CcUC10G200690 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G200690
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr10: 27681566 .. 27682783 (+)
RNA-Seq Expression	CcUC10G200690
Synteny	CcUC10G200690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCGGCTCTCTCCAGAACTCCAAGACGCCTGTTCCTCCCCTCTAGACTCCATTCTTTTCCACATTCAACTACTCCATCGCTTCAACCAAACTCCGATTCCCCTTTCCCTTCATTTCGTGCTGCTAAATCCGCCATTTTGTCTCAATCAGATCCCGAAAAGCTTGCCCAATCCTTTATCCAAGCTTCCAACCTTCCCGCCTTCCGCCGCTACCGCCCAATCTACCACCATTCCATCCGCAAACTCGCCCGTGCTCAACGCTTCGACCTCATCGATGGCATCATTCAATCCCACCACAAATCCCCCTCCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCTAGCGCCGGCATGGTCGATCAAGCGCTCCGCACTCTTGATCAGGTAATCCTTCACAAACCCTGCGATCTGTCAGAGAAATCGCTCTCTGCTGTTCTCTCTGTTTATCTCGACAATTCCATGCCCGAGAAGGTCCATGAGATGTTCAGATCCATTCCGGATAGGATTGGTGTTACTCCGACGGTGGTTTCCCACAATCTGGTATTGAAGGCTTTTGTTCAGCAAAACGATCTTCAATCGGCTCGGAATTGGATCGATGAGTTATACAAGGATGATGCTAAAGTCGTCCCTAACATTGACTCCTACAATATTTTGCTAGGAGCGTACTGGAACAATGAAGATCCAGTCGGATTTGATGGAATTGTCAAGGAAATTTCAAAGAGAGGTTTGGAATTCAATTTGGCTACTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGAGTGTGCTCGGGCCAAGAAAATGCTGGATGAGATGGTTTCAAAGGGTGTGAAACCAAATTCTCGTAGCTATGATGCAATCATCCATGGGTACTGCAATGTTGGGGATATTGAATCGGCTATGAAAGTTCTGAAGAGTATGCTGGAGGATGGCTATGTTTCTCCCACTTCCCGAAGCTATTATAGTTTGCTTCGAAGCATGGTTAAGGAGGGGGAGTTTGATTTGGCGTTGGAGACATGTAGAGAGATCATAAAGAGGAGATGGGTTCCTCCATTTGAGGCAATGGAGGTCCTGGTTCGTGGGTTGGTGGATATGTCGAGGGTTGAAGAGGCAAAAGAGGTTGTTGAGAAGATGAAGAAGAGGCTCAAAGGGCCTGCTGTGGATTCATGGGGAAAAATTGAAGCTGCTCTTTCTCTGTAG

mRNA sequence

ATGGCTGCGGCTCTCTCCAGAACTCCAAGACGCCTGTTCCTCCCCTCTAGACTCCATTCTTTTCCACATTCAACTACTCCATCGCTTCAACCAAACTCCGATTCCCCTTTCCCTTCATTTCGTGCTGCTAAATCCGCCATTTTGTCTCAATCAGATCCCGAAAAGCTTGCCCAATCCTTTATCCAAGCTTCCAACCTTCCCGCCTTCCGCCGCTACCGCCCAATCTACCACCATTCCATCCGCAAACTCGCCCGTGCTCAACGCTTCGACCTCATCGATGGCATCATTCAATCCCACCACAAATCCCCCTCCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCTAGCGCCGGCATGGTCGATCAAGCGCTCCGCACTCTTGATCAGGTAATCCTTCACAAACCCTGCGATCTGTCAGAGAAATCGCTCTCTGCTGTTCTCTCTGTTTATCTCGACAATTCCATGCCCGAGAAGGTCCATGAGATGTTCAGATCCATTCCGGATAGGATTGGTGTTACTCCGACGGTGGTTTCCCACAATCTGGTATTGAAGGCTTTTGTTCAGCAAAACGATCTTCAATCGGCTCGGAATTGGATCGATGAGTTATACAAGGATGATGCTAAAGTCGTCCCTAACATTGACTCCTACAATATTTTGCTAGGAGCGTACTGGAACAATGAAGATCCAGTCGGATTTGATGGAATTGTCAAGGAAATTTCAAAGAGAGGTTTGGAATTCAATTTGGCTACTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGAGTGTGCTCGGGCCAAGAAAATGCTGGATGAGATGGTTTCAAAGGGTGTGAAACCAAATTCTCGTAGCTATGATGCAATCATCCATGGGTACTGCAATGTTGGGGATATTGAATCGGCTATGAAAGTTCTGAAGAGTATGCTGGAGGATGGCTATGTTTCTCCCACTTCCCGAAGCTATTATAGTTTGCTTCGAAGCATGGTTAAGGAGGGGGAGTTTGATTTGGCGTTGGAGACATGTAGAGAGATCATAAAGAGGAGATGGGTTCCTCCATTTGAGGCAATGGAGGTCCTGGTTCGTGGGTTGGTGGATATGTCGAGGGTTGAAGAGGCAAAAGAGGTTGTTGAGAAGATGAAGAAGAGGCTCAAAGGGCCTGCTGTGGATTCATGGGGAAAAATTGAAGCTGCTCTTTCTCTGTAG

Coding sequence (CDS)

ATGGCTGCGGCTCTCTCCAGAACTCCAAGACGCCTGTTCCTCCCCTCTAGACTCCATTCTTTTCCACATTCAACTACTCCATCGCTTCAACCAAACTCCGATTCCCCTTTCCCTTCATTTCGTGCTGCTAAATCCGCCATTTTGTCTCAATCAGATCCCGAAAAGCTTGCCCAATCCTTTATCCAAGCTTCCAACCTTCCCGCCTTCCGCCGCTACCGCCCAATCTACCACCATTCCATCCGCAAACTCGCCCGTGCTCAACGCTTCGACCTCATCGATGGCATCATTCAATCCCACCACAAATCCCCCTCCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCTAGCGCCGGCATGGTCGATCAAGCGCTCCGCACTCTTGATCAGGTAATCCTTCACAAACCCTGCGATCTGTCAGAGAAATCGCTCTCTGCTGTTCTCTCTGTTTATCTCGACAATTCCATGCCCGAGAAGGTCCATGAGATGTTCAGATCCATTCCGGATAGGATTGGTGTTACTCCGACGGTGGTTTCCCACAATCTGGTATTGAAGGCTTTTGTTCAGCAAAACGATCTTCAATCGGCTCGGAATTGGATCGATGAGTTATACAAGGATGATGCTAAAGTCGTCCCTAACATTGACTCCTACAATATTTTGCTAGGAGCGTACTGGAACAATGAAGATCCAGTCGGATTTGATGGAATTGTCAAGGAAATTTCAAAGAGAGGTTTGGAATTCAATTTGGCTACTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGAGTGTGCTCGGGCCAAGAAAATGCTGGATGAGATGGTTTCAAAGGGTGTGAAACCAAATTCTCGTAGCTATGATGCAATCATCCATGGGTACTGCAATGTTGGGGATATTGAATCGGCTATGAAAGTTCTGAAGAGTATGCTGGAGGATGGCTATGTTTCTCCCACTTCCCGAAGCTATTATAGTTTGCTTCGAAGCATGGTTAAGGAGGGGGAGTTTGATTTGGCGTTGGAGACATGTAGAGAGATCATAAAGAGGAGATGGGTTCCTCCATTTGAGGCAATGGAGGTCCTGGTTCGTGGGTTGGTGGATATGTCGAGGGTTGAAGAGGCAAAAGAGGTTGTTGAGAAGATGAAGAAGAGGCTCAAAGGGCCTGCTGTGGATTCATGGGGAAAAATTGAAGCTGCTCTTTCTCTGTAG

Protein sequence

MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL

Homology

[Close]

BLAST of CcUC10G200690 vs. NCBI nr
Match: XP_038906046.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 743.8 bits (1919), Expect = 7.8e-211
Identity = 376/407 (92.38%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPS--LQPNSDSPFPSFRAAKSAILSQSDPEKLAQ 60
           MAAALSRTPRRLFLPSR HSF +STTP+  LQPNSDSPF SFRAAKSAILSQSDPEKLAQ
Sbjct: 1   MAAALSRTPRRLFLPSRFHSFTYSTTPTPPLQPNSDSPFASFRAAKSAILSQSDPEKLAQ 60

Query: 61  SFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLY 120
           SFIQAS LPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLY
Sbjct: 61  SFIQASKLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLY 120

Query: 121 SSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTP 180
           SSAGMVDQAL TLDQVILHKPCDLSEKSLSAVLSV+LDNSMPEKVHEMFRSIP++I VTP
Sbjct: 121 SSAGMVDQALHTLDQVILHKPCDLSEKSLSAVLSVFLDNSMPEKVHEMFRSIPEKISVTP 180

Query: 181 TVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDG 240
           TVVS+N V KAFVQQNDLQSARNWIDE+YKDDAKVVPNIDSYNILLGA+WNN D VGFDG
Sbjct: 181 TVVSYNQVSKAFVQQNDLQSARNWIDEMYKDDAKVVPNIDSYNILLGAHWNNGDLVGFDG 240

Query: 241 IVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYC 300
           IVKEISKRGL+FNLATYNYRILRLCKNKECARAKK++DEMVSKGVKPNS  YDAIIHGYC
Sbjct: 241 IVKEISKRGLDFNLATYNYRILRLCKNKECARAKKVMDEMVSKGVKPNSGCYDAIIHGYC 300

Query: 301 NVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPF 360
           NVGDIESAMK+LKSMLEDGY SP+SRSYYSL+RSMVKEGEFDLALETCREIIKRRWVPPF
Sbjct: 301 NVGDIESAMKILKSMLEDGYASPSSRSYYSLIRSMVKEGEFDLALETCREIIKRRWVPPF 360

Query: 361 EAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           EAME LVRGLVDMSR+EEAKEVVEKMKKRLKGPAVDSWGKIEAALSL
Sbjct: 361 EAMEGLVRGLVDMSRIEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 407

[Close]

BLAST of CcUC10G200690 vs. NCBI nr
Match: XP_022983789.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 696.4 bits (1796), Expect = 1.4e-196
Identity = 360/406 (88.67%), Postives = 381/406 (93.84%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSR-LHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQS 60
           MAAALSRT RRLFLPS+ L SF +STTP LQPNSDSPFPSFRAAKSAILSQSDP+KLAQS
Sbjct: 1   MAAALSRTARRLFLPSKLLPSFTYSTTPPLQPNSDSPFPSFRAAKSAILSQSDPDKLAQS 60

Query: 61  FIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYS 120
           FIQ S+LPAFRR+RPIYH+SIRKLARAQRFDLIDGIIQS  K PSAISEGFWIRLIMLYS
Sbjct: 61  FIQYSDLPAFRRHRPIYHYSIRKLARAQRFDLIDGIIQSQLKPPSAISEGFWIRLIMLYS 120

Query: 121 SAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPT 180
           S+GMVDQA+RTLDQVIL+KPCDLSEKSL AVLSVYL+NSMPEKVHEMFR+IP++IGVTPT
Sbjct: 121 SSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPT 180

Query: 181 VVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGI 240
           VVSHNL LKAFVQQNDL+ ARN IDELYKDDAKVVPNIDSYNILLGAYWN  D VGFDGI
Sbjct: 181 VVSHNLALKAFVQQNDLELARNLIDELYKDDAKVVPNIDSYNILLGAYWNKGDLVGFDGI 240

Query: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 300
           VKEISKRGLEFNLATYNYRILRLCKNKECARAKK+LDEMVSKGVKPNS SYDAII+GY N
Sbjct: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKLLDEMVSKGVKPNSSSYDAIIYGYGN 300

Query: 301 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 360
           VGDIE A KVLKSMLEDG+VS +SR YYSL+RSMVKEGEFDLALETCREIIKRRWVPPFE
Sbjct: 301 VGDIELATKVLKSMLEDGHVSLSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFE 360

Query: 361 AMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           AME LVRGLV +S+VEEAKEVVEKMKK LKGPAVDSWGKIEAALSL
Sbjct: 361 AMEGLVRGLVGISKVEEAKEVVEKMKKMLKGPAVDSWGKIEAALSL 406

[Close]

BLAST of CcUC10G200690 vs. NCBI nr
Match: XP_008443376.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Cucumis melo] >KAA0053787.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25614.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 685.6 bits (1768), Expect = 2.5e-193
Identity = 343/405 (84.69%), Postives = 370/405 (91.36%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSF 60
           MAAAL RTPRRLFL SRLHSF +STT  LQPNSDSPF SFRAAKSAILSQSDPEKLAQSF
Sbjct: 1   MAAALPRTPRRLFLISRLHSFAYSTTLPLQPNSDSPFSSFRAAKSAILSQSDPEKLAQSF 60

Query: 61  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 120
           IQAS+ P+FRRYRPIYH SIRKLARAQRFDLID IIQSH KSPSA SEGFWIRLIMLYSS
Sbjct: 61  IQASSFPSFRRYRPIYHQSIRKLARAQRFDLIDDIIQSHLKSPSATSEGFWIRLIMLYSS 120

Query: 121 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 180
            GMV QAL  LDQ ILHKPC+LSEKSL A+LSVYLDNSMPEKVHEMFRS P++IGVTPTV
Sbjct: 121 VGMVSQALHILDQAILHKPCNLSEKSLCAILSVYLDNSMPEKVHEMFRSTPEKIGVTPTV 180

Query: 181 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIV 240
           +SHNLVLKAFV+QNDL SARNWIDELYKDDAKV+PNIDSY ILLGAYW+N D VGFD I+
Sbjct: 181 ISHNLVLKAFVRQNDLPSARNWIDELYKDDAKVIPNIDSYTILLGAYWSNGDMVGFDEIM 240

Query: 241 KEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNV 300
           KEI  RGLEFN+ATYNYRI RLCKNKECARAKK+LDEM+SKGVKPNS SYD+IIHGYC+V
Sbjct: 241 KEILNRGLEFNIATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300

Query: 301 GDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEA 360
           GDIESAMK+LK MLEDG+VSPTSR Y+ L+RSMVKEGEFDLAL+TCR+++KRRWVPPFE 
Sbjct: 301 GDIESAMKILKGMLEDGHVSPTSRIYFRLIRSMVKEGEFDLALDTCRQMLKRRWVPPFET 360

Query: 361 MEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           ME LVRGLV MS+VEEAKEVVEKMKKRLKGPAVDSW KIEA L+L
Sbjct: 361 MEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEATLAL 405

[Close]

BLAST of CcUC10G200690 vs. NCBI nr
Match: XP_004136798.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis sativus] >KGN59539.1 hypothetical protein Csa_001938 [Cucumis sativus])

HSP 1 Score: 684.9 bits (1766), Expect = 4.3e-193
Identity = 345/405 (85.19%), Postives = 370/405 (91.36%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSF 60
           MAAAL RTPRRLFL SRLHSF +STTP LQP SDSPFPS RAAKSAILSQSDP+KLAQSF
Sbjct: 1   MAAALPRTPRRLFLISRLHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQSF 60

Query: 61  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 120
           IQAS LP+F RYRPIYH SIRKLARAQRFDLID IIQSHHKSPSA SEGFWIRLIMLYSS
Sbjct: 61  IQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSS 120

Query: 121 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 180
            GMV+QAL  LDQ ILHK C+LSEKSL A+LSV+LDNSMPEKVHEMFRSIP++IGVTPT 
Sbjct: 121 VGMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTA 180

Query: 181 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIV 240
           VSHNLVLKAFV+QNDL SARNWIDEL KDDAKV+PNIDS+ ILLGAYW+N D +GFD I 
Sbjct: 181 VSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIE 240

Query: 241 KEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNV 300
           KEISKRGLEFNLATYNYRI RLCKNKECARAKK+LDEM+SKGVKPNS SYD+IIHGYC+V
Sbjct: 241 KEISKRGLEFNLATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300

Query: 301 GDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEA 360
           GDIESAMK+LK +LEDG+VSPTSR YY L+RSMVKEGEF++ALETCRE IKRRWVPPFEA
Sbjct: 301 GDIESAMKILKGILEDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEA 360

Query: 361 MEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           ME LVRGLV MS+VEEAKEVVEKMKKRLKGPAVDSW KIEAAL L
Sbjct: 361 MEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEAALPL 405

[Close]

BLAST of CcUC10G200690 vs. NCBI nr
Match: XP_022983790.1 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 681.0 bits (1756), Expect = 6.2e-192
Identity = 355/406 (87.44%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSR-LHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQS 60
           MAAALSRT RRLFLPS+ L SF +STTP LQPNSDSPFPSFRAAKSAILSQSDP+KLAQS
Sbjct: 1   MAAALSRTARRLFLPSKLLPSFTYSTTPPLQPNSDSPFPSFRAAKSAILSQSDPDKLAQS 60

Query: 61  FIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYS 120
           FIQ S+LPAFRR+RPIYH+SIRKLARAQRFDLIDGIIQS  K PSAISEGFWIRLIMLYS
Sbjct: 61  FIQYSDLPAFRRHRPIYHYSIRKLARAQRFDLIDGIIQSQLKPPSAISEGFWIRLIMLYS 120

Query: 121 SAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPT 180
           S+GMVDQA+RTLDQVIL+KPCDLSEKSL AVLSVYL+NSMPEKVHEMFR+IP++IGVTPT
Sbjct: 121 SSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPT 180

Query: 181 VVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGI 240
           VVSHNL LKAFVQQNDL+ ARN IDELYKDDAKVVPNIDSYNILLGAYWN  D VGFDGI
Sbjct: 181 VVSHNLALKAFVQQNDLELARNLIDELYKDDAKVVPNIDSYNILLGAYWNKGDLVGFDGI 240

Query: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 300
           VKEISKRGLEFNLATYNYRILRLCKNKECARAKK+LDEMVSKGVKPNS SYDAII+GY N
Sbjct: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKLLDEMVSKGVKPNSSSYDAIIYGYGN 300

Query: 301 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 360
           VGDIE A KVLKSMLEDG+VS +SR YYSL+RSMVKEGEF     TCREIIKRRWVPPFE
Sbjct: 301 VGDIELATKVLKSMLEDGHVSLSSRIYYSLIRSMVKEGEF-----TCREIIKRRWVPPFE 360

Query: 361 AMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           AME LVRGLV +S+VEEAKEVVEKMKK LKGPAVDSWGKIEAALSL
Sbjct: 361 AMEGLVRGLVGISKVEEAKEVVEKMKKMLKGPAVDSWGKIEAALSL 401

[Close]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot
Match: Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-49
Identity = 129/413 (31.23%), Postives = 219/413 (53.03%), Query Frame = 0


Query: 3   AALSRTPRRLFLPSRLHSFPH-----STTPSLQPNSDSPFPS---FRAAKSAILSQSDPE 62
           A LSR      L   L++ P      S +  L P+S +P  S    +AA S + S+ DP+
Sbjct: 2   ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61

Query: 63  KLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRF----DLIDGIIQSHHKSPSAISEGF 122
           ++ +    AS  P  R  R  +  ++  LA  + F    +L+DG I++    P   SE F
Sbjct: 62  RILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR---PDLKSERF 121

Query: 123 WIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSI 182
               I+LY+ A M+D +LR    +   +    + KSL+A+L   L     ++   ++  +
Sbjct: 122 AAHAIVLYAQANMLDHSLRVFRDLEKFE-ISRTVKSLNALLFACLVAKDYKEAKRVYIEM 181

Query: 183 PDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNN 242
           P   G+ P + ++N ++K F +     S+ + + E+ +   K  PN  S+ +++  ++  
Sbjct: 182 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIK--PNSSSFGLMISGFYAE 241

Query: 243 EDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSY 302
           +       ++  +  RG+   ++TYN RI  LCK K+   AK +LD M+S G+KPN+ +Y
Sbjct: 242 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 301

Query: 303 DAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREII 362
             +IHG+CN  D E A K+ K M+  G   P S  Y++L+  + K G+F+ AL  C+E +
Sbjct: 302 SHLIHGFCNEDDFEEAKKLFKIMVNRG-CKPDSECYFTLIYYLCKGGDFETALSLCKESM 361

Query: 363 KRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAAL 404
           ++ WVP F  M+ LV GL   S+VEEAKE++ ++K++     V+ W ++EAAL
Sbjct: 362 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFT-RNVELWNEVEAAL 406

[Close]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot
Match: Q9SAB4 (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11630 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-45
Identity = 109/369 (29.54%), Postives = 206/369 (55.83%), Query Frame = 0


Query: 41  RAAKSAILSQSDPEKLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRF----DLIDGII 100
           R   S + S+++P+++ +     S  P +   R I+  ++  LAR + F     L+DG I
Sbjct: 43  RDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFI 102

Query: 101 QSHHKSPSAISEGFWIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLD 160
           Q+    P   SE F +R I+LY  A M+D++++T   +  ++    + KSL+A+L   L 
Sbjct: 103 QN---QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYE-IPRTVKSLNALLFACLM 162

Query: 161 NSMPEKVHEMFRSIPDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPN 220
               ++ + ++  +P   G+ P + ++N +++   +     S+ + + E+ +   K  P 
Sbjct: 163 AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIK--PT 222

Query: 221 IDSYNILLGAYWNNEDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLD 280
             S+ +++  ++  E       +++ + + G+   +ATYN  I  LCK K+ A AK ++D
Sbjct: 223 AASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALID 282

Query: 281 EMVSKGVKPNSRSYDAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKE 340
            ++S  ++PNS +Y  +IHG+C+  +++ AM + + M+ +GY  P S  Y++L+  + K 
Sbjct: 283 GVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY-KPDSECYFTLIHCLCKG 342

Query: 341 GEFDLALETCREIIKRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSW 400
           G+F+ AL  CRE +++ WVP F  M+ LV GL   S+V+EAKE++  +K++     VD W
Sbjct: 343 GDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFT-RNVDLW 402

Query: 401 GKIEAALSL 406
            ++EAAL L
Sbjct: 403 NEVEAALPL 403

[Close]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.8e-38
Identity = 105/386 (27.20%), Postives = 203/386 (52.59%), Query Frame = 0


Query: 3   AALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSP--FPSFRAAKSAILSQSDPEKLAQSF 62
           ++LSR  R  F    +  F  + T   +P + +    P  ++  S +  + +P+++ + F
Sbjct: 2   SSLSRVLRGTFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKF 61

Query: 63  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 122
            +A     FR    +Y  ++R+L  A+R   ++ I++   K      EGF  R+I LY  
Sbjct: 62  KKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGK 121

Query: 123 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 182
           AGM + A +  ++ + ++ C  S  S +A+LS Y  +   + V E+F  +P ++ + P +
Sbjct: 122 AGMFENAQKVFEE-MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 181

Query: 183 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYN-ILLGAYWNNEDPVGFDGI 242
           VS+N ++KA  +++ L  A   +DE+     K  P+I ++N +LL +Y   +  +G + I
Sbjct: 182 VSYNTLIKALCEKDSLPEAVALLDEIENKGLK--PDIVTFNTLLLSSYLKGQFELG-EEI 241

Query: 243 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 302
             ++ ++ +  ++ TYN R+L L    +      +  E+ + G+KP+  S++A+I G  N
Sbjct: 242 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 301

Query: 303 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 362
            G ++ A    K +++ GY  P   ++  LL +M K G+F+ A+E  +E   +R++    
Sbjct: 302 EGKMDEAEAWYKEIVKHGY-RPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 361

Query: 363 AMEVLVRGLVDMSRVEEAKEVVEKMK 386
            ++ LV  LV  S+ EEA+E+V+  K
Sbjct: 362 TLQQLVDELVKGSKREEAEEIVKIAK 382

[Close]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot
Match: Q9LK58 (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana OX=3702 GN=At3g13150 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-38
Identity = 112/392 (28.57%), Postives = 205/392 (52.30%), Query Frame = 0


Query: 14  LPSRLHS-FPHS---TTPSLQPNS---DSPFPSFRAAKSAIL----------SQSDPEKL 73
           L SRLH  F  S   T  S +P S    + FPS   A +A +            S   KL
Sbjct: 8   LYSRLHGIFKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDGGQSSNDAKDSKNSKL 67

Query: 74  AQ---SFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIR 133
            Q    F ++    +FR+   +Y   IR+L  A++F  ID ++Q   K     SE F IR
Sbjct: 68  TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR 127

Query: 134 LIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDR 193
           +++LY  +GM + A +  D+ +    C+ + KS +A+LS Y+++   ++  + F+ +P++
Sbjct: 128 IMLLYGYSGMAEHAHKLFDE-MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 187

Query: 194 IGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDP 253
           +G+TP +V++N ++KA  ++  +    +  +EL K+  +  P++ S+N LL  ++  E  
Sbjct: 188 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFE--PDLISFNTLLEEFYRRELF 247

Query: 254 VGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAI 313
           V  D I   +  + L  N+ +YN R+  L +NK+   A  ++D M ++G+ P+  +Y+A+
Sbjct: 248 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 307

Query: 314 IHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRR 373
           I  Y    ++E  MK    M E G ++P + +Y  L+  + K+G+ D A+E   E IK +
Sbjct: 308 ITAYRVDNNLEEVMKCYNEMKEKG-LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 367

Query: 374 WVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMK 386
            +      + +V  L+   +++EA ++V+  K
Sbjct: 368 LLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395

[Close]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot
Match: Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-37
Identity = 100/340 (29.41%), Postives = 174/340 (51.18%), Query Frame = 0


Query: 49  SQSDPEKLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISE 108
           S+ DPEKL   F   +        R  +  ++ +LA A R D I+ +++     P    E
Sbjct: 47  SERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRRE 106

Query: 109 GFWIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFR 168
           GF +R+IMLY  AGM  QAL T   + L+  C  S KS +A L V   N     + E   
Sbjct: 107 GFIVRIIMLYGKAGMTKQALDTFFNMDLY-GCKRSVKSFNAALQVLSFNPDLHTIWEFLH 166

Query: 169 SIPDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYW 228
             P + G+    VS N+ +K+F +   L  A   + E+ K  + + P++ +Y  L+ A +
Sbjct: 167 DAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEK--SGLTPDVVTYTTLISALY 226

Query: 229 NNEDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSR 288
            +E  V  +G+   +  +G + NL T+N RI  L   +    A  +L  M    V+P+S 
Sbjct: 227 KHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 286

Query: 289 SYDAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCRE 348
           +Y+ +I G+      + A +V  +M   GY  P  + Y +++  + K G FDLA   C++
Sbjct: 287 TYNMVIKGFFLARFPDMAERVYTAMHGKGY-KPNLKIYQTMIHYLCKAGNFDLAYTMCKD 346

Query: 349 IIKRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRL 389
            ++++W P  + +E+L++GLV   ++++AK ++E + +R+
Sbjct: 347 CMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRV 382

[Close]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL
Match: A0A6J1J8H6 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482304 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.9e-197
Identity = 360/406 (88.67%), Postives = 381/406 (93.84%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSR-LHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQS 60
           MAAALSRT RRLFLPS+ L SF +STTP LQPNSDSPFPSFRAAKSAILSQSDP+KLAQS
Sbjct: 1   MAAALSRTARRLFLPSKLLPSFTYSTTPPLQPNSDSPFPSFRAAKSAILSQSDPDKLAQS 60

Query: 61  FIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYS 120
           FIQ S+LPAFRR+RPIYH+SIRKLARAQRFDLIDGIIQS  K PSAISEGFWIRLIMLYS
Sbjct: 61  FIQYSDLPAFRRHRPIYHYSIRKLARAQRFDLIDGIIQSQLKPPSAISEGFWIRLIMLYS 120

Query: 121 SAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPT 180
           S+GMVDQA+RTLDQVIL+KPCDLSEKSL AVLSVYL+NSMPEKVHEMFR+IP++IGVTPT
Sbjct: 121 SSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPT 180

Query: 181 VVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGI 240
           VVSHNL LKAFVQQNDL+ ARN IDELYKDDAKVVPNIDSYNILLGAYWN  D VGFDGI
Sbjct: 181 VVSHNLALKAFVQQNDLELARNLIDELYKDDAKVVPNIDSYNILLGAYWNKGDLVGFDGI 240

Query: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 300
           VKEISKRGLEFNLATYNYRILRLCKNKECARAKK+LDEMVSKGVKPNS SYDAII+GY N
Sbjct: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKLLDEMVSKGVKPNSSSYDAIIYGYGN 300

Query: 301 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 360
           VGDIE A KVLKSMLEDG+VS +SR YYSL+RSMVKEGEFDLALETCREIIKRRWVPPFE
Sbjct: 301 VGDIELATKVLKSMLEDGHVSLSSRIYYSLIRSMVKEGEFDLALETCREIIKRRWVPPFE 360

Query: 361 AMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           AME LVRGLV +S+VEEAKEVVEKMKK LKGPAVDSWGKIEAALSL
Sbjct: 361 AMEGLVRGLVGISKVEEAKEVVEKMKKMLKGPAVDSWGKIEAALSL 406

[Close]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL
Match: A0A5A7UGZ0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007730 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.2e-193
Identity = 343/405 (84.69%), Postives = 370/405 (91.36%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSF 60
           MAAAL RTPRRLFL SRLHSF +STT  LQPNSDSPF SFRAAKSAILSQSDPEKLAQSF
Sbjct: 1   MAAALPRTPRRLFLISRLHSFAYSTTLPLQPNSDSPFSSFRAAKSAILSQSDPEKLAQSF 60

Query: 61  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 120
           IQAS+ P+FRRYRPIYH SIRKLARAQRFDLID IIQSH KSPSA SEGFWIRLIMLYSS
Sbjct: 61  IQASSFPSFRRYRPIYHQSIRKLARAQRFDLIDDIIQSHLKSPSATSEGFWIRLIMLYSS 120

Query: 121 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 180
            GMV QAL  LDQ ILHKPC+LSEKSL A+LSVYLDNSMPEKVHEMFRS P++IGVTPTV
Sbjct: 121 VGMVSQALHILDQAILHKPCNLSEKSLCAILSVYLDNSMPEKVHEMFRSTPEKIGVTPTV 180

Query: 181 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIV 240
           +SHNLVLKAFV+QNDL SARNWIDELYKDDAKV+PNIDSY ILLGAYW+N D VGFD I+
Sbjct: 181 ISHNLVLKAFVRQNDLPSARNWIDELYKDDAKVIPNIDSYTILLGAYWSNGDMVGFDEIM 240

Query: 241 KEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNV 300
           KEI  RGLEFN+ATYNYRI RLCKNKECARAKK+LDEM+SKGVKPNS SYD+IIHGYC+V
Sbjct: 241 KEILNRGLEFNIATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300

Query: 301 GDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEA 360
           GDIESAMK+LK MLEDG+VSPTSR Y+ L+RSMVKEGEFDLAL+TCR+++KRRWVPPFE 
Sbjct: 301 GDIESAMKILKGMLEDGHVSPTSRIYFRLIRSMVKEGEFDLALDTCRQMLKRRWVPPFET 360

Query: 361 MEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           ME LVRGLV MS+VEEAKEVVEKMKKRLKGPAVDSW KIEA L+L
Sbjct: 361 MEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEATLAL 405

[Close]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL
Match: A0A1S3B7X6 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486977 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.2e-193
Identity = 343/405 (84.69%), Postives = 370/405 (91.36%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSF 60
           MAAAL RTPRRLFL SRLHSF +STT  LQPNSDSPF SFRAAKSAILSQSDPEKLAQSF
Sbjct: 1   MAAALPRTPRRLFLISRLHSFAYSTTLPLQPNSDSPFSSFRAAKSAILSQSDPEKLAQSF 60

Query: 61  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 120
           IQAS+ P+FRRYRPIYH SIRKLARAQRFDLID IIQSH KSPSA SEGFWIRLIMLYSS
Sbjct: 61  IQASSFPSFRRYRPIYHQSIRKLARAQRFDLIDDIIQSHLKSPSATSEGFWIRLIMLYSS 120

Query: 121 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 180
            GMV QAL  LDQ ILHKPC+LSEKSL A+LSVYLDNSMPEKVHEMFRS P++IGVTPTV
Sbjct: 121 VGMVSQALHILDQAILHKPCNLSEKSLCAILSVYLDNSMPEKVHEMFRSTPEKIGVTPTV 180

Query: 181 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIV 240
           +SHNLVLKAFV+QNDL SARNWIDELYKDDAKV+PNIDSY ILLGAYW+N D VGFD I+
Sbjct: 181 ISHNLVLKAFVRQNDLPSARNWIDELYKDDAKVIPNIDSYTILLGAYWSNGDMVGFDEIM 240

Query: 241 KEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNV 300
           KEI  RGLEFN+ATYNYRI RLCKNKECARAKK+LDEM+SKGVKPNS SYD+IIHGYC+V
Sbjct: 241 KEILNRGLEFNIATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300

Query: 301 GDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEA 360
           GDIESAMK+LK MLEDG+VSPTSR Y+ L+RSMVKEGEFDLAL+TCR+++KRRWVPPFE 
Sbjct: 301 GDIESAMKILKGMLEDGHVSPTSRIYFRLIRSMVKEGEFDLALDTCRQMLKRRWVPPFET 360

Query: 361 MEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           ME LVRGLV MS+VEEAKEVVEKMKKRLKGPAVDSW KIEA L+L
Sbjct: 361 MEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEATLAL 405

[Close]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL
Match: A0A0A0LF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824840 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.1e-193
Identity = 345/405 (85.19%), Postives = 370/405 (91.36%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQSF 60
           MAAAL RTPRRLFL SRLHSF +STTP LQP SDSPFPS RAAKSAILSQSDP+KLAQSF
Sbjct: 1   MAAALPRTPRRLFLISRLHSFSYSTTPPLQPTSDSPFPSLRAAKSAILSQSDPDKLAQSF 60

Query: 61  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 120
           IQAS LP+F RYRPIYH SIRKLARAQRFDLID IIQSHHKSPSA SEGFWIRLIMLYSS
Sbjct: 61  IQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHHKSPSATSEGFWIRLIMLYSS 120

Query: 121 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 180
            GMV+QAL  LDQ ILHK C+LSEKSL A+LSV+LDNSMPEKVHEMFRSIP++IGVTPT 
Sbjct: 121 VGMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTA 180

Query: 181 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGIV 240
           VSHNLVLKAFV+QNDL SARNWIDEL KDDAKV+PNIDS+ ILLGAYW+N D +GFD I 
Sbjct: 181 VSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIE 240

Query: 241 KEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCNV 300
           KEISKRGLEFNLATYNYRI RLCKNKECARAKK+LDEM+SKGVKPNS SYD+IIHGYC+V
Sbjct: 241 KEISKRGLEFNLATYNYRISRLCKNKECARAKKILDEMISKGVKPNSSSYDSIIHGYCDV 300

Query: 301 GDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFEA 360
           GDIESAMK+LK +LEDG+VSPTSR YY L+RSMVKEGEF++ALETCRE IKRRWVPPFEA
Sbjct: 301 GDIESAMKILKGILEDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEA 360

Query: 361 MEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           ME LVRGLV MS+VEEAKEVVEKMKKRLKGPAVDSW KIEAAL L
Sbjct: 361 MEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSWRKIEAALPL 405

[Close]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL
Match: A0A6J1J6X0 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482304 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 3.0e-192
Identity = 355/406 (87.44%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAALSRTPRRLFLPSR-LHSFPHSTTPSLQPNSDSPFPSFRAAKSAILSQSDPEKLAQS 60
           MAAALSRT RRLFLPS+ L SF +STTP LQPNSDSPFPSFRAAKSAILSQSDP+KLAQS
Sbjct: 1   MAAALSRTARRLFLPSKLLPSFTYSTTPPLQPNSDSPFPSFRAAKSAILSQSDPDKLAQS 60

Query: 61  FIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYS 120
           FIQ S+LPAFRR+RPIYH+SIRKLARAQRFDLIDGIIQS  K PSAISEGFWIRLIMLYS
Sbjct: 61  FIQYSDLPAFRRHRPIYHYSIRKLARAQRFDLIDGIIQSQLKPPSAISEGFWIRLIMLYS 120

Query: 121 SAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPT 180
           S+GMVDQA+RTLDQVIL+KPCDLSEKSL AVLSVYL+NSMPEKVHEMFR+IP++IGVTPT
Sbjct: 121 SSGMVDQAIRTLDQVILNKPCDLSEKSLCAVLSVYLNNSMPEKVHEMFRTIPEKIGVTPT 180

Query: 181 VVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDPVGFDGI 240
           VVSHNL LKAFVQQNDL+ ARN IDELYKDDAKVVPNIDSYNILLGAYWN  D VGFDGI
Sbjct: 181 VVSHNLALKAFVQQNDLELARNLIDELYKDDAKVVPNIDSYNILLGAYWNKGDLVGFDGI 240

Query: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 300
           VKEISKRGLEFNLATYNYRILRLCKNKECARAKK+LDEMVSKGVKPNS SYDAII+GY N
Sbjct: 241 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKLLDEMVSKGVKPNSSSYDAIIYGYGN 300

Query: 301 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 360
           VGDIE A KVLKSMLEDG+VS +SR YYSL+RSMVKEGEF     TCREIIKRRWVPPFE
Sbjct: 301 VGDIELATKVLKSMLEDGHVSLSSRIYYSLIRSMVKEGEF-----TCREIIKRRWVPPFE 360

Query: 361 AMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAALSL 406
           AME LVRGLV +S+VEEAKEVVEKMKK LKGPAVDSWGKIEAALSL
Sbjct: 361 AMEGLVRGLVGISKVEEAKEVVEKMKKMLKGPAVDSWGKIEAALSL 401

[Close]

BLAST of CcUC10G200690 vs. TAIR 10
Match: AT1G61870.1 (pentatricopeptide repeat 336 )

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-50
Identity = 129/413 (31.23%), Postives = 219/413 (53.03%), Query Frame = 0


Query: 3   AALSRTPRRLFLPSRLHSFPH-----STTPSLQPNSDSPFPS---FRAAKSAILSQSDPE 62
           A LSR      L   L++ P      S +  L P+S +P  S    +AA S + S+ DP+
Sbjct: 2   ALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPD 61

Query: 63  KLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRF----DLIDGIIQSHHKSPSAISEGF 122
           ++ +    AS  P  R  R  +  ++  LA  + F    +L+DG I++    P   SE F
Sbjct: 62  RILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENR---PDLKSERF 121

Query: 123 WIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSI 182
               I+LY+ A M+D +LR    +   +    + KSL+A+L   L     ++   ++  +
Sbjct: 122 AAHAIVLYAQANMLDHSLRVFRDLEKFE-ISRTVKSLNALLFACLVAKDYKEAKRVYIEM 181

Query: 183 PDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNN 242
           P   G+ P + ++N ++K F +     S+ + + E+ +   K  PN  S+ +++  ++  
Sbjct: 182 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIK--PNSSSFGLMISGFYAE 241

Query: 243 EDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSY 302
           +       ++  +  RG+   ++TYN RI  LCK K+   AK +LD M+S G+KPN+ +Y
Sbjct: 242 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 301

Query: 303 DAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREII 362
             +IHG+CN  D E A K+ K M+  G   P S  Y++L+  + K G+F+ AL  C+E +
Sbjct: 302 SHLIHGFCNEDDFEEAKKLFKIMVNRG-CKPDSECYFTLIYYLCKGGDFETALSLCKESM 361

Query: 363 KRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSWGKIEAAL 404
           ++ WVP F  M+ LV GL   S+VEEAKE++ ++K++     V+ W ++EAAL
Sbjct: 362 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFT-RNVELWNEVEAAL 406

[Close]

BLAST of CcUC10G200690 vs. TAIR 10
Match: AT1G11630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-46
Identity = 109/369 (29.54%), Postives = 206/369 (55.83%), Query Frame = 0


Query: 41  RAAKSAILSQSDPEKLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRF----DLIDGII 100
           R   S + S+++P+++ +     S  P +   R I+  ++  LAR + F     L+DG I
Sbjct: 43  RDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFI 102

Query: 101 QSHHKSPSAISEGFWIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLD 160
           Q+    P   SE F +R I+LY  A M+D++++T   +  ++    + KSL+A+L   L 
Sbjct: 103 QN---QPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYE-IPRTVKSLNALLFACLM 162

Query: 161 NSMPEKVHEMFRSIPDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPN 220
               ++ + ++  +P   G+ P + ++N +++   +     S+ + + E+ +   K  P 
Sbjct: 163 AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIK--PT 222

Query: 221 IDSYNILLGAYWNNEDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLD 280
             S+ +++  ++  E       +++ + + G+   +ATYN  I  LCK K+ A AK ++D
Sbjct: 223 AASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALID 282

Query: 281 EMVSKGVKPNSRSYDAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKE 340
            ++S  ++PNS +Y  +IHG+C+  +++ AM + + M+ +GY  P S  Y++L+  + K 
Sbjct: 283 GVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGY-KPDSECYFTLIHCLCKG 342

Query: 341 GEFDLALETCREIIKRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRLKGPAVDSW 400
           G+F+ AL  CRE +++ WVP F  M+ LV GL   S+V+EAKE++  +K++     VD W
Sbjct: 343 GDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFT-RNVDLW 402

Query: 401 GKIEAALSL 406
            ++EAAL L
Sbjct: 403 NEVEAALPL 403

[Close]

BLAST of CcUC10G200690 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-39
Identity = 105/386 (27.20%), Postives = 203/386 (52.59%), Query Frame = 0


Query: 3   AALSRTPRRLFLPSRLHSFPHSTTPSLQPNSDSP--FPSFRAAKSAILSQSDPEKLAQSF 62
           ++LSR  R  F    +  F  + T   +P + +    P  ++  S +  + +P+++ + F
Sbjct: 2   SSLSRVLRGTFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKF 61

Query: 63  IQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIRLIMLYSS 122
            +A     FR    +Y  ++R+L  A+R   ++ I++   K      EGF  R+I LY  
Sbjct: 62  KKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGK 121

Query: 123 AGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDRIGVTPTV 182
           AGM + A +  ++ + ++ C  S  S +A+LS Y  +   + V E+F  +P ++ + P +
Sbjct: 122 AGMFENAQKVFEE-MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 181

Query: 183 VSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYN-ILLGAYWNNEDPVGFDGI 242
           VS+N ++KA  +++ L  A   +DE+     K  P+I ++N +LL +Y   +  +G + I
Sbjct: 182 VSYNTLIKALCEKDSLPEAVALLDEIENKGLK--PDIVTFNTLLLSSYLKGQFELG-EEI 241

Query: 243 VKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAIIHGYCN 302
             ++ ++ +  ++ TYN R+L L    +      +  E+ + G+KP+  S++A+I G  N
Sbjct: 242 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 301

Query: 303 VGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRRWVPPFE 362
            G ++ A    K +++ GY  P   ++  LL +M K G+F+ A+E  +E   +R++    
Sbjct: 302 EGKMDEAEAWYKEIVKHGY-RPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 361

Query: 363 AMEVLVRGLVDMSRVEEAKEVVEKMK 386
            ++ LV  LV  S+ EEA+E+V+  K
Sbjct: 362 TLQQLVDELVKGSKREEAEEIVKIAK 382

