CcUC10G200070 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G200070
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr10: 26918018 .. 26920057 (-)
RNA-Seq ExpressionCcUC10G200070
SyntenyCcUC10G200070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTCTCCTCGATTCAATTACAATCACCTTCATCCTTCTCTTCCCTCATCCCTTTCTTCCTAATCGAAACCAGAAATCACCCCAAATTTCGTTTCAACAAGATCAAAACAAAGCCCAGAACTCTTATTCCAATCCTCAGAGCCTCATCTTTTCCAACATCCAAAGATATATGGAGAAGAAAAACTCCATCTGAAAAATCAACCACAACCCCATTTCCTCAAAAGTACCAACGCAATGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTCGACATGGATGAGCTTTTAGCGTCAATTGGGGAAACGAAGAACGAGCAAGAGTTGTACTCGGTTTTGTCGCCATACAAGGGGCGGCAGCTTTCAATGCGGTTCATGGTGTCGATTCTGTCGCGAGAATCAGACTGGCAAAGGTCGCTTGCGATTCTTGATTGGATCAACGAAGAGGCTCTCTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCACATGGACTGTTCGACGAAATGCGCCAAAGAGCTCTCGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTTTCATGGCTACAAAAGATGGAGCAAGATCGTGTGTCTGGCGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCCGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTAAAGAGATCTGGGATCACCCCAGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGATGTTGTGCCTGATACTGTTAGCTACTCGACTTTGCTGAGTATTTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAAATGACAGAGGTTAACTGCCCGCTCGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAACACTATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCAATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTGAGCAGAACGTTGTGACATATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGAGATGCAAAATAGAGGGATTGAACCGAATGCTATTACATACTCGACAATCATTTCGATATGGGGAAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAAAGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCATCCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGGAGAATCGAAGAAGCCACTTGGATTTTTCGTCAGGCGTTTGAGGCAGGAGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATTGATTTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAACGTGGGACATTTTCCCAACTCTAATGTTATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGATTTTGACAAGGCTGATGCTGTATATATGGAGATGCAAGAAGAGTGCTGTGTTTTTCCAGATGAAGTGCACTTCCAAATGCTTAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATCAATAAGAAGGAATTGCATCTAGTCGTCGCCAGTATTTACGAAAGAGCTAATCGACTTAATGATGCATCTCGGATTATGAACAGAATGAACGAAATGACAATTTCAAGATCATGA

mRNA sequence

ATGGGCTTCTCCTCGATTCAATTACAATCACCTTCATCCTTCTCTTCCCTCATCCCTTTCTTCCTAATCGAAACCAGAAATCACCCCAAATTTCGTTTCAACAAGATCAAAACAAAGCCCAGAACTCTTATTCCAATCCTCAGAGCCTCATCTTTTCCAACATCCAAAGATATATGGAGAAGAAAAACTCCATCTGAAAAATCAACCACAACCCCATTTCCTCAAAAGTACCAACGCAATGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTCGACATGGATGAGCTTTTAGCGTCAATTGGGGAAACGAAGAACGAGCAAGAGTTGTACTCGGTTTTGTCGCCATACAAGGGGCGGCAGCTTTCAATGCGGTTCATGGTGTCGATTCTGTCGCGAGAATCAGACTGGCAAAGGTCGCTTGCGATTCTTGATTGGATCAACGAAGAGGCTCTCTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCACATGGACTGTTCGACGAAATGCGCCAAAGAGCTCTCGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTTTCATGGCTACAAAAGATGGAGCAAGATCGTGTGTCTGGCGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCCGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTAAAGAGATCTGGGATCACCCCAGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGATGTTGTGCCTGATACTGTTAGCTACTCGACTTTGCTGAGTATTTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAAATGACAGAGGTTAACTGCCCGCTCGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAACACTATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCAATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTGAGCAGAACGTTGTGACATATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGAGATGCAAAATAGAGGGATTGAACCGAATGCTATTACATACTCGACAATCATTTCGATATGGGGAAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAAAGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCATCCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGGAGAATCGAAGAAGCCACTTGGATTTTTCGTCAGGCGTTTGAGGCAGGAGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATTGATTTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAACGTGGGACATTTTCCCAACTCTAATGTTATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGATTTTGACAAGGCTGATGCTGTATATATGGAGATGCAAGAAGAGTGCTGTGTTTTTCCAGATGAAGTGCACTTCCAAATGCTTAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATCAATAAGAAGGAATTGCATCTAGTCGTCGCCAGTATTTACGAAAGAGCTAATCGACTTAATGATGCATCTCGGATTATGAACAGAATGAACGAAATGACAATTTCAAGATCATGA

Coding sequence (CDS)

ATGGGCTTCTCCTCGATTCAATTACAATCACCTTCATCCTTCTCTTCCCTCATCCCTTTCTTCCTAATCGAAACCAGAAATCACCCCAAATTTCGTTTCAACAAGATCAAAACAAAGCCCAGAACTCTTATTCCAATCCTCAGAGCCTCATCTTTTCCAACATCCAAAGATATATGGAGAAGAAAAACTCCATCTGAAAAATCAACCACAACCCCATTTCCTCAAAAGTACCAACGCAATGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTCGACATGGATGAGCTTTTAGCGTCAATTGGGGAAACGAAGAACGAGCAAGAGTTGTACTCGGTTTTGTCGCCATACAAGGGGCGGCAGCTTTCAATGCGGTTCATGGTGTCGATTCTGTCGCGAGAATCAGACTGGCAAAGGTCGCTTGCGATTCTTGATTGGATCAACGAAGAGGCTCTCTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCACATGGACTGTTCGACGAAATGCGCCAAAGAGCTCTCGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTTTCATGGCTACAAAAGATGGAGCAAGATCGTGTGTCTGGCGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCCGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTAAAGAGATCTGGGATCACCCCAGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGATGTTGTGCCTGATACTGTTAGCTACTCGACTTTGCTGAGTATTTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAAATGACAGAGGTTAACTGCCCGCTCGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAACACTATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCAATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTGAGCAGAACGTTGTGACATATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGAGATGCAAAATAGAGGGATTGAACCGAATGCTATTACATACTCGACAATCATTTCGATATGGGGAAAAGCAGGAAAGTTGGAGAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGAAAGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCATCCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGGAGAATCGAAGAAGCCACTTGGATTTTTCGTCAGGCGTTTGAGGCAGGAGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATTGATTTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAACGTGGGACATTTTCCCAACTCTAATGTTATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGATTTTGACAAGGCTGATGCTGTATATATGGAGATGCAAGAAGAGTGCTGTGTTTTTCCAGATGAAGTGCACTTCCAAATGCTTAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCTGATCCCAATATCAATAAGAAGGAATTGCATCTAGTCGTCGCCAGTATTTACGAAAGAGCTAATCGACTTAATGATGCATCTCGGATTATGAACAGAATGAACGAAATGACAATTTCAAGATCATGA

Protein sequence

MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDASRIMNRMNEMTISRS
Homology
[Close]
BLAST of CcUC10G200070 vs. NCBI nr
Match: XP_008443439.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis melo] >KAA0053737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25666.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1254.2 bits (3244), Expect = 0.0e+00
Identity = 642/679 (94.55%), Postives = 658/679 (96.91%), Query Frame = 0 

Query: 1   MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWR 60
           MGFSSIQLQS  SFSS IP FLIETR++PK RFNKIKTKPRT IPI RASS   SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120
           RKTPSEKSTTT  PQKYQR+ARRQRESSHLDHS+DMDELLASIG+TKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180
           GRQLSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 300
           KL DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360
           SYSTLL++FVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW M
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 480
           EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 540
           IVAYEKAGLVAHAKRLLHELK PDNIPRKTAITILAKAGRIEEATW+FRQAF+AGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 600
           SVFGCMIDLFSRNKKHKNVVEVFEKMR+VGHFPNSNVIALVLNAYGKLRDFD ADAVYME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 660
           MQE+ C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NR
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

Query: 661 LNDASRIMNRMNEMTISRS 680
           LN+ASRIMNRMNE  ISRS
Sbjct: 661 LNNASRIMNRMNETAISRS 679

[Close]
BLAST of CcUC10G200070 vs. NCBI nr
Match: XP_038903074.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Benincasa hispida])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 641/679 (94.40%), Postives = 652/679 (96.02%), Query Frame = 0 

Query: 1   MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWR 60
           MGFSSIQLQS SSFSS I  FLIET N+PK RFN IK KPRT IPILRASS  T KDIWR
Sbjct: 1   MGFSSIQLQSTSSFSSPILSFLIETGNYPKIRFNNIKPKPRTRIPILRASSSSTFKDIWR 60

Query: 61  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120
           RK PSEKSTTTPFP KYQR+ RRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK
Sbjct: 61  RKIPSEKSTTTPFPLKYQRSVRRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120

Query: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180
           GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEG+FDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGLFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 300
           KL DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRA+ VVPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAMGVVPDTV 300

Query: 301 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360
           SYSTLLS+FVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM
Sbjct: 301 SYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG SLEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGLSLEH 420

Query: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 480
           EKATNLVQEMQNR IEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSG EIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRRIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGTEIDQVLYQTM 480

Query: 481 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 540
           IVAYEKAGLVAHAKRLLHELK PDNIPRKTAITILAKAGRIEEATW+FRQAF+AGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 600
           SVFGCMIDLFSRN+KHKNVVEVFEKMR+VGHFP+ NVIALVLNAYGKLRDFDKADAVYME
Sbjct: 541 SVFGCMIDLFSRNRKHKNVVEVFEKMRSVGHFPDPNVIALVLNAYGKLRDFDKADAVYME 600

Query: 601 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 660
           MQEE CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVAS YER NR
Sbjct: 601 MQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASTYERTNR 660

Query: 661 LNDASRIMNRMNEMTISRS 680
            NDASRIMNRMNEM ISR+
Sbjct: 661 FNDASRIMNRMNEMAISRT 679

[Close]
BLAST of CcUC10G200070 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1229.9 bits (3181), Expect = 0.0e+00
Identity = 629/676 (93.05%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 4   SSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKT 63
           SS+QLQS SSFSS +   LIETRN+ K   ++ K+KPR  I + RASS  TSKD+WRRKT
Sbjct: 10  SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTSKDVWRRKT 69

Query: 64  PSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQ 123
           PSEKSTTTPFPQKY+R+ARRQRESSHLDHSVDMDELLASIG+TKNEQELYS+LSPYKGRQ
Sbjct: 70  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 129

Query: 124 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD
Sbjct: 130 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 189

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLR 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL 
Sbjct: 190 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 249

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS
Sbjct: 250 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 309

Query: 304 TLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 363
           TLLS+FVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 310 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 369

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 370 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 429

Query: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 483
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 430 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 489

Query: 484 YEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVF 543
           YE+AGLVAHAKRL+ ELK PDNIPRKTAITILA+AGR+EEATW+FRQAF+AGELKDISVF
Sbjct: 490 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 549

Query: 544 GCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 603
           GCMIDLFSRNKKHKNVVEVFEKMR+VGHFP+SNVIALVLNAYGKLRDFDKADAVY EMQE
Sbjct: 550 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYTEMQE 609

Query: 604 ECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 663
           E CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 610 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 669

Query: 664 ASRIMNRMNEMTISRS 680
           ASRIMNRMNEM+ISRS
Sbjct: 670 ASRIMNRMNEMSISRS 685

[Close]
BLAST of CcUC10G200070 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/676 (93.20%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 4   SSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKT 63
           SS+QLQS SSFSS +   LIETRN+ K   ++ K+KPR  I I RASS  TSKDIWRRKT
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQ 123
            SEKSTTTPFPQKY+R+ARRQRESSHLDHSVDMDELLASIG+TKNEQELYS+LSPYKGRQ
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLR 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNLIELSRKL 
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 363
           TLLS+FVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 483
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVF 543
           YE+AGLVAHAKRL+ ELK PDNIPRKTAITILA+AGR+EEATW+FRQAF+AGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 GCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 603
           GCMIDLFSRNKKHKNVVEVFEKMR+VGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 ECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 663
           E CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 664 ASRIMNRMNEMTISRS 680
           ASRIMNRMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]
BLAST of CcUC10G200070 vs. NCBI nr
Match: XP_022983728.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 628/676 (92.90%), Postives = 653/676 (96.60%), Query Frame = 0 

Query: 4   SSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKT 63
           SS+QLQS SSFSS +   L ETRN+ K   ++ K+KPR  I I RASS  TSKDIWRRKT
Sbjct: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQ 123
           PSEKSTTTPFPQKY+R+ARRQRESSHLDHSVDMDELLASIG+TKNEQELYS+LSPYKGRQ
Sbjct: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLR 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL 
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 363
           TLLS+FVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 483
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVF 543
           YE+AGLVAHAKRL+ ELK PDNIPRKTAITILA+AGR+EEATW+FRQAF+AGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 GCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 603
           GCMIDLFSRNK+HKNVVEVFEKMR+VGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 ECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 663
           + CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IYERANRLND
Sbjct: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLND 668

Query: 664 ASRIMNRMNEMTISRS 680
           ASRIMNRMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 6.4e-293
Identity = 520/676 (76.92%), Postives = 597/676 (88.31%), Query Frame = 0 

Query: 6   IQLQSPSSFS-SLIPFFLIETRNHPKFRFNKI-KTKPRTLIPILRASSFPTS---KDIWR 65
           I++ S SS S  L+P  L     +    F+ I + + R LI  + ASS   S   K +WR
Sbjct: 3   IEIASSSSLSLPLLP--LTRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVWR 62

Query: 66  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 125
           ++   EK+TT+ F  +  R  RR + S+ LDH+VDMDELLASI +T+NE+EL+S+LS YK
Sbjct: 63  KQ--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYK 122

Query: 126 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 185
            RQLS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++AHG
Sbjct: 123 DRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHG 182

Query: 186 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 245
           LFDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 183 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 242

Query: 246 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 305
           +L DYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TV
Sbjct: 243 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 302

Query: 306 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 365
           SYSTLLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+
Sbjct: 303 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 362

Query: 366 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 425
           RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EH
Sbjct: 363 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 422

Query: 426 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 485
           EKATNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTM
Sbjct: 423 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 482

Query: 486 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 545
           IVAYE+ GL+ HAKRLLHELK PDNIPR+TAITILAKAGR EEATW+FRQAFE+GE+KDI
Sbjct: 483 IVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 542

Query: 546 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 605
           SVFGCMI+L+SRN+++ NV+EVFEKMR  G+FP+SNVIA+VLNAYGK R+F+KAD VY E
Sbjct: 543 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 602

Query: 606 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 665
           MQEE CVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++
Sbjct: 603 MQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADK 662

Query: 666 LNDASRIMNRMNEMTI 677
           LNDASR+MNRM E  I
Sbjct: 663 LNDASRVMNRMRERGI 672

[Close]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match: Q9LS88 (Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX=3702 GN=At3g23020 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-53
Identity = 151/613 (24.63%), Postives = 285/613 (46.49%), Query Frame = 0 

Query: 110 QELYSVLSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 169
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 170 LRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 229
            +A +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 230 VLYSNLIELSRKLRDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 289
           V    ++++ +K R++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 290 RFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 349
               K M    +VP TV+++T++ I+  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 350 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 409
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 410 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 469
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 470 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLV 529
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 530 AHAKRLLHELKH----PDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVFGCM 589
              +  L +++      D IP    I+   K G++  A  ++++  E     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 590 IDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEC- 649
           I+ F+     +  +   E M+  G   NS +   ++  Y K+   D+A+A+Y ++ + C 
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 650 -CVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 677
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 2.6e-52
Identity = 134/451 (29.71%), Postives = 236/451 (52.33%), Query Frame = 0 

Query: 155 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 214
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 215 SWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGITPDIVAYNSMINVF 274
           S L+KME+ ++  D+V+Y+ +I+     ++ + A+++F+ +   GI P++V YNS+I   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 275 GKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDL 334
                + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +   D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 335 TTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
            T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + LFR 
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 395 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGK 454
           M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 455 LERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----HPDNIPRKT 514
           LE+A ++F+ L+ S  E D   Y  MI    KAG V     L   L      P+ I   T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 515 AITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRNVG 574
            I+   + G  EEA  +FR+  E G L +   +  +I    R+       E+ ++MR+ G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 575 HFPNSNVIALVLNAYGKLRDFDKADAVYMEM 602
              +++ I++V+N    L D  + +  Y+EM
Sbjct: 601 FVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.0e-50
Identity = 128/446 (28.70%), Postives = 231/446 (51.79%), Query Frame = 0 

Query: 142 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 201
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 202 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGIT 261
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K +    A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 262 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSV 321
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 322 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 381
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 382 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 441
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 442 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK 501
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    KAG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 502 ----HPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHK 561
                P+ I   T I+   + G  EEA  + ++  E G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 562 NVVEVFEKMRNVGHFPNSNVIALVLN 584
              E+ ++MR+ G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-48
Identity = 125/433 (28.87%), Postives = 219/433 (50.58%), Query Frame = 0 

Query: 155 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 214
           Y P  F +N ++  + R  +   A  L D M  +    D  TY  ++    K G  D AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 215 SWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGITPDIVAYNSMINVF 274
           S L+KMEQ ++   +V+Y+ +I+     ++ + A+++F+ +   GI P++V YNS+I   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 275 GKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDL 334
                + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +   D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 335 TTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
            T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + LFR 
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 395 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGK 454
           M ++ +  N VTY T+I  + ++ E + A  + ++M + G+ P+ +TYS ++      GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 455 LERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----HPDNIPRKT 514
           +E A ++F+ L+ S  E D   Y  MI    KAG V     L   L      P+ +   T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 515 AITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRNVG 574
            ++   + G  EEA  +FR+  E G L D   +  +I    R+       E+  +MR+  
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601

Query: 575 HFPNSNVIALVLN 584
              +++ I LV N
Sbjct: 602 FVGDASTIGLVTN 614

[Close]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1254.2 bits (3244), Expect = 0.0e+00
Identity = 642/679 (94.55%), Postives = 658/679 (96.91%), Query Frame = 0 

Query: 1   MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWR 60
           MGFSSIQLQS  SFSS IP FLIETR++PK RFNKIKTKPRT IPI RASS   SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120
           RKTPSEKSTTT  PQKYQR+ARRQRESSHLDHS+DMDELLASIG+TKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180
           GRQLSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 300
           KL DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360
           SYSTLL++FVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW M
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 480
           EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 540
           IVAYEKAGLVAHAKRLLHELK PDNIPRKTAITILAKAGRIEEATW+FRQAF+AGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 600
           SVFGCMIDLFSRNKKHKNVVEVFEKMR+VGHFPNSNVIALVLNAYGKLRDFD ADAVYME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 660
           MQE+ C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NR
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

Query: 661 LNDASRIMNRMNEMTISRS 680
           LN+ASRIMNRMNE  ISRS
Sbjct: 661 LNNASRIMNRMNETAISRS 679

[Close]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1254.2 bits (3244), Expect = 0.0e+00
Identity = 642/679 (94.55%), Postives = 658/679 (96.91%), Query Frame = 0 

Query: 1   MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWR 60
           MGFSSIQLQS  SFSS IP FLIETR++PK RFNKIKTKPRT IPI RASS   SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120
           RKTPSEKSTTT  PQKYQR+ARRQRESSHLDHS+DMDELLASIG+TKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180
           GRQLSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 300
           KL DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360
           SYSTLL++FVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW M
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 480
           EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 540
           IVAYEKAGLVAHAKRLLHELK PDNIPRKTAITILAKAGRIEEATW+FRQAF+AGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 600
           SVFGCMIDLFSRNKKHKNVVEVFEKMR+VGHFPNSNVIALVLNAYGKLRDFD ADAVYME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 660
           MQE+ C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NR
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

Query: 661 LNDASRIMNRMNEMTISRS 680
           LN+ASRIMNRMNE  ISRS
Sbjct: 661 LNNASRIMNRMNETAISRS 679

[Close]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 630/676 (93.20%), Postives = 654/676 (96.75%), Query Frame = 0 

Query: 4   SSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKT 63
           SS+QLQS SSFSS +   LIETRN+ K   ++ K+KPR  I I RASS  TSKDIWRRKT
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQ 123
            SEKSTTTPFPQKY+R+ARRQRESSHLDHSVDMDELLASIG+TKNEQELYS+LSPYKGRQ
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLR 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNLIELSRKL 
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 363
           TLLS+FVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 483
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVF 543
           YE+AGLVAHAKRL+ ELK PDNIPRKTAITILA+AGR+EEATW+FRQAF+AGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 GCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 603
           GCMIDLFSRNKKHKNVVEVFEKMR+VGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 ECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 663
           E CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLND
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLND 668

Query: 664 ASRIMNRMNEMTISRS 680
           ASRIMNRMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 628/676 (92.90%), Postives = 653/676 (96.60%), Query Frame = 0 

Query: 4   SSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWRRKT 63
           SS+QLQS SSFSS +   L ETRN+ K   ++ K+KPR  I I RASS  TSKDIWRRKT
Sbjct: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYKGRQ 123
           PSEKSTTTPFPQKY+R+ARRQRESSHLDHSVDMDELLASIG+TKNEQELYS+LSPYKGRQ
Sbjct: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLR 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL 
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 363
           TLLS+FVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVA 483
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVF 543
           YE+AGLVAHAKRL+ ELK PDNIPRKTAITILA+AGR+EEATW+FRQAF+AGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 GCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQE 603
           GCMIDLFSRNK+HKNVVEVFEKMR+VGHFP+SNVIALVLNAYGKLRDFDKADAVYMEMQE
Sbjct: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 ECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 663
           + CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IYERANRLND
Sbjct: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLND 668

Query: 664 ASRIMNRMNEMTISRS 680
           ASRIMNRMNEM+ISRS
Sbjct: 669 ASRIMNRMNEMSISRS 684

[Close]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match: A0A0A0LCU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827400 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 621/679 (91.46%), Postives = 647/679 (95.29%), Query Frame = 0 

Query: 1   MGFSSIQLQSPSSFSSLIPFFLIETRNHPKFRFNKIKTKPRTLIPILRASSFPTSKDIWR 60
           MGFSSIQLQS SS SS IP FLIETRN+PK RFNKIK KPRT IPI  ASS  TSKDIWR
Sbjct: 1   MGFSSIQLQSTSSLSSSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTASSSSTSKDIWR 60

Query: 61  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120
           R+TPSEKSTTT  PQKYQR+ RR RESSHLDHS+DMDELLASIG+TKNEQELYSVLSPYK
Sbjct: 61  RQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180
           GR+LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 300
           KL DYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAVDV+PDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360
           SYSTLL++FVENEKFLEALSV SEM EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW M
Sbjct: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420
           RK+GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEH
Sbjct: 361 RKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420

Query: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 480
           EKATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKL+R+AMLFQKLRSSGAEIDQVLYQTM
Sbjct: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 540
           IVAYEKAGLV HAKRLLHELK PDNIPR TAITILAKAGRIEEATW+FRQAF+AGELKDI
Sbjct: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 600
           SVF CMIDLFSRNKKHKNV+EVFEKMRNVGHFPNS+VIALVLNAYGKLRDFD ADA+YME
Sbjct: 541 SVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYME 600

Query: 601 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 660
           MQEE CVF DEVHFQMLSLYGAR DYKRLESLFERLDSDPNINKKELHLVVASIYER NR
Sbjct: 601 MQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

Query: 661 LNDASRIMNRMNEMTISRS 680
             DASRI+NRMN++ ISRS
Sbjct: 661 SKDASRIINRMNKIAISRS 679

[Close]
BLAST of CcUC10G200070 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1007.7 bits (2604), Expect = 4.5e-294
Identity = 520/676 (76.92%), Postives = 597/676 (88.31%), Query Frame = 0 

Query: 6   IQLQSPSSFS-SLIPFFLIETRNHPKFRFNKI-KTKPRTLIPILRASSFPTS---KDIWR 65
           I++ S SS S  L+P  L     +    F+ I + + R LI  + ASS   S   K +WR
Sbjct: 3   IEIASSSSLSLPLLP--LTRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVWR 62

Query: 66  RKTPSEKSTTTPFPQKYQRNARRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 125
           ++   EK+TT+ F  +  R  RR + S+ LDH+VDMDELLASI +T+NE+EL+S+LS YK
Sbjct: 63  KQ--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYK 122

Query: 126 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 185
            RQLS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++AHG
Sbjct: 123 DRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHG 182

Query: 186 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 245
           LFDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 183 LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSR 242

Query: 246 KLRDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTV 305
           +L DYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TV
Sbjct: 243 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 302

Query: 306 SYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 365
           SYSTLLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+
Sbjct: 303 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 362

Query: 366 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 425
           RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EH
Sbjct: 363 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 422

Query: 426 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTM 485
           EKATNLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTM
Sbjct: 423 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 482

Query: 486 IVAYEKAGLVAHAKRLLHELKHPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDI 545
           IVAYE+ GL+ HAKRLLHELK PDNIPR+TAITILAKAGR EEATW+FRQAFE+GE+KDI
Sbjct: 483 IVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 542

Query: 546 SVFGCMIDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYME 605
           SVFGCMI+L+SRN+++ NV+EVFEKMR  G+FP+SNVIA+VLNAYGK R+F+KAD VY E
Sbjct: 543 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 602

Query: 606 MQEECCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANR 665
           MQEE CVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++
Sbjct: 603 MQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADK 662

Query: 666 LNDASRIMNRMNEMTI 677
           LNDASR+MNRM E  I
Sbjct: 663 LNDASRVMNRMRERGI 672

[Close]
BLAST of CcUC10G200070 vs. TAIR 10
Match: AT3G23020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-54
Identity = 151/613 (24.63%), Postives = 285/613 (46.49%), Query Frame = 0 

Query: 110 QELYSVLSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 169
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 170 LRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 229
            +A +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 230 VLYSNLIELSRKLRDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 289
           V    ++++ +K R++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 290 RFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 349
               K M    +VP TV+++T++ I+  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 350 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 409
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 410 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 469
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 470 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLV 529
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 530 AHAKRLLHELKH----PDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVFGCM 589
              +  L +++      D IP    I+   K G++  A  ++++  E     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 590 IDLFSRNKKHKNVVEVFEKMRNVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEC- 649
           I+ F+     +  +   E M+  G   NS +   ++  Y K+   D+A+A+Y ++ + C 
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 650 -CVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 677
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]
BLAST of CcUC10G200070 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-53
Identity = 134/451 (29.71%), Postives = 236/451 (52.33%), Query Frame = 0 

Query: 155 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 214
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 215 SWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGITPDIVAYNSMINVF 274
           S L+KME+ ++  D+V+Y+ +I+     ++ + A+++F+ +   GI P++V YNS+I   
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 275 GKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDL 334
                + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +   D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 335 TTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
            T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + LFR 
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 395 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGK 454
           M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 455 LERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----HPDNIPRKT 514
           LE+A ++F+ L+ S  E D   Y  MI    KAG V     L   L      P+ I   T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 515 AITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRNVG 574
            I+   + G  EEA  +FR+  E G L +   +  +I    R+       E+ ++MR+ G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 575 HFPNSNVIALVLNAYGKLRDFDKADAVYMEM 602
              +++ I++V+N    L D  + +  Y+EM
Sbjct: 601 FVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]
BLAST of CcUC10G200070 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 5.0e-51
Identity = 128/446 (28.70%), Postives = 231/446 (51.79%), Query Frame = 0 

Query: 142 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 201
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 202 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGIT 261
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K +    A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 262 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSV 321
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 322 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 381
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 382 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 441
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 442 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK 501
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    KAG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 502 ----HPDNIPRKTAITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHK 561
                P+ I   T I+   + G  EEA  + ++  E G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 562 NVVEVFEKMRNVGHFPNSNVIALVLN 584
              E+ ++MR+ G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of CcUC10G200070 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-49
Identity = 125/433 (28.87%), Postives = 219/433 (50.58%), Query Frame = 0 

Query: 155 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 214
           Y P  F +N ++  + R  +   A  L D M  +    D  TY  ++    K G  D AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 215 SWLQKMEQDRVSGDLVLYSNLIELSRKLRDYSKAISIFSRLKRSGITPDIVAYNSMINVF 274
           S L+KMEQ ++   +V+Y+ +I+     ++ + A+++F+ +   GI P++V YNS+I   
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 275 GKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSIFVENEKFLEALSVFSEMTEVNCPLDL 334
                + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +   D+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 335 TTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
            T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + LFR 
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 395 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGK 454
           M ++ +  N VTY T+I  + ++ E + A  + ++M + G+ P+ +TYS ++      GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 455 LERAAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK----HPDNIPRKT 514
           +E A ++F+ L+ S  E D   Y  MI    KAG V     L   L      P+ +   T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 515 AITILAKAGRIEEATWIFRQAFEAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRNVG 574
            ++   + G  EEA  +FR+  E G L D   +  +I    R+       E+  +MR+  
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601

Query: 575 HFPNSNVIALVLN 584
              +++ I LV N
Sbjct: 602 FVGDASTIGLVTN 614

The following BLAST results are available for this feature:
BLAST of CcUC10G200070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443439.10.0e+0094.55PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic ... [more]
XP_038903074.10.0e+0094.40pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Benincasa ... [more]
XP_023521621.10.0e+0093.05pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur... [more]
XP_022934402.10.0e+0093.20pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
XP_022983728.10.0e+0092.90pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
BLAST of CcUC10G200070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLD86.4e-29376.92Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... [more]
Q9LS882.3e-5324.63Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX... [more]
Q9LQ142.6e-5229.71Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Q9LQ167.0e-5028.70Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Q9CAN01.7e-4828.87Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
BLAST of CcUC10G200070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UGV70.0e+0094.55Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B8T90.0e+0094.55pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ... [more]
A0A6J1F2M90.0e+0093.20pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A6J1J8J40.0e+0092.90pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A0A0LCU40.0e+0091.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827400 PE=4 SV=1[more]
BLAST of CcUC10G200070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39980.14.5e-29476.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G23020.11.7e-5424.63Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62930.11.8e-5329.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62910.15.0e-5128.70Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63130.11.2e-4928.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 265..299
e-value: 1.6E-7
score: 29.1
coord: 405..439
e-value: 3.3E-8
score: 31.2
coord: 440..473
e-value: 1.1E-4
score: 20.1
coord: 300..333
e-value: 3.3E-5
score: 21.8
coord: 542..574
e-value: 2.8E-4
score: 18.9
coord: 581..610
e-value: 6.5E-6
score: 24.0
coord: 336..369
e-value: 2.9E-7
score: 28.2
coord: 370..403
e-value: 3.7E-6
score: 24.8
coord: 161..188
e-value: 0.001
score: 17.1
coord: 195..227
e-value: 2.6E-6
score: 25.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 157..202
e-value: 1.4E-10
score: 41.2
coord: 403..446
e-value: 1.3E-14
score: 54.1
coord: 333..376
e-value: 2.6E-10
score: 40.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 542..570
e-value: 0.0028
score: 17.8
coord: 581..606
e-value: 0.007
score: 16.5
coord: 475..501
e-value: 0.12
score: 12.7
coord: 300..330
e-value: 1.2E-4
score: 22.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 217..276
e-value: 1.3E-10
score: 41.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 473..507
score: 8.560833
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..262
score: 9.733692
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 539..573
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..227
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 10.215989
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..332
score: 10.128299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 158..192
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 10.215989
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 104..238
e-value: 4.5E-24
score: 86.8
coord: 388..493
e-value: 1.3E-27
score: 98.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 502..678
e-value: 1.1E-20
score: 76.3
coord: 239..387
e-value: 6.1E-39
score: 136.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..91
NoneNo IPR availablePANTHERPTHR47447:SF7PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTICcoord: 9..675
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 9..675

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G200070.1CcUC10G200070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding