CcUC10G201630 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G201630
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	WAT1-related protein
Location	CicolChr10: 28782404 .. 28782921 (-)
RNA-Seq Expression	CcUC10G201630
Synteny	CcUC10G201630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAGTTTGAGTTTTTTTTTTTTTTTTTCTTTTTAGAATTGAGGTGGGCGAAGAAAAATATTTAAAAGTACTAAAAAAAGTATTAGTAGAGTGACTTTTTTCACTAGTATAAAACTGTGTTATAATGTCAATTGAAAATCGATATTATAGAAATACAATGTTAGTTGGTGACCGACATCAAAGAAGATAATCCAATAAGTAATTGAGCAGCATACTGAATTTAAAATCAAACATTATCCAAAGTGTAATTGTTAAAAGCATTTGTTATAGGAGTAGTTTTGGAACACAACAATCTTATATTTATGTTTGATTTTTCAGGATAACTGGAGTAGTGATGATTGTAATAGGGTTGTACTCTGTTTTGTGGGGAAAGTGTAAAGAAAGCATAGAGAGATTAGAAGATGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAGAGGCTTCAAGACACTAATCAGCCAAATTAA

mRNA sequence

ATGGTTGAGATAACTGGAGTAGTGATGATTGTAATAGGGTTGTACTCTGTTTTGTGGGGAAAGTGTAAAGAAAGCATAGAGAGATTAGAAGATGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAGAGGCTTCAAGACACTAATCAGCCAAATTAA

Coding sequence (CDS)

ATGGTTGAGATAACTGGAGTAGTGATGATTGTAATAGGGTTGTACTCTGTTTTGTGGGGAAAGTGTAAAGAAAGCATAGAGAGATTAGAAGATGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAGAGGCTTCAAGACACTAATCAGCCAAATTAA

Protein sequence

MVEITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIETIQKKRLQDTNQPN

Homology

[Close]

BLAST of CcUC10G201630 vs. NCBI nr
Match: XP_038903649.1 (WAT1-related protein At5g07050-like [Benincasa hispida])

HSP 1 Score: 72.4 bits (176), Expect = 1.7e-09
Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINE---GIETIQKK 59
           I G V+IVIGLYSVLWGK KES E+ E EEIV+L MK GDQLPVIN+    IETIQKK
Sbjct: 320 IIGAVLIVIGLYSVLWGKYKESKEK-EVEEIVQLPMKSGDQLPVINDQANNIETIQKK 376

[Close]

BLAST of CcUC10G201630 vs. NCBI nr
Match: XP_022152014.1 (WAT1-related protein At5g07050-like [Momordica charantia])

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 47/82 (57.32%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEG-IETIQKK---- 63
           I G V+IVIGLYSVLWGK KES E+ E  EIVE A+KGG+ LPVINE  IE IQKK    
Sbjct: 319 IIGAVLIVIGLYSVLWGKYKESKEKKEGGEIVE-AVKGGELLPVINEDIIEAIQKKQALA 378

Query: 64  -------------RLQDTNQPN 68
                        +LQ TNQPN
Sbjct: 379 INIPPMAGPNMENKLQTTNQPN 399

[Close]

BLAST of CcUC10G201630 vs. NCBI nr
Match: XP_038903713.1 (WAT1-related protein At5g07050-like isoform X1 [Benincasa hispida])

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIETIQKK 59
           I G V+IVIGLYSVLWGK +ES E+    EIVEL M+G DQLP+ NE IE IQKK
Sbjct: 317 IIGSVVIVIGLYSVLWGKYEESKEKEVIGEIVELPMEGEDQLPIRNEAIEAIQKK 371

[Close]

BLAST of CcUC10G201630 vs. NCBI nr
Match: XP_038903714.1 (WAT1-related protein At5g07050-like isoform X2 [Benincasa hispida])

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIETIQKK 59
           I G V+IVIGLYSVLWGK +ES E+    EIVEL M+G DQLP+ NE IE IQKK
Sbjct: 278 IIGSVVIVIGLYSVLWGKYEESKEKEVIGEIVELPMEGEDQLPIRNEAIEAIQKK 332

[Close]

BLAST of CcUC10G201630 vs. NCBI nr
Match: XP_004136769.2 (WAT1-related protein At5g07050 [Cucumis sativus] >KGN59418.1 hypothetical protein Csa_002694 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 7.0e-08
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIE 54
           I G V+IVIGLYSVLWGK KES E+  + +IVE AMKGGD+LP+ NEGIE
Sbjct: 317 IIGAVLIVIGLYSVLWGKYKESKEKESNGDIVE-AMKGGDELPITNEGIE 365

[Close]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL
Match: A0A6J1DES2 (WAT1-related protein OS=Momordica charantia OX=3673 GN=LOC111019829 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09
Identity = 47/82 (57.32%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEG-IETIQKK---- 63
           I G V+IVIGLYSVLWGK KES E+ E  EIVE A+KGG+ LPVINE  IE IQKK    
Sbjct: 319 IIGAVLIVIGLYSVLWGKYKESKEKKEGGEIVE-AVKGGELLPVINEDIIEAIQKKQALA 378

Query: 64  -------------RLQDTNQPN 68
                        +LQ TNQPN
Sbjct: 379 INIPPMAGPNMENKLQTTNQPN 399

[Close]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL
Match: A0A0A0LC92 (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_3G818270 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIE 54
           I G V+IVIGLYSVLWGK KES E+  + +IVE AMKGGD+LP+ NEGIE
Sbjct: 317 IIGAVLIVIGLYSVLWGKYKESKEKESNGDIVE-AMKGGDELPITNEGIE 365

[Close]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL
Match: A0A5D3DPD1 (WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006520 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIE 54
           I G V+IVIGLYSVLWGK KES E+  + +IVE AMKGGD+LP+ NEG E
Sbjct: 317 IIGAVLIVIGLYSVLWGKYKESKEKESNGDIVE-AMKGGDELPITNEGNE 365

[Close]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL
Match: E5GBP7 (WAT1-related protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIE 54
           I G V+IVIGLYSVLWGK KES E+  + +IVE AMKGGD+LP+ NEG E
Sbjct: 317 IIGAVLIVIGLYSVLWGKYKESKEKESNGDIVE-AMKGGDELPITNEGNE 365

[Close]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL
Match: A0A1S3B7I5 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103486873 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 4   ITGVVMIVIGLYSVLWGKCKESIERLEDEEIVELAMKGGDQLPVINEGIE 54
           I G V+IVIGLYSVLWGK KES E+  + +IVE AMKGGD+LP+ NEG E
Sbjct: 317 IIGAVLIVIGLYSVLWGKYKESKEKESNGDIVE-AMKGGDELPITNEGNE 365

The following BLAST results are available for this feature:

BLAST of CcUC10G201630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903649.1	1.7e-09	72.41	WAT1-related protein At5g07050-like [Benincasa hispida]	[more]
XP_022152014.1	4.9e-09	57.32	WAT1-related protein At5g07050-like [Momordica charantia]	[more]
XP_038903713.1	3.1e-08	67.27	WAT1-related protein At5g07050-like isoform X1 [Benincasa hispida]	[more]
XP_038903714.1	3.1e-08	67.27	WAT1-related protein At5g07050-like isoform X2 [Benincasa hispida]	[more]
XP_004136769.2	7.0e-08	70.00	WAT1-related protein At5g07050 [Cucumis sativus] >KGN59418.1 hypothetical protei...	[more]

BLAST of CcUC10G201630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G201630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DES2	2.3e-09	57.32	WAT1-related protein OS=Momordica charantia OX=3673 GN=LOC111019829 PE=3 SV=1	[more]
A0A0A0LC92	3.4e-08	70.00	WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_3G818270 PE=3 SV=1	[more]
A0A5D3DPD1	2.2e-07	68.00	WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352...	[more]
E5GBP7	2.2e-07	68.00	WAT1-related protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3B7I5	2.2e-07	68.00	WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103486873 PE=3 SV=1	[more]

BLAST of CcUC10G201630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G201630.1	CcUC10G201630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0022857	transmembrane transporter activity