[Close]

BLAST of CcUC10G200690 vs. TAIR 10
Match: AT3G13150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.4e-39
Identity = 112/392 (28.57%), Postives = 205/392 (52.30%), Query Frame = 0


Query: 14  LPSRLHS-FPHS---TTPSLQPNS---DSPFPSFRAAKSAIL----------SQSDPEKL 73
           L SRLH  F  S   T  S +P S    + FPS   A +A +            S   KL
Sbjct: 8   LYSRLHGIFKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDGGQSSNDAKDSKNSKL 67

Query: 74  AQ---SFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISEGFWIR 133
            Q    F ++    +FR+   +Y   IR+L  A++F  ID ++Q   K     SE F IR
Sbjct: 68  TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR 127

Query: 134 LIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFRSIPDR 193
           +++LY  +GM + A +  D+ +    C+ + KS +A+LS Y+++   ++  + F+ +P++
Sbjct: 128 IMLLYGYSGMAEHAHKLFDE-MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 187

Query: 194 IGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYWNNEDP 253
           +G+TP +V++N ++KA  ++  +    +  +EL K+  +  P++ S+N LL  ++  E  
Sbjct: 188 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFE--PDLISFNTLLEEFYRRELF 247

Query: 254 VGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSRSYDAI 313
           V  D I   +  + L  N+ +YN R+  L +NK+   A  ++D M ++G+ P+  +Y+A+
Sbjct: 248 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 307

Query: 314 IHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCREIIKRR 373
           I  Y    ++E  MK    M E G ++P + +Y  L+  + K+G+ D A+E   E IK +
Sbjct: 308 ITAYRVDNNLEEVMKCYNEMKEKG-LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK 367

Query: 374 WVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMK 386
            +      + +V  L+   +++EA ++V+  K
Sbjct: 368 LLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395

[Close]

BLAST of CcUC10G200690 vs. TAIR 10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-38
Identity = 100/340 (29.41%), Postives = 174/340 (51.18%), Query Frame = 0


Query: 49  SQSDPEKLAQSFIQASNLPAFRRYRPIYHHSIRKLARAQRFDLIDGIIQSHHKSPSAISE 108
           S+ DPEKL   F   +        R  +  ++ +LA A R D I+ +++     P    E
Sbjct: 47  SERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRRE 106

Query: 109 GFWIRLIMLYSSAGMVDQALRTLDQVILHKPCDLSEKSLSAVLSVYLDNSMPEKVHEMFR 168
           GF +R+IMLY  AGM  QAL T   + L+  C  S KS +A L V   N     + E   
Sbjct: 107 GFIVRIIMLYGKAGMTKQALDTFFNMDLY-GCKRSVKSFNAALQVLSFNPDLHTIWEFLH 166

Query: 169 SIPDRIGVTPTVVSHNLVLKAFVQQNDLQSARNWIDELYKDDAKVVPNIDSYNILLGAYW 228
             P + G+    VS N+ +K+F +   L  A   + E+ K  + + P++ +Y  L+ A +
Sbjct: 167 DAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEK--SGLTPDVVTYTTLISALY 226

Query: 229 NNEDPVGFDGIVKEISKRGLEFNLATYNYRILRLCKNKECARAKKMLDEMVSKGVKPNSR 288
            +E  V  +G+   +  +G + NL T+N RI  L   +    A  +L  M    V+P+S 
Sbjct: 227 KHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 286

Query: 289 SYDAIIHGYCNVGDIESAMKVLKSMLEDGYVSPTSRSYYSLLRSMVKEGEFDLALETCRE 348
           +Y+ +I G+      + A +V  +M   GY  P  + Y +++  + K G FDLA   C++
Sbjct: 287 TYNMVIKGFFLARFPDMAERVYTAMHGKGY-KPNLKIYQTMIHYLCKAGNFDLAYTMCKD 346

Query: 349 IIKRRWVPPFEAMEVLVRGLVDMSRVEEAKEVVEKMKKRL 389
            ++++W P  + +E+L++GLV   ++++AK ++E + +R+
Sbjct: 347 CMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRV 382

The following BLAST results are available for this feature:

BLAST of CcUC10G200690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906046.1	7.8e-211	92.38	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Benin...	[more]
XP_022983789.1	1.4e-196	88.67	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isofor...	[more]
XP_008443376.1	2.5e-193	84.69	PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-...	[more]
XP_004136798.1	4.3e-193	85.19	pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Cucumis sa...	[more]
XP_022983790.1	6.2e-192	87.44	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isofor...	[more]

BLAST of CcUC10G200690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LE47	1.6e-49	31.23	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
Q9SAB4	3.1e-45	29.54	Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop...	[more]
Q9LG23	2.8e-38	27.20	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
Q9LK58	4.8e-38	28.57	Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana OX...	[more]
Q8GW57	2.4e-37	29.41	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]

BLAST of CcUC10G200690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8H6	6.9e-197	88.67	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isofor...	[more]
A0A5A7UGZ0	1.2e-193	84.69	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B7X6	1.2e-193	84.69	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like OS=Cuc...	[more]
A0A0A0LF76	2.1e-193	85.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824840 PE=4 SV=1	[more]
A0A6J1J6X0	3.0e-192	87.44	pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like isofor...	[more]

BLAST of CcUC10G200690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61870.1	1.1e-50	31.23	pentatricopeptide repeat 336	[more]
AT1G11630.1	2.2e-46	29.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G55890.1	2.0e-39	27.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13150.1	3.4e-39	28.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80150.1	1.7e-38	29.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 363..387 e-value: 0.17 score: 12.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 173..229 e-value: 1.6E-5 score: 24.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 325..356 e-value: 1.7E-4 score: 19.5 coord: 254..287 e-value: 9.8E-6 score: 23.4 coord: 289..319 e-value: 1.1E-7 score: 29.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 9.021208
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 251..285 score: 10.544828
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 286..320 score: 11.750571
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 236..404 e-value: 2.6E-31 score: 111.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 38..234 e-value: 7.8E-18 score: 66.4
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 241..352 e-value: 2.9E-11 score: 43.1
None	No IPR available	PANTHER	PTHR46128:SF264	REPEAT 336, PUTATIVE-RELATED	coord: 24..403
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 24..403
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 253..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G200690.1	CcUC10G200690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding