CcUC10G195820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G195820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein RALF-like 33
Location	CicolChr10: 21497208 .. 21497588 (-)
RNA-Seq Expression	CcUC10G195820
Synteny	CcUC10G195820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTAAAGGCAACTATGGGTAACTCTTCTTCTCCACCTACCTTATGTACGCTCATTTTCACCATTGCTTTCTTCGTCTCTTCGTCCTCTATAACGGTCACGGCAATGAGTAGCGACCATAGTCTTAGTTGGCTCTCGACCGAAACTCGATGCCATGGACGTTCAATAAGTGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAGGGCCAACAACATTCCATGCTCTCGGAGAGGTGCGTCCTACTACAATTGTCAACCTGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGTACTGCCATTACTCGTTGTAGAAGCTAA

mRNA sequence

ATGAAGCTAAAGGCAACTATGGGTAACTCTTCTTCTCCACCTACCTTATGTACGCTCATTTTCACCATTGCTTTCTTCGTCTCTTCGTCCTCTATAACGGTCACGGCAATGAGTAGCGACCATAGTCTTAGTTGGCTCTCGACCGAAACTCGATGCCATGGACGTTCAATAAGTGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAGGGCCAACAACATTCCATGCTCTCGGAGAGGTGCGTCCTACTACAATTGTCAACCTGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGTACTGCCATTACTCGTTGTAGAAGCTAA

Coding sequence (CDS)

ATGAAGCTAAAGGCAACTATGGGTAACTCTTCTTCTCCACCTACCTTATGTACGCTCATTTTCACCATTGCTTTCTTCGTCTCTTCGTCCTCTATAACGGTCACGGCAATGAGTAGCGACCATAGTCTTAGTTGGCTCTCGACCGAAACTCGATGCCATGGACGTTCAATAAGTGAATGCATGATGAACATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAGGGCCAACAACATTCCATGCTCTCGGAGAGGTGCGTCCTACTACAATTGTCAACCTGGGGCCGAAGCTAACCCGTATCAGCGAGGTTGTACTGCCATTACTCGTTGTAGAAGCTAA

Protein sequence

MKLKATMGNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS

Homology

[Close]

BLAST of CcUC10G195820 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 107/120 (89.17%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIEF 66
           MGNSSSPP    LIFTIA FVSSSS+ VTAMSSD SL+WLSTE RCHGRSISECMM IEF
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIEF 60

Query: 67  EMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS 126
           EMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCTAITRCRS
Sbjct: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120

[Close]

BLAST of CcUC10G195820 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_014956 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 9.6e-51
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFV--SSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNI 66
           MG+SSSPP L  LIFTIAFFV  SSSS+ VT MSSD SL+WLSTE RCHGRSISECMM+I
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 67  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRC 126
           EFEMDSEINRRILATSSYISYKSLRANNIPCSRRG+SYYNCQPGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

[Close]

BLAST of CcUC10G195820 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.8 bits (530), Expect = 2.8e-50
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 7   MGNSSSPPTLCT-LIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIE 66
           MGNSSSPP   + LIFTIAFFV SSS+ V AMS DHSLSWLSTE RCHGRS+SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVYSSSLMVMAMSGDHSLSWLSTEARCHