTAGGTGGAAGCTAGTTACTGAGCAAGAGATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAGGCAATCCTTGCAGAAGAAGAACGTCTTGTGGTCATTCGTTTCGGTCATGATTGGGATGAAACTTGTATGCAGGTCTTTATCTCTTCCATTCCATAATCTTCCATTCCTCTTTCTCAGCATAATTGGTTCATCATCAAATTTAATGTTGACCATGTTGTGTGTCTCTCTCTCTCTGAACTTCTTTATTCTTCTTCTTGCTTCCAACGAACTGAGTTTATTTTGTTCTGGTTTTTAGTTTCACAAAAAAAGTTTCTATCATCGTGTGTTCTGGTGCAACTGTGCTTCTGGCAAGTTCTCTATAATCATGCGTTCCTACTTGTTTTTAGTATGTAGTATGTACCAAAGATGAAGTTTCTTCATCCCAGTTATGAACTATGATTTTTTTGGTGCATGATTTGTTTTGAATCCTTTTCCCTCTTTTTATGTTAAATATGATCACAGTTCTTCTATCTTACATGTTAAAGATTGGGAAGATGAAGATCCTTATGTTTCTTTTTTCTTGAGATGTTTTATCTGATTGAGATGTTTTTGTTGTAGATGGATGAAGTGTTGGCCTCAGTTGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCTGATTTCAACACAATGTACGAGCTGTATGATCCATCCACTGTTATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTGTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCCAAGGACTATTCGACCAAATATCGCTACTAA

mRNA sequence

ATGGAAAATGTGTCACTCTTCGATAATGAGATCTCAGGAAAAAGGATTGTAGCCTTTGGTATAATTGGCCAAAGGTGGAAGCTAGTTACTGAGCAAGAGATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAGGCAATCCTTGCAGAAGAAGAACGTCTTGTGGTCATTCGTTTCGGTCATGATTGGGATGAAACTTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCTGATTTCAACACAATGTACGAGCTGTATGATCCATCCACTGTTATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTGTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCCAAGGACTATTCGACCAAATATCGCTACTAA

Coding sequence (CDS)

ATGGAAAATGTGTCACTCTTCGATAATGAGATCTCAGGAAAAAGGATTGTAGCCTTTGGTATAATTGGCCAAAGGTGGAAGCTAGTTACTGAGCAAGAGATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAGGCAATCCTTGCAGAAGAAGAACGTCTTGTGGTCATTCGTTTCGGTCATGATTGGGATGAAACTTGTATGCAGATGGATGAAGTGTTGGCCTCAGTTGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCTGATTTCAACACAATGTACGAGCTGTATGATCCATCCACTGTTATGTTCTTCTTTAGGAACAAGCACATAATGATTGATCTTGGTACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTGTATCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCCAAGGACTATTCGACCAAATATCGCTACTAA

Protein sequence

MENVSLFDNEISGKRIVAFGIIGQRWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY*

Homology

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BLAST of Chy11G187410 vs. ExPASy Swiss-Prot
Match: Q9FE62 (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.2e-79
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 176
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

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BLAST of Chy11G187410 vs. ExPASy Swiss-Prot
Match: P83876 (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-71
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 176
           RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142

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BLAST of Chy11G187410 vs. ExPASy Swiss-Prot
Match: P83877 (Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-71
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 176
           RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142

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BLAST of Chy11G187410 vs. ExPASy Swiss-Prot
Match: P87215 (Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dim1 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.9e-62
Identity = 109/142 (76.76%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSY LPHLHSGW VDQAIL+E+ERLVVIRFG D DE C++ DEVL  +AE + N AVIYL
Sbjct: 1   MSYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNKINW L+DKQE IDIIET++
Sbjct: 61  VDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIETIF 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 176
           RGARKG+GLVI+PKDYST++RY
Sbjct: 121 RGARKGKGLVISPKDYSTRHRY 142

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BLAST of Chy11G187410 vs. ExPASy Swiss-Prot
Match: Q75BD8 (Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DIB1 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-51
Identity = 93/138 (67.39%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 35  SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLV 94
           S  LPHLHSGW VDQAI+ EEERLVVIRFG D D +CM MDE+L S+AE + NFA IY+ 
Sbjct: 3   SVFLPHLHSGWHVDQAIVTEEERLVVIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIYVC 62

Query: 95  DITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVYR 154
           D TEVPDFN MYEL DP TVMFF++NKH+  D GTGNNNK+N+ + +KQE IDIIETV+R
Sbjct: 63  DTTEVPDFNEMYELQDPMTVMFFYKNKHMRCDFGTGNNNKMNFVVDNKQEMIDIIETVFR 122

Query: 155 GARKGRGLVIAPKDYSTK 173
           GAR+ +GLV++P DY+ K
Sbjct: 123 GARRNKGLVVSPYDYNYK 140

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BLAST of Chy11G187410 vs. ExPASy TrEMBL
Match: A0A5D3BID1 (Thioredoxin-like protein YLS8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00480 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 25  RWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET 84
           +WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET
Sbjct: 39  KWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET 98

Query: 85  IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 144
           IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE
Sbjct: 99  IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 158

Query: 145 FIDIIETVYRGARKGRGLVIAPKDYSTKYRY 176
           FIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 159 FIDIIETVYRGARKGRGLVIAPKDYSTKYRY 189

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BLAST of Chy11G187410 vs. ExPASy TrEMBL
Match: A0A5A7TWZ9 (Thioredoxin-like protein YLS8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003210 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-82
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 26  WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI 85
           WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI
Sbjct: 12  WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI 71

Query: 86  KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 145
           KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF
Sbjct: 72  KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 131

Query: 146 IDIIETVYRGARKGRGLVIAPKDYSTKYRY 176
           IDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 132 IDIIETVYRGARKGRGLVIAPKDYSTKYRY 161

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BLAST of Chy11G187410 vs. ExPASy TrEMBL
Match: A0A5N6LHX1 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_42382 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78
Identity = 142/145 (97.93%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 31  EQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAV 90
           E+EMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAV
Sbjct: 325 EEEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAV 384

Query: 91  IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIE 150
           IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWA+KDKQEFIDI+E
Sbjct: 385 IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVE 444

Query: 151 TVYRGARKGRGLVIAPKDYSTKYRY 176
           TVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 445 TVYRGARKGRGLVIAPKDYSTKYRY 469

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BLAST of Chy11G187410 vs. ExPASy TrEMBL
Match: A0A1J3DF14 (Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR21189_c0_g1_i1_g.70234 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.8e-78
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 24  QRWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE 83
           ++ K +  + MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE
Sbjct: 28  EKLKQIEIERMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE 87

Query: 84  TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 143
           TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ
Sbjct: 88  TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 147

Query: 144 EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 176
           EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 148 EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 179

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BLAST of Chy11G187410 vs. ExPASy TrEMBL
Match: A0A1J3IZG5 (Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR24166_c0_g1_i1_g.70258 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.8e-78
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 24  QRWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE 83
           ++ K +  + MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE
Sbjct: 21  EKLKQIEIERMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAE 80

Query: 84  TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 143
           TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ
Sbjct: 81  TIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQ 140

Query: 144 EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 176
           EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 141 EFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 172

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BLAST of Chy11G187410 vs. NCBI nr
Match: KAA0045799.1 (Thioredoxin-like protein YLS8 [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 1.45e-106
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 26  WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI 85
           WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI
Sbjct: 12  WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETI 71

Query: 86  KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 145
           KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF
Sbjct: 72  KNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEF 131

Query: 146 IDIIETVYRGARKGRGLVIAPKDYSTKYRY 175
           IDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 132 IDIIETVYRGARKGRGLVIAPKDYSTKYRY 161

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BLAST of Chy11G187410 vs. NCBI nr
Match: TYJ99482.1 (Thioredoxin-like protein YLS8 [Cucumis melo var. makuwa])

HSP 1 Score: 312 bits (800), Expect = 1.90e-106
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 25  RWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET 84
           +WKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET
Sbjct: 39  KWKLVTEQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAET 98

Query: 85  IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 144
           IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE
Sbjct: 99  IKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 158

Query: 145 FIDIIETVYRGARKGRGLVIAPKDYSTKYRY 175
           FIDIIETVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 159 FIDIIETVYRGARKGRGLVIAPKDYSTKYRY 189

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BLAST of Chy11G187410 vs. NCBI nr
Match: RZC56849.1 (hypothetical protein C5167_015697 [Papaver somniferum])

HSP 1 Score: 296 bits (757), Expect = 3.64e-100
Identity = 142/145 (97.93%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 31  EQEMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAV 90
           +Q MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVL+SVAETIKNFAV
Sbjct: 27  KQRMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAV 86

Query: 91  IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIE 150
           IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIE
Sbjct: 87  IYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIE 146

Query: 151 TVYRGARKGRGLVIAPKDYSTKYRY 175
           TVYRGARKGRGLVIAPKDYSTKYRY
Sbjct: 147 TVYRGARKGRGLVIAPKDYSTKYRY 171

[Close]

BLAST of Chy11G187410 vs. NCBI nr
Match: XP_004148041.1 (thioredoxin-like protein YLS8 [Cucumis sativus] >XP_004497782.1 thioredoxin-like protein YLS8 isoform X2 [Cicer arietinum] >XP_006288859.1 thioredoxin-like protein YLS8 [Capsella rubella] >XP_006399318.1 thioredoxin-like protein YLS8 [Eutrema salsugineum] >XP_008457801.1 PREDICTED: thioredoxin-like protein YLS8 [Cucumis melo] >XP_010452811.1 PREDICTED: thioredoxin-like protein YLS8 [Camelina sativa] >XP_010491455.1 PREDICTED: thioredoxin-like protein YLS8 [Camelina sativa] >XP_012459864.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium raimondii] >XP_015894288.1 thioredoxin-like protein YLS8 [Ziziphus jujuba] >XP_015961428.1 thioredoxin-like protein YLS8 isoform X1 [Arachis duranensis] >XP_015961429.1 thioredoxin-like protein YLS8 isoform X1 [Arachis duranensis] >XP_016198827.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198828.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198829.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198830.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198831.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_017612852.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium arboreum] >XP_019420159.1 PREDICTED: thioredoxin-like protein YLS8 [Lupinus angustifolius] >XP_019439280.1 PREDICTED: thioredoxin-like protein YLS8 [Lupinus angustifolius] >XP_021632944.1 thioredoxin-like protein YLS8 [Manihot esculenta] >XP_021674120.1 thioredoxin-like protein YLS8 [Hevea brasiliensis] >XP_021674917.1 thioredoxin-like protein YLS8 [Hevea brasiliensis] >XP_022139323.1 thioredoxin-like protein YLS8 isoform X1 [Momordica charantia] >XP_022153368.1 thioredoxin-like protein YLS8 [Momordica charantia] >XP_022153369.1 thioredoxin-like protein YLS8 [Momordica charantia] >XP_022927978.1 thioredoxin-like protein YLS8 [Cucurbita moschata] >XP_022927979.1 thioredoxin-like protein YLS8 [Cucurbita moschata] >XP_022971679.1 thioredoxin-like protein YLS8 [Cucurbita maxima] >XP_022971680.1 thioredoxin-like protein YLS8 [Cucurbita maxima] >XP_023513106.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513107.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513108.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_024007091.1 thioredoxin-like protein YLS8 [Eutrema salsugineum] >XP_025649101.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649102.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649103.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649104.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025695902.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025695903.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_028767038.1 thioredoxin-like protein YLS8 [Prosopis alba] >XP_028787801.1 thioredoxin-like protein YLS8 [Prosopis alba] >XP_029153776.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_031737353.1 thioredoxin-like protein YLS8 [Cucumis sativus] >XP_038902874.1 thioredoxin-like protein YLS8 [Benincasa hispida] >XP_038902875.1 thioredoxin-like protein YLS8 [Benincasa hispida] >XP_039013197.1 thioredoxin-like protein YLS8 [Hibiscus syriacus] >XP_039019395.1 thioredoxin-like protein YLS8 [Hibiscus syriacus] >XP_039047757.1 thioredoxin-like protein YLS8 [Hibiscus syriacus] >XP_039137675.1 thioredoxin-like protein YLS8 [Dioscorea cayenensis subsp. rotundata] >AGH25793.1 YLS8 [Gossypium hirsutum] >KAA3463630.1 thioredoxin-like protein YLS8 [Gossypium australe] >KAB2035695.1 hypothetical protein ES319_D04G171200v1 [Gossypium barbadense] >KAE9594226.1 putative Dim1 family, thioredoxin-like protein [Lupinus albus] >KAG6571422.1 Thioredoxin-like protein YLS8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011188.1 Thioredoxin-like protein YLS8, partial [Cucurbita argyrosperma subsp. argyrosperma] >MBA0630926.1 hypothetical protein [Gossypium davidsonii] >MBA0666643.1 hypothetical protein [Gossypium klotzschianum] >OVA18434.1 mRNA splicing factor [Macleaya cordata] >RWR92604.1 thioredoxin-like protein YLS8 [Cinnamomum micranthum f. kanehirae] >TYG74413.1 hypothetical protein ES288_D04G181300v1 [Gossypium darwinii] >TYH77829.1 hypothetical protein ES332_D04G182700v1 [Gossypium tomentosum] >TYI87952.1 hypothetical protein E1A91_D04G173100v1 [Gossypium mustelinum] >CAA2627361.1 unnamed protein product [Spirodela intermedia] >CAA7027004.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 295 bits (754), Expect = 3.85e-100
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 175
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

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BLAST of Chy11G187410 vs. NCBI nr
Match: NP_001341033.1 (DIM 1-like protein [Glycine max] >XP_002283622.1 PREDICTED: thioredoxin-like protein YLS8 [Vitis vinifera] >XP_002310072.1 thioredoxin-like protein YLS8 isoform X1 [Populus trichocarpa] >XP_002529724.1 thioredoxin-like protein YLS8 [Ricinus communis] >XP_003554015.1 thioredoxin-like protein YLS8 [Glycine max] >XP_007043276.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Theobroma cacao] >XP_009407394.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_009413118.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_010067004.1 thioredoxin-like protein YLS8 isoform X1 [Eucalyptus grandis] >XP_010274887.1 PREDICTED: thioredoxin-like protein YLS8 [Nelumbo nucifera] >XP_011002244.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_011002246.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_012066576.1 thioredoxin-like protein YLS8 [Jatropha curcas] >XP_020202007.1 thioredoxin-like protein YLS8 [Cajanus cajan] >XP_020524920.1 thioredoxin-like protein YLS8 [Amborella trichopoda] >XP_021294002.1 thioredoxin-like protein YLS8 [Herrania umbratica] >XP_022726013.1 thioredoxin-like protein YLS8 [Durio zibethinus] >XP_022743304.1 thioredoxin-like protein YLS8 [Durio zibethinus] >XP_027360456.1 thioredoxin-like protein YLS8 [Abrus precatorius] >XP_028219104.1 thioredoxin-like protein YLS8 [Glycine soja] >XP_028248086.1 thioredoxin-like protein YLS8 [Glycine soja] >XP_030457582.1 thioredoxin-like protein YLS8 isoform X1 [Syzygium oleosum] >XP_030547602.1 thioredoxin-like protein YLS8 isoform X1 [Rhodamnia argentea] >XP_031272353.1 thioredoxin-like protein YLS8 isoform X1 [Pistacia vera] >XP_031380585.1 thioredoxin-like protein YLS8 isoform X1 [Punica granatum] >XP_034686832.1 thioredoxin-like protein YLS8 [Vitis riparia] >XP_034915705.1 thioredoxin-like protein YLS8 [Populus alba] >KAA8528915.1 hypothetical protein F0562_033597 [Nyssa sinensis] >KAF8021739.1 hypothetical protein BT93_G2016 [Corymbia citriodora subsp. variegata] >KAF9599116.1 hypothetical protein IFM89_035395 [Coptis chinensis] >PON34927.1 Thioredoxin-like protein [Parasponia andersonii] >POO03557.1 Thioredoxin-like protein [Trema orientale] >RDX77683.1 Thioredoxin-like protein YLS8 [Mucuna pruriens] >THU69300.1 hypothetical protein C4D60_Mb08t12990 [Musa balbisiana] >TKY69085.1 Thioredoxin protein YLS8 [Spatholobus suberectus] >GAV72260.1 DIM1 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 294 bits (753), Expect = 5.47e-100
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 175
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

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BLAST of Chy11G187410 vs. TAIR 10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-80
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 34  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 93
           MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 94  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 153
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 154 RGARKGRGLVIAPKDYSTKYRY 176
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

[Close]

BLAST of Chy11G187410 vs. TAIR 10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 33  EMSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIY 92
           EMSYLL  L +   +D+ I    + ++V+RFG   D  C+Q DE+LA     +  FA + 
Sbjct: 8   EMSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVA 67

Query: 93  LVDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI 152
           LVD+ +  D     + +D    PST+ FFF   H+ +D GT ++ K   A   KQ+FID+
Sbjct: 68  LVDV-DSEDVQVYVKYFDITLFPSTI-FFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDV 127

Query: 153 IETVYRGARKGRGLVIAP 167
           +E +YRGA KG+ +V  P
Sbjct: 128 VEAIYRGAMKGKMIVQCP 143

The following BLAST results are available for this feature:

BLAST of Chy11G187410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FE62	3.2e-79	99.30	Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1	[more]
P83876	2.5e-71	85.92	Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1	[more]
P83877	2.5e-71	85.92	Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1	[more]
P87215	7.9e-62	76.76	Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]
Q75BD8	2.2e-51	67.39	Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / F...	[more]

BLAST of Chy11G187410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BID1	1.4e-82	99.34	Thioredoxin-like protein YLS8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TWZ9	2.5e-82	100.00	Thioredoxin-like protein YLS8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5N6LHX1	3.7e-78	97.93	Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_42382 PE=3 SV=1	[more]
A0A1J3DF14	4.8e-78	94.08	Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA...	[more]
A0A1J3IZG5	4.8e-78	94.08	Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP...	[more]

BLAST of Chy11G187410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045799.1	1.45e-106	100.00	Thioredoxin-like protein YLS8 [Cucumis melo var. makuwa]	[more]
TYJ99482.1	1.90e-106	99.34	Thioredoxin-like protein YLS8 [Cucumis melo var. makuwa]	[more]
RZC56849.1	3.64e-100	97.93	hypothetical protein C5167_015697 [Papaver somniferum]	[more]
XP_004148041.1	3.85e-100	100.00	thioredoxin-like protein YLS8 [Cucumis sativus] >XP_004497782.1 thioredoxin-like...	[more]
NP_001341033.1	5.47e-100	99.30	DIM 1-like protein [Glycine max] >XP_002283622.1 PREDICTED: thioredoxin-like pro...	[more]

BLAST of Chy11G187410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08290.1	2.3e-80	99.30	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]
AT3G24730.1	1.5e-20	38.41	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004123	Dim1 family	SMART	SM01410	DIM1_2	coord: 37..169 e-value: 1.4E-97 score: 340.1
IPR004123	Dim1 family	PIRSF	PIRSF017199	Dim1	coord: 34..175 e-value: 1.1E-74 score: 246.5
IPR004123	Dim1 family	PFAM	PF02966	DIM1	coord: 37..169 e-value: 4.9E-67 score: 223.7
IPR004123	Dim1 family	PANTHER	PTHR12052	THIOREDOXIN-LIKE PROTEN 4A, 4B	coord: 21..175
IPR004123	Dim1 family	CDD	cd02954	DIM1	coord: 43..156 e-value: 3.1126E-77 score: 224.096
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 34..174 e-value: 1.4E-79 score: 266.5
None	No IPR available	PANTHER	PTHR12052:SF9	SUBFAMILY NOT NAMED	coord: 21..175
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G187410.1	Chy11G187410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
cellular_component	GO:0005682	U5 snRNP
molecular_function	GO:0005515	protein binding