CcUC10G207070 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G207070
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUbiquitin thioesterase OTU1
LocationCicolChr10: 33930544 .. 33936488 (-)
RNA-Seq ExpressionCcUC10G207070
SyntenyCcUC10G207070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTATGGCGGAGAAGCCTCAAAATGGTGAGAAACCTCAACCAGTTTATTCTCTATCCTCATGATTCCTATTCCTATTCTCTTCCTTTATCTGTTTTTCTTCGCTATTTCTTCCTTTTTGAGTTTATTGTCTGTTTGTTCATCGTTTTAGTGGCAATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCTCATCTTCGCCTGTAAGTTCAATTTCTCCTTCGAACTCTGTTACTCCATCTTTCCGTTTCTCTATGAATCGCGGTCACCCACTCTTTGCTAAAATTGGATCCGTGTTGTAAGTTCATTCATTCTCTTTTAGTTGGGAGGAGAGTCTTTGAACTCCGTTGTTCTTCCAACTTCATAAATTGCTATTCTTAGGGGCAGTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAAAAAGTTACTGGAGACGGACGCTGCCTGTTCCGTGCACTTGTAACCTTCCTTCCCCTATTCAATCTGTTCTTCACTCTTAAATTTATTTTGTGATTGACTTTGTTTATTCTAATTACCGTTCCAAATTATCTAATTGTGGATTTATGCTTTTGATAGTCACTTCGTCTTCAGTTATATGTTTCTAAAAATCAGATTTGTTTGTTAGTAGTTAATTTATTTTGTGATATATTTCTTAACATTATGACTAAATTTTAAATGTTTTTGCTTCTGAAATTCAACCCAACTTTTATGAAGTGGAAGACAATAAATTGTTGAAACAAGGACAATCTTTAGAAACAGAAGATTAAGGGCAGTCATTTCATTCTCAAGTAGTGTCATAGTTTTCGTGTCCCCACTTAGTGGCTGCAGCAAGGAAGTGGAACCAAATTTTCTCGCCTATTAAACTAACTTCCTCTTAATAAAATCAGGCTAAAGGAATGGCTTTCAACAGGGGGATTCCTCTTCGTCCATTCGAGGAGAAAAATGATGCAGGTAAGCTTTGATATATCATCTCTAATAGGCACAATGCCAGTGTAGACATATATTATCCTGGATAATTGAGTGTGGAACATAATGTTTGCGCTGATTGAACAAGTAGGAAGATTGTGCAAATGTTCTGTTTACCATAACAACCAAATGTTTTTGGAAGGTGAACTAGACGTCTACTATGTACACCTTGAGCACTAGAGCTAGAATCTCGGGAAAAGAAGAAACAATAACATCAAATCTAGAGATAAAAGGATTTTTTTTCTTGTCTTGAATTAGTGTTCATTTTGACGCTCCCTTTGACACTTGGTTTGCCTTGAAGAGTGAGTTGTGCTTGTAGCACAAGAATATGCTAACTTTATCTGTCACACAACAAAAAATGTATGTGACCATGGGCATCTCTCTTCTTTTTAATAGTTTTCAAGTGTTCATGATCATATGACTATACCATTCTGGAGATGGAGTTTGAATGACCTAAAGTTCAAATTCTATCCTATGATTGTACTATGGATGTCCTTTTATCCCTCGAGTTCCTCATTGTGCTTACTTTACAACCAAGGGCCTTCTTTTGTTCATACTTACGTGGATCTTGTTCAAGCTTCTGAACACTTTTTAATTATGTGGCTTGTGAAGCGATCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCAAAAAAAAAAGGTCAAGCGAAAAAATGATGTACTAACTAAATTTGTAGCAATTGGTTTGTGCTATGTTATTTCATAAATCATTGATTAGATTAAGCATGCAGATGATTTACGCATGGCTGTGAAAGAAGTCATTTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGCAGCCCTCATTGCTATTACTGTTGAGGAGCCATTAGAACGGTTAGTTTGTTTCCCCTTTTACTTTTTCATTCTTTCTGTTCATGTGAAGTTATTCTTTTAGATTTTAGTGGTCTTTGCTTGCGGTCTGATAATGAGAACTTCCAAAAGTAAATTTCAGCTACTGCCAACGTATTCGTACACCTGACTTCTGGGGAGGAGAGTCAGAGCTATTGGTTAGTTCTATTCCTTCTATTCCTCTAAGGCATCTTCACAAGCTATACTAAAAAATTTTATTTATTTATTGTGCATGTACGCGTATGTGTAAAGCCACCCTTTGTTAACATCACGTAATGAATCACGATCTGTATTAATCTCCATCAGGTATTGTCAAAGCTCTGCAAGCAACCTATCATTGTCTACATACCAGAGCATGAGGTATACTTTTCTCCTCTAAGATACCTAAATGGGCCAATTCAATGACCTTAAAAGTGTTGGTTTGTTGACTGAGGTCGAGTATATCTTCTGACAGTCTGACCTCAGAGAAAGAACAAGATTAGGTGGTGTTACCCCTTTTTAAGTTCAACTTAACAAATTTACTTAGTCTCACTTGATAACGATTTCATTTTTAGTTTTCTATTTTTGAAATTTATGCTTGTTTGTTTCCAATTTTTGTTCCATGGCTTTCACTTTAGTTTAAAGAAACACTTGAATTCTTAGTCAAACTCTAAAACAAAAACTACTCTTTTTAGGTCCCATTTGGTAATCTTTTGATTTTTGAAAATTGGGCTTGTTTTACACAATTTTTTGATCATGTTTTTCAATTTCGATGTAAACATATAAATCCTTAGTCACTACTTCTTTTAGTTTTCAAAATTGGCTTGAATTTTGAAAACACTTCTAAAATGCAAACAACAAAACACAAAAATCAATATATGAAAGTGGTGATTATAGCCTTAATTTTCAAAAAACAAAATGGTTACTAAAGTGGGCCTTGGTGTTTAGTCCTTGGCTTGGGGTTTTAAAAATATTGGTAGAAAGTGGACAGTAAAACAAAGGAATTTACAAGTGAAAGTAGTGTTTATAGTTTAATGTTTAAGAACCAAAATGTATAAACCAAATGATTACCAAACAAAACTTTAGTCAAATAAACATGTTGAATTGACTCCCATTTACTTTATTTTGGTTTTTCTACATGATTTGCAGCACAAAATGGGTTGTCGGGGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGAAAGGAAAACCCAAGAAACCTGTGAGGTTGCTTTACAACGGTAGGAACCACTACGATCTACTTGTTTGAGAATCTTATTTTTAAGGCATCCCAACTTGTTGTGTTGGCATCATACAGTATTAAATTTACCTTCATCTGTTAGCATAAATTTTTGGGTCAATCGGCGATTTAAAATGTTATCTGAACATAAGGAAATAAATTGAGGCATGCTTGACAGGGATTGGTATTGCAATTAACACTTCAACAATAGTAGGAGAAGCCCAATAACACAACAACCGAATTTTTGTAGAAGCTGTTGCATTGTGAATGTGAGTTCCAAACTTTGGTTGTTTAAAAAAGTGTTCTTATGTGTATTTCATGAATATGAAAGTGATGAATTGATGAGACTCTGGAGAGACAATACAAAGGTTGGTTTTTTGTTGGAATTTCTGAGTTTTTTTTTTTATTTTTTATTTTTTTATTTTTATTTAGAATAGAGGGTGAACTTAGTGTCTCCACCGAAAGAAAAGGGTGAATTTAGTGAAAATTGAACAAAGGATAAAACTTGTAATGTTTGATAAGTTTATGGTATAATGATTTTTTTTTTCTTCTCTAAATTAAATAAAGTAATAGAAATGTTTAAAGATGTACCAAGTACTGTCCTTAAAAGAAAATAAAAAAATAAAAACTTGATTTGGACTTTCAATTAAGTTTATATCATAATGTTGTTCATTAATTAAGCTAGTGAATTTTAAATTATTTGATGTGTTTTCGAAGTAATGAATCTCTAAACTTTAAAAAAAATGCCTAATGACCAATTTTTGAACTCTGTGTTTTGTATTTTATGAATTCATAAAATATTAAAAACAAAAATTAAACATCTATTCAAAACATGAAAATTAAAAGATCTAAAGGACAAAAAATTGAATATTAAAAAACAATTTTAAGGATCAAATAGAGATAAACATAAAAGTGTACAAATTAAGCTTGTGATTTAACCACATTGGAGGAAAATTGTTTTTATCCATTTTGTGCCTACAATATTTTTCCATCCATGTATTGTAGTTTTTTTTTCATTGAATTAAATCAAAATCAAATTTTAATTAATATGATTGAACCAAGATTGAACCGAACAGGTCCAAAGAAAACGATTTGGTCCGTTATTTGCATGGCGTTGACATGCTTCGCTCTATTCTACTTGAGAAACAAACAACCAAAATGAAAGAAGAGTCCGTTAGTCTTTCTATCAAGCCACAATACATATTAGGAGAACATTGAAATTAAAAAATAATAATTGGCGAGAAATAACACTTTTGAAATTATTAGGGTTGGTCGGGTGATATTTCAGGTTTTGTTTTATGTTTTTAGATTTAGTGGATTCAATAAATATGTATTTGGTAGATAACCCAAATTATTTTCTTAAAATTTGTTTTCAAGTTTTGTGATCCAAATGATACAATTCTAAAAATAAAATATAAATTTTCATTGTATATCTATTTTAAAATTTAAAATGTATAATTCTATTGGATAAAAATTAAAACACTTAGAAATGCAATACGTCATTTTATAAATTTAATTGATTTTTTTTAAAAAATATAATTTGTACTATTTAATGTTTTAACATACATCATATTCATAAATAACTTAATAATAGTTTATAGTCAACTAAATATTAGTGGGTAACTACAATTAGTTTTATGATTTATAAATATATATTAAACACATTTTAAACAATTGTTTAAATTATAATCAAAATTTTTAATCTACTACCAAACAATTGTCTGAAAACATGAAATACAACTATGTGTTTCCTTGAACCCATTGTTTTAAATTTATGTTTTCAAATTTTCTACCAAAACATGTCCTTAGTTTTTTGGCAGTTGTGTTTTATTTTATATATATATATATATATATATATATATATATATATATATATATAAACTAGGTTTGCTATTAAACATAACAAATTGGATCAATTTATTTTCAAATATAGCAAAATGTTCCTGTCTATCGTCGATATACAATGAAAAATGATATACAGTGACATTTTACTATATTTAAAAATATTTTCAACCGTTCTAACAAATTATATAATTTACCTAGAGAAGGTAAATAATTTGATGTTATTACTATAATCTCTATTTTTCTTTTTAAAAAAAATTTAATTATATGACAGACTTCCATAGATTAAAAAAATTATTGAAAAATATAAAAGATCACTAGTATTAATATATGATTAAAAAAAATAATAATAATAATATAAAATGTAAACCATTTTACCTACAAATTTCCGTAGCTGTTCGCGCCACCCGTACAAATTTCCCGCCCTTTTTTCCAATTGTTTTTTGAATGGGCATTATTAATATTCTTCCAACCCAATTAACCCGCCACAATCCCCAGCTGTTCGCGCCAGTCGGCTCCTTTCCCTCCCTCCGCTTCAGATCTCCCCGCCCACGTTTTGCCGTCGCATTACCGTCCCTTCAAAGTTGCCTCACCGGTGCCCGCCTCGATGTCTACGTTCTCACACCCTCTTCCCTCTTGCTTCCTACCTTGTTGCGGCTGCACTACTTCGACTTCGAGCTTCGTCCTCTCTTTGATCTCAGGTACACTAATCAATCCCTTTCCTGTCTTATAAGTTTCGGACGTTGATGATGTTGTATGATTATTTTCCCGATGAGATTCGAACAGAGTGAATCGATTGGGCTACTCTTCTCATAATCGAAACCCCAATCTATCTTCCATTTGA

mRNA sequence

ATGGATATTATGGCGGAGAAGCCTCAAAATGTGGCAATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCTCATCTTCGCCTGTAAGTTCAATTTCTCCTTCGAACTCTGTTACTCCATCTTTCCGTTTCTCTATGAATCGCGGTCACCCACTCTTTGCTAAAATTGGATCCGTGTTGGGCAGTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAAAAAGTTACTGGAGACGGACGCTGCCTGTTCCGTGCACTTGCTAAAGGAATGGCTTTCAACAGGGGGATTCCTCTTCGTCCATTCGAGGAGAAAAATGATGCAGATGATTTACGCATGGCTGTGAAAGAAGTCATTTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGCAGCCCTCATTGCTATTACTGTTGAGGAGCCATTAGAACGCTACTGCCAACGTATTCGTACACCTGACTTCTGGGGAGGAGAGTCAGAGCTATTGGTATTGTCAAAGCTCTGCAAGCAACCTATCATTGTCTACATACCAGAGCATGAGCACAAAATGGGTTGTCGGGGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGAAAGGAAAACCCAAGAAACCTGTGAGATCTCCCCGCCCACGTTTTGCCGTCGCATTACCGTCCCTTCAAAGTTGCCTCACCGGTGCCCGCCTCGATGTCTACGTTCTCACACCCTCTTCCCTCTTGCTTCCTACCTTGTTGCGGCTGCACTACTTCGACTTCGAGCTTCGTCCTCTCTTTGATCTCAGAGTGAATCGATTGGGCTACTCTTCTCATAATCGAAACCCCAATCTATCTTCCATTTGA

Coding sequence (CDS)

ATGGATATTATGGCGGAGAAGCCTCAAAATGTGGCAATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCTCATCTTCGCCTGTAAGTTCAATTTCTCCTTCGAACTCTGTTACTCCATCTTTCCGTTTCTCTATGAATCGCGGTCACCCACTCTTTGCTAAAATTGGATCCGTGTTGGGCAGTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAAAAAGTTACTGGAGACGGACGCTGCCTGTTCCGTGCACTTGCTAAAGGAATGGCTTTCAACAGGGGGATTCCTCTTCGTCCATTCGAGGAGAAAAATGATGCAGATGATTTACGCATGGCTGTGAAAGAAGTCATTTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGCAGCCCTCATTGCTATTACTGTTGAGGAGCCATTAGAACGCTACTGCCAACGTATTCGTACACCTGACTTCTGGGGAGGAGAGTCAGAGCTATTGGTATTGTCAAAGCTCTGCAAGCAACCTATCATTGTCTACATACCAGAGCATGAGCACAAAATGGGTTGTCGGGGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGAAAGGAAAACCCAAGAAACCTGTGAGATCTCCCCGCCCACGTTTTGCCGTCGCATTACCGTCCCTTCAAAGTTGCCTCACCGGTGCCCGCCTCGATGTCTACGTTCTCACACCCTCTTCCCTCTTGCTTCCTACCTTGTTGCGGCTGCACTACTTCGACTTCGAGCTTCGTCCTCTCTTTGATCTCAGAGTGAATCGATTGGGCTACTCTTCTCATAATCGAAACCCCAATCTATCTTCCATTTGA

Protein sequence

MDIMAEKPQNVAILEQLRLGIARFELSSSPVSSISPSNSVTPSFRFSMNRGHPLFAKIGSVLGSESPALRKAEHYKVQKVTGDGRCLFRALAKGMAFNRGIPLRPFEEKNDADDLRMAVKEVICDNGKERRQYEAALIAITVEEPLERYCQRIRTPDFWGGESELLVLSKLCKQPIIVYIPEHEHKMGCRGSSFIPIAEYGAEFKKGKPKKPVRSPRPRFAVALPSLQSCLTGARLDVYVLTPSSLLLPTLLRLHYFDFELRPLFDLRVNRLGYSSHNRNPNLSSI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903455.14.2e-11094.39OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 isoform X1 [Benincasa ... [more]
XP_038903456.11.8e-10893.93OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 isoform X2 [Benincasa ... [more]
XP_008442470.18.7e-10892.52PREDICTED: OTU domain-containing protein At3g57810 [Cucumis melo] >KAA0044146.1 ... [more]
XP_022983319.11.9e-10792.06OTU domain-containing protein At3g57810 [Cucurbita maxima][more]
XP_004137738.12.5e-10792.52OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 isoform X1 [Cucumis sa... [more]
Match NameE-valueIdentityDescription
Q8GYW02.0e-6261.97OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thalian... [more]
Q8LBZ42.2e-1334.31OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thalian... [more]
P228563.4e-0629.41Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus OX=10490 GN=L96 P... [more]
Match NameE-valueIdentityDescription
A0A5D3DN034.2e-10892.52Ubiquitin thioesterase OTU1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3B5R54.2e-10892.52Ubiquitin thioesterase OTU1 OS=Cucumis melo OX=3656 GN=LOC103486327 PE=4 SV=1[more]
A0A6J1J7059.4e-10892.06Ubiquitin thioesterase OTU1 OS=Cucurbita maxima OX=3661 GN=LOC111481933 PE=4 SV=... [more]
A0A0A0LCX51.2e-10792.52Ubiquitin thioesterase OTU1 OS=Cucumis sativus OX=3659 GN=Csa_3G732560 PE=4 SV=1[more]
A0A6J1F6U02.7e-10791.59Ubiquitin thioesterase OTU1 OS=Cucurbita moschata OX=3662 GN=LOC111441401 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G38025.11.4e-6361.97Cysteine proteinases superfamily protein [more]
AT3G57810.11.6e-1434.31Cysteine proteinases superfamily protein [more]
AT3G57810.21.6e-1434.31Cysteine proteinases superfamily protein [more]
AT3G57810.31.6e-1434.31Cysteine proteinases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003323OTU domainPFAMPF02338OTUcoord: 81..203
e-value: 2.4E-12
score: 47.4
IPR003323OTU domainPROSITEPS50802OTUcoord: 75..200
score: 13.254248
NoneNo IPR availableGENE3D3.90.70.80coord: 55..215
e-value: 3.1E-28
score: 100.8
NoneNo IPR availablePANTHERPTHR13312:SF3OTU-LIKE CYSTEINE PROTEASE FAMILY PROTEIN, EXPRESSEDcoord: 5..214
IPR039138Ubiquitin thioesterase OTU1/2/3PANTHERPTHR13312HIV-INDUCED PROTEIN-7-LIKE PROTEASEcoord: 5..214
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 73..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G207070.1CcUC10G207070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0016579 protein deubiquitination
biological_process GO:0030433 ubiquitin-dependent ERAD pathway
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0004843 thiol-dependent deubiquitinase
molecular_function GO:0101005 deubiquitinase activity