
CcUC10G195840 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGAAAGAGGAAAAGCAAAAGCAAGGTCTGGAGGACTGAAGGGAAATGGGGGAAAACGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAATATTCGGCGATTCTTCGGAAGACGAATGCTTCGAAGATCAAACTGTAATGAATGATTCATCATATGAAGTGGGTCACATTCGTAAATGGGAGCAGGTCAAGGAAATCAAAGGCTTGTGGCTCTGCAGAATCTTCATCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATCCGAAATGGTTCGTAATTTCTATCTCTTTCCGTAGCATGAAACTCATCTGTTTTCGAATTTGATCCCTGAACTTGAGATTTCAATATGTTTAGCTTACCCTCTTTATGAGATTGCAGATACTTGAATCATGTTTGGAAATTTCATAAAACTGTGCCCATAAAGTTATGCTAACCTTATACTGTTATGTTTTCAGAAGGGTGGTTCATGGACGCCTCTCAAAATCAGGTACCTTCAATTTTAATCTTGATAAGCTTATTAGGGATCTATTATATCTATTGTTATGCCTAGAGATCAATTCTTCACTGTCACCGAGCAAGCACTGAGGATTTTAAACGCTGTATTGTTGTTGGATTTTGTTCTTGAAGTTTAGACTTGAATAATATTCTTAACTACTGTTACTTTTTCTATTCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCTGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGACTATGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGATATTTTGTGGAGGGAACCACTTTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGTGCGATGGCGACCCATTTCCATTCTATTGATTGACATCTTTTTGAATCGAACTTCTAGGACGATAGCTTCGCAGGCACTAGGGGCTGTTTAGAAACAGTTTTTTTGATGTAGAACTAGAACATCTTTTGTTATAGTAGAATGTAGTTTAAGAGTCAGTTTGCAAAACAGTTCCTGAAAACTGAATTTGGAGAATAACCCTGTAGCCACTAAGAATCCAAGATTGTGATGTTTGGTCTGTCAAGATAAAGGATGTACTTTAACAAGGAATAGAATCAGTTTTGTATTTTGATTTTTCATTTGAGAGTTCAACAATATGTGGGAGTTAGTGCGGGGGAATTTAAACTCTTAGTTGAGGGCGTATGCTTAGTTGAGTTGTGTTGTTGACAAAAAGAAAGAGTTTCTTGTGCTGTAGTATTTTGATCCATTCTTTTCATGTCTATTTTATGAATTCTGTTTATAATATTTCCCTTGGATTATCTGATCAAGTTGTCCACACTTCAACTGCAATCGTGATTGGATACGAGGCCTTAATATTCTGCTAATCTGACAAAGATGATTTGTGAATGGCATGTATAAAGCACTCTGGGCCATATTGTTTGAGAAAATTTATATCTGACATTGTTTGCCTTTTATTTATCTTCATTAGCAACTGCAACTGCTTTCCATTTCTTCTTTTAGCTTTCCTCATTAGTCATTGATTCAGTGACATTGTTATAGCTTACCTCTATTATTCTTTATAAAGGGAATCTGTGCACATGTTGACCTAATGCGTTTCGAAGATGGAATTGCGATTGTCTCCCTCGAGTCGCCATGCGTGATGCATTTTACCCGAGTTTATGAAACTTCCTATGATCCTTCAATCAAGGGAGAAGTCGATTTATTGGCATCAAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGTGAAGCCCGCTACCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGGCAGGAACTTAGTCAGGAGAGGAGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAGGAAGTTCACTGATGGGAGCTGCATTTTGTTCCATGTTCATGCTTTATTGTGTTCAACTGAATGAACCATTGGCTGTTATTTGGCTAGGATATCTTCAAGTCACTGTTCTAGATCTTGAAAAGGAGAAATTAGACAAGGATGCTCATATTTCTATACATGGCGCAGTTCCATGATTGATAAAAGAATATGAAGAGGTTCCAACCAGTTGAATAAAAATCTGACATTAGTATAAACAACTTGGTTCCATCTTCCCAGTGAGAGGGGAAAATTGACAAGGAGAAGGGAATGGAGGTGAGAGATCTGAAGAGAAAGGAGAAGGATGGTAAAGTGAATCAAGAACGTATAACTTGTTACTTTTTTTAATAAATATTACTATTATTTTATGTGAGGTCGTTAGAACATGGATGAAGATTGAATTATTTGAGATTTATAATCTCCTTTTAGCTAATGGAGCAATCATCATGTTATAAGTTTTACATTTTACTATAGACTAAAAAATTTGATTGCGTGTTTTGTTTCTATTTTCACTAAGATTTATGGTGAAAATTGATAATCTTACGAAGGTTTAGGAGTTTAATCGATAAAATTAAGTCTTATACAGTATTTTTTCATATAACATGTAACGAAGGATGTAAATTGATACATTTAGAAATATTCTGAATTTAAATTGATACAAGTAATATTTTTTTTTAATAATATGATTAGATGTTGG ATAAGAAAGAGGAAAAGCAAAAGCAAGGTCTGGAGGACTGAAGGGAAATGGGGGAAAACGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAATATTCGGCGATTCTTCGGAAGACGAATGCTTCGAAGATCAAACTGTAATGAATGATTCATCATATGAAGTGGGTCACATTCGTAAATGGGAGCAGGTCAAGGAAATCAAAGGCTTGTGGCTCTGCAGAATCTTCATCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATCCGAAATGAAGGGTGGTTCATGGACGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCTGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGACTATGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGATATTTTGTGGAGGGAACCACTTTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGGAATCTGTGCACATGTTGACCTAATGCGTTTCGAAGATGGAATTGCGATTGTCTCCCTCGAGTCGCCATGCGTGATGCATTTTACCCGAGTTTATGAAACTTCCTATGATCCTTCAATCAAGGGAGAAGTCGATTTATTGGCATCAAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGTGAAGCCCGCTACCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGGCAGGAACTTAGTCAGGAGAGGAGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAGGAAGTTCACTGATGGGAGCTGCATTTTGTTCCATGTTCATGCTTTATTGTGTTCAACTGAATGAACCATTGGCTGTTATTTGGCTAGGATATCTTCAAGTCACTGTTCTAGATCTTGAAAAGGAGAAATTAGACAAGGATGCTCATATTTCTATACATGGCGCAGTTCCATGATTGATAAAAGAATATGAAGAGGTTCCAACCAGTTGAATAAAAATCTGACATTAGTATAAACAACTTGGTTCCATCTTCCCAGTGAGAGGGGAAAATTGACAAGGAGAAGGGAATGGAGGTGAGAGATCTGAAGAGAAAGGAGAAGGATGGTAAAGTGAATCAAGAACGTATAACTTGTTACTTTTTTTAATAAATATTACTATTATTTTATGTGAGGTCGTTAGAACATGGATGAAGATTGAATTATTTGAGATTTATAATCTCCTTTTAGCTAATGGAGCAATCATCATGTTATAAGTTTTACATTTTACTATAGACTAAAAAATTTGATTGCGTGTTTTGTTTCTATTTTCACTAAGATTTATGGTGAAAATTGATAATCTTACGAAGGTTTAGGAGTTTAATCGATAAAATTAAGTCTTATACAGTATTTTTTCATATAACATGTAACGAAGGATGTAAATTGATACATTTAGAAATATTCTGAATTTAAATTGATACAAGTAATATTTTTTTTTAATAATATGATTAGATGTTGG ATGGGGGAAAACGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAATATTCGGCGATTCTTCGGAAGACGAATGCTTCGAAGATCAAACTGTAATGAATGATTCATCATATGAAGTGGGTCACATTCGTAAATGGGAGCAGGTCAAGGAAATCAAAGGCTTGTGGCTCTGCAGAATCTTCATCTCTCCCCAACAACAATCATCGCTTCTCTCCGCAATCCGAAATGAAGGGTGGTTCATGGACGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCTGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGACTATGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGATATTTTGTGGAGGGAACCACTTTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGGAATCTGTGCACATGTTGACCTAATGCGTTTCGAAGATGGAATTGCGATTGTCTCCCTCGAGTCGCCATGCGTGATGCATTTTACCCGAGTTTATGAAACTTCCTATGATCCTTCAATCAAGGGAGAAGTCGATTTATTGGCATCAAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGTGAAGCCCGCTACCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGGCAGGAACTTAGTCAGGAGAGGAGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAG MGENEKLDDEDEILKQIFGDSSEDECFEDQTVMNDSSYEVGHIRKWEQVKEIKGLWLCRIFISPQQQSSLLSAIRNEGWFMDASQNQAMRFGNLPTWAVELSDSVYEAVLSSNHMTDTLTMDRYNGDKVDCPLPSDILWREPLFDQMIANVYQPGEGICAHVDLMRFEDGIAIVSLESPCVMHFTRVYETSYDPSIKGEVDLLASKVPVYLNPGSLVILWGEARYLWKHEINRKPGFQIWEGQELSQERRTSITLRKLCHVE Homology
BLAST of CcUC10G195840 vs. NCBI nr
Match: XP_038905579.1 (uncharacterized protein LOC120091559 [Benincasa hispida]) HSP 1 Score: 500.4 bits (1287), Expect = 9.7e-138 Identity = 238/258 (92.25%), Postives = 249/258 (96.51%), Query Frame = 0
BLAST of CcUC10G195840 vs. NCBI nr
Match: XP_004152257.1 (uncharacterized protein LOC101207942 [Cucumis sativus]) HSP 1 Score: 487.6 bits (1254), Expect = 6.5e-134 Identity = 232/258 (89.92%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of CcUC10G195840 vs. NCBI nr
Match: XP_008454361.1 (PREDICTED: uncharacterized protein LOC103494783 [Cucumis melo] >KAA0044368.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa] >TYK29496.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 472.6 bits (1215), Expect = 2.2e-129 Identity = 228/258 (88.37%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of CcUC10G195840 vs. NCBI nr
Match: XP_022998149.1 (uncharacterized protein LOC111492881 [Cucurbita maxima]) HSP 1 Score: 464.2 bits (1193), Expect = 7.7e-127 Identity = 218/258 (84.50%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of CcUC10G195840 vs. NCBI nr
Match: XP_022948590.1 (uncharacterized protein LOC111452220 [Cucurbita moschata]) HSP 1 Score: 462.2 bits (1188), Expect = 2.9e-126 Identity = 217/258 (84.11%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy Swiss-Prot
Match: Q5UR03 (Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L905 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.7e-13 Identity = 57/215 (26.51%), Postives = 100/215 (46.51%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy Swiss-Prot
Match: Q9UT12 (Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP8A3.02c PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12 Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy Swiss-Prot
Match: Q8RWY1 (Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=ALKBH8 PE=2 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 3.8e-12 Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy Swiss-Prot
Match: Q07G10 (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis OX=8364 GN=alkbh8 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11 Identity = 68/239 (28.45%), Postives = 99/239 (41.42%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy Swiss-Prot
Match: Q95K79 (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis OX=9541 GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09 Identity = 47/130 (36.15%), Postives = 61/130 (46.92%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy TrEMBL
Match: A0A0A0KV56 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001660 PE=4 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 3.1e-134 Identity = 232/258 (89.92%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy TrEMBL
Match: A0A5A7TNC5 (Alkylated DNA repair protein alkB-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00950 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129 Identity = 228/258 (88.37%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy TrEMBL
Match: A0A1S3BYI6 (uncharacterized protein LOC103494783 OS=Cucumis melo OX=3656 GN=LOC103494783 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129 Identity = 228/258 (88.37%), Postives = 238/258 (92.25%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy TrEMBL
Match: A0A6J1KDK2 (uncharacterized protein LOC111492881 OS=Cucurbita maxima OX=3661 GN=LOC111492881 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 3.7e-127 Identity = 218/258 (84.50%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of CcUC10G195840 vs. ExPASy TrEMBL
Match: A0A6J1GAA7 (uncharacterized protein LOC111452220 OS=Cucurbita moschata OX=3662 GN=LOC111452220 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126 Identity = 217/258 (84.11%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of CcUC10G195840 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-71 Identity = 141/255 (55.29%), Postives = 173/255 (67.84%), Query Frame = 0
BLAST of CcUC10G195840 vs. TAIR 10
Match: AT1G31600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 0
BLAST of CcUC10G195840 vs. TAIR 10
Match: AT1G31600.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 0
BLAST of CcUC10G195840 vs. TAIR 10
Match: AT1G31600.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13 Identity = 59/227 (25.99%), Postives = 94/227 (41.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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