
CcUC10G207040 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTAAATCTTATGGGGGTCCCAACTAATATAAAAATGTTAAATCTTTTAAATGTTCATGGGCAATAATTCCTTTGATCAGAGGGTAATTAATACAAAGAGTATCCACTGCCTCTCTCTTTCTAACCAGTAAAAAGAAAATAAAGAAAAGAAAAGGAAATCAATGTCAATACCAATTCCAATTCCGATGGGGAAATGAAGGAGAAGAAGAATAAAAAGCCACGAGGGGCATGACGCTTTTGACCTGTCCGCTGGCCCAATCCCCATTTTTATTTCCTACCATTCCAACTAGTCTGCCCTCAAGACTCTCAACACAGAGTGGACAACAAAAAAGCTAAACACAAACTCCTGTTTTTCCTTTTCTGCTGGCCGCTTGCTTTAGAGCTCTTTGTTTCTGTTTCTTTAGGGTATTTTGAAAGCTCAACTGGAATCAAGATCCTCTCTTTTTACTTCTTTTGATGGGTTCCTCGGATCGTTTATTTTGTAGACAGCGAACTCTTCACGAAATTGTTGGCGGCGGTATTGGTATGTCAAGATCTTTTGATTTCTGGGTTTTTTTTTTTTTTTTTTTTTGTGCGTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTGTGCGTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTGTGCGTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTGTGCGTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTGTGCGTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTTTTTTTCCTTTGTTTCTCTTGATGGATCGATCCTCTTTAAATTTCTATTGGGTTGCTCTGTTTCGGTTCTCTGTTGAATTTCGAAGCAGTGGTTGTTTTCTTCTTTTCTGCATCGCTAATGCAATGTATTTTTGGATTGATGAAAGTTTTCTGTGGATTCTGCTTTTCACTGCAGCTGTTAGAGTTCTAGGATCCATGAATTCCCTTGCTATAAAGTAACTAAGGATTGGATTTAACTCTTAGTTTCTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTGTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAGATTGCCTCTTGACTTCTCTGTTATAAGACATCTCTTCAATTTGAATATCATTGAAGAATGGTAAACTGATATATAAGTTCCAAAATGCATGATCTTTAATACATAAGGGAGCATTTCCCTATTGAATTTGACAATTGTCTTGAATGATGGTTACGTCCTGATTCAAATTCTTTAGTTTTTCAACCACGTGATTTGTTAATTTGACTTTGCTTTCTTTTACGTTTGATAAACATCTTGGGATTTTACTTCCATGAGTTCCATCAGTATTTCATGTCCATGTGCGCTTTTGAGTTCCAGTCACTTAGTGTTAGTTGTCTTAGATGTATGAAATATGTAAATGCATTTGGAAAAGATGATGGACATGAGTGAGACACTATATATTGACAAATAAGCTAGAGATAAAACGATTCGGTAGTTTTCAAGCATTCTAAAATTTATCAATGCAGAATGTAGCATGTAGTTTTTGGTTAACTGCCGTCTTCTGAGTTATGAACTTAGCTTCCTGGCAAAGGATTGATGCATTACAGAAGTGAAAATTGTCATTCTGAAATTTCTCTATGTATTTCCTAGCTTCCTTATTTCCAGGCTAATAAAGTCTAGCTTAACTTCTAAGTACTTGGATTAAGGTTACTTCTGAATCTGCTACCTTTCTTCCTGAACAGACCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACGTTGGGTTACACCAGTAAGTTTCAATCTTAAGTTTCCACAATTCTTTGTGTAATCTCAATCCTTGTTGATAAAAAATGGACGATGGTCGATCAATTTCATGGATATTTTTTCTCTCAACGACAGGCCTTTTACTCGTGCTTACGATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCCTATTGATGTACAGAAAATTGCATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTTACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCAGCAATCTCTTCTGTTCATGGCTTTCTCTCCTCTTTCTTCTTATTTCATTTTGGATGTGTTTATTGCGTTCTTTCAAGTTTCAACCCACTTTGGCTAATGGCTAGCACCTCAGCAGTGACAGAATCTTGAGGGAAATGATTGTATTTTGTTCATATAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAAATGTATTTAGAAACGGCATATTACGAATTTTGGA ATGAAGCTCAACTGGAATCAAGATCCTCTCTTTTTACTTCTTTTGATGGGTTCCTCGGATCGTTTATTTTGTAGACAGCGAACTCTTCACGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTGTGGGCCAAATCTGCTTCCATTCTCAATAGGTTACTTCTGAATCTGCTACCTTTCTTCCTGAACAGACCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACGTTGGGTTACACCAGCCTTTTACTCGTGCTTACGATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCCTATTGATGTACAGAAAATTGCATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTTACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGATCAGCAATCTCTTCTGTTCATGGCTTTCTCTCCTCTTTCTTCTTATTTCATTTTGGATGTGTTTATTGCGTTCTTTCAAGTTTCAACCCACTTTGGCTAATGGCTAGCACCTCAGCAGTGACAGAATCTTGAGGGAAATGATTGTATTTTGTTCATATAACTTTGTTTTCATTTTCTCTAATTCCTGCTAGAGAAATGTATTTAGAAACGGCATATTACGAATTTTGGA ATGAAGCTCAACTGGAATCAAGATCCTCTCTTTTTACTTCTTTTGATGGGTTCCTCGGATCGTTTATTTTGTAGACAGCGAACTCTTCACGAAATTGTTGGCGGCGGTATTGTTGCAGATGTAATTCTTTGGAGGCGGAAGAATCTAACTGTGGGGATATTGTTAATAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATCTTTCTGTGGGCCAAATCTGCTTCCATTCTCAATAGGTTACTTCTGAATCTGCTACCTTTCTTCCTGAACAGACCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGCTGCATCTTTCATTCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCTTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATCTTCTCACGTTGGGTTACACCAGCCTTTTACTCGTGCTTACGATCCCCGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGTCCTATTGATGTACAGAAAATTGCATCAGTTTTATGTGAAATTGGATGAGAAGCGAGTTCTTACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA MKLNWNQDPLFLLLLMGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRLLLNLLPFFLNRPAPPLPELHLSEDMVNEAASFIRSRVNTLLSVSQDIAMGKDPRLFFKVAACLWLISVISGLTDLLTLGYTSLLLVLTIPALYEKYEDYVDRHVLLMYRKLHQFYVKLDEKRVLTYQQWILEKEKLS Homology
BLAST of CcUC10G207040 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida]) HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103 Identity = 206/221 (93.21%), Postives = 209/221 (94.57%), Query Frame = 0
BLAST of CcUC10G207040 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 372.1 bits (954), Expect = 3.6e-99 Identity = 198/221 (89.59%), Postives = 206/221 (93.21%), Query Frame = 0
BLAST of CcUC10G207040 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 371.3 bits (952), Expect = 6.1e-99 Identity = 198/221 (89.59%), Postives = 205/221 (92.76%), Query Frame = 0
BLAST of CcUC10G207040 vs. NCBI nr
Match: XP_022145597.1 (reticulon-like protein B12 [Momordica charantia] >XP_022145598.1 reticulon-like protein B12 [Momordica charantia]) HSP 1 Score: 369.0 bits (946), Expect = 3.0e-98 Identity = 196/221 (88.69%), Postives = 205/221 (92.76%), Query Frame = 0
BLAST of CcUC10G207040 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 1.5e-97 Identity = 195/221 (88.24%), Postives = 204/221 (92.31%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.8e-51 Identity = 107/204 (52.45%), Postives = 149/204 (73.04%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.0e-37 Identity = 93/218 (42.66%), Postives = 137/218 (62.84%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32 Identity = 74/176 (42.05%), Postives = 112/176 (63.64%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29 Identity = 73/200 (36.50%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.6e-28 Identity = 70/200 (35.00%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99 Identity = 198/221 (89.59%), Postives = 206/221 (93.21%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 3.0e-99 Identity = 198/221 (89.59%), Postives = 205/221 (92.76%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 3.0e-99 Identity = 198/221 (89.59%), Postives = 205/221 (92.76%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy TrEMBL
Match: A0A6J1CWE2 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111015006 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98 Identity = 196/221 (88.69%), Postives = 205/221 (92.76%), Query Frame = 0
BLAST of CcUC10G207040 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 7.3e-98 Identity = 195/221 (88.24%), Postives = 204/221 (92.31%), Query Frame = 0
BLAST of CcUC10G207040 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein ) HSP 1 Score: 203.0 bits (515), Expect = 2.7e-52 Identity = 107/204 (52.45%), Postives = 149/204 (73.04%), Query Frame = 0
BLAST of CcUC10G207040 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein ) HSP 1 Score: 155.2 bits (391), Expect = 6.4e-38 Identity = 93/218 (42.66%), Postives = 137/218 (62.84%), Query Frame = 0
BLAST of CcUC10G207040 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein ) HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36 Identity = 93/219 (42.47%), Postives = 137/219 (62.56%), Query Frame = 0
BLAST of CcUC10G207040 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein ) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33 Identity = 94/241 (39.00%), Postives = 138/241 (57.26%), Query Frame = 0
BLAST of CcUC10G207040 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein ) HSP 1 Score: 139.0 bits (349), Expect = 4.8e-33 Identity = 74/176 (42.05%), Postives = 112/176 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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