Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGTAACACCTCTCTTTAAATACCTCTCTTTCATTTATTATTTCTTTCTTTGAAATATTATTTAATGGGGTTGGTACAACGTACGTGGAGGAAAGTTTTAACTGTTTGCAACAATCTTAGATCGTTATAGAATGATCTCATTGAATATATATTTTTTTTTATAGAAATGAGTTTTCTTTTTTTCTTTTTCTTCTTGTCCACTCATGACGTGATAAGAGATATGTTTTAATTCACCTGTTAGTTGATGTATATGTGTGCATGGATTGTTGTTTATGTTTAAAACACTGATCTGGTTTTAGAACTTTTAAGAACCTTGCATTTATTTATTTTCTATTCATAAAATACTTCGTATTGTAATTGTGAACTTCTCTAACTCATCTAATTAGATTTTTTTATTTTTTTGAAAAGGTAATTAGATGTTAATTTTGTATGTTAAGAAGTTGCATGCAACATAATTGGATTATTTAGTCTTCTTGGTAACCAATTTCATTTAACTTATTTCTTCTCAATTTCAATTCAAAACAACAAAAACCCTAAAAACAACTTGAATTATCTAATTGAAAACCCTAAAAATAAAATTATGCGGTTATTTTTTCTTTCCAATTTAGGAATTCAAATACGTAAAACTATATAAAAGAAAAATTAAAGTTTAATGAATTATATAATTACATGATTGAATGCTTACAAATCAAATTTATAAAACCCTAGTTGTTAAGGCTCACTTGGATAACAGATTCATTTTTAGTTTTCCTTAAAACTTTTGTTTGTCTAATCACTATTAGAATAATATGATGTTCACCTTTCTTAAAAGTAAGATTTGAATCCCTATTCAAATTCCAAAAGTAAAACAATATTTAAGAAACGGAAAGAAACAGTTTTAAACTGTTGATTTTTTTTAATTTATAAAAAATTCACATGCTTTAAAATTTCAGTCCCAAACAAAATTCAAATATTATTGGCTCAGTCTTTAATTTGTCCCAATCTGTTTACATTTTTTTGTTTTCTTTTTTTGGGAAATGATTGTGATATGTTTGAAATTGAGGATAGGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG
mRNA sequence
ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG
Coding sequence (CDS)
ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG
Protein sequence
MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES*
Homology
BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match:
A0A0A0KPE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1)
HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60
Query: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRP TPNFTIFQMLQQLDKFES
Sbjct: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115
BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match:
A0A5A7SM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00230 PE=4 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1 MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60
Query: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61 VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115
BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match:
A0A1S3C3T8 (uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=4 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1 MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60
Query: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61 VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115
BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match:
A0A6J1J9G4 (uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 7.3e-43
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22 MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81
Query: 61 VSREVKVQAE--ARPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 116
VSREVK AE R VRKRHH TLSRPD LM GMSP P+T NFTIFQMLQQLDKFES
Sbjct: 82 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140
BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match:
A0A6J1FRX2 (uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC111447618 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 7.3e-43
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22 MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81
Query: 61 VSREVKVQAE--ARPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 116
VSREVK AE R VRKRHH TLSRPD LM GMSP P+T NFTIFQMLQQLDKFES
Sbjct: 82 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140
BLAST of Chy10G172760 vs. NCBI nr
Match:
XP_004140415.1 (uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical protein Csa_004700 [Cucumis sativus])
HSP 1 Score: 232 bits (592), Expect = 6.90e-77
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60
Query: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 115
VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRP TPNFTIFQMLQQLDKFES
Sbjct: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115
BLAST of Chy10G172760 vs. NCBI nr
Match:
XP_008456876.1 (PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 uncharacterized protein E6C27_scaffold452G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 226 bits (577), Expect = 1.34e-74
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1 MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60
Query: 61 VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 115
VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61 VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115
BLAST of Chy10G172760 vs. NCBI nr
Match:
XP_022942644.1 (uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 uncharacterized protein LOC111482932 [Cucurbita maxima] >KAG6599867.1 hypothetical protein SDJN03_05100, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 180 bits (456), Expect = 8.45e-56
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22 MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81
Query: 61 VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
VSREVK AE R VRKRHH TLSRPD LM GMSP P+T NFTIFQMLQQLDKFES
Sbjct: 82 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140
BLAST of Chy10G172760 vs. NCBI nr
Match:
KAG7030551.1 (hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 180 bits (456), Expect = 2.93e-55
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 61 MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 120
Query: 61 VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
VSREVK AE R VRKRHH TLSRPD LM GMSP P+T NFTIFQMLQQLDKFES
Sbjct: 121 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 179
BLAST of Chy10G172760 vs. NCBI nr
Match:
XP_023551192.1 (uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 178 bits (451), Expect = 4.88e-55
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = 0
Query: 1 MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKR E
Sbjct: 22 MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRAE 81
Query: 61 VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
VSREVK AE R VRKRHH TLSRPD LM GMSP P+T NFTIFQMLQQLDKFES
Sbjct: 82 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140
BLAST of Chy10G172760 vs. TAIR 10
Match:
AT2G01913.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 53.9 bits (128), Expect = 9.9e-08
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0
Query: 11 MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKV--- 70
+EF P++HP+EP++ED PV CP+P S+SL+ + +++ W K S E V
Sbjct: 29 VEFCPVEHPIEPEEEDRPVKCPVPISSSLIHKPK----EKSKPGWVKHRASSYETPVYPP 88
Query: 71 -QAEARPVRKRHHR----------TLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
+ R VRKRH+ T S D N T +++LQQ+ +FES
Sbjct: 89 PRHHVRNVRKRHNSFDVEGNNNFFTRSHDDD-----ETTSRRSNVTFYRVLQQVQEFES 138
BLAST of Chy10G172760 vs. TAIR 10
Match:
AT2G35585.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 41.6 bits (96), Expect = 5.1e-04
Identity = 30/105 (28.57%), Postives = 52/105 (49.52%), Query Frame = 0
Query: 12 EFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVS-------RE 71
EF P+ HP+EP D D P+ CP+P S+L++G + + + S R+R++++ E
Sbjct: 53 EFKPVDHPMEPLDNDQPIQCPLP-EPSILNDGRLWKERVSASSMRRRSDLAIVQDGMDEE 112
Query: 72 VKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQ 110
V + P R T +RP + P S P + +L++
Sbjct: 113 SDVSVTSIPSRTSQCNT-NRP------ILPSLSAPEHDLLNLLEE 149
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KPE8 | 1.2e-58 | 98.26 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1 | [more] |
| A0A5A7SM67 | 6.8e-57 | 93.91 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A1S3C3T8 | 6.8e-57 | 93.91 | uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=... | [more] |
| A0A6J1J9G4 | 7.3e-43 | 78.33 | uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932... | [more] |
| A0A6J1FRX2 | 7.3e-43 | 78.33 | uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC1114476... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004140415.1 | 6.90e-77 | 98.26 | uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical ... | [more] |
| XP_008456876.1 | 1.34e-74 | 93.91 | PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 unc... | [more] |
| XP_022942644.1 | 8.45e-56 | 78.33 | uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 unchar... | [more] |
| KAG7030551.1 | 2.93e-55 | 78.33 | hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_023551192.1 | 4.88e-55 | 77.50 | uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G01913.1 | 9.9e-08 | 32.77 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |
| AT2G35585.1 | 5.1e-04 | 28.57 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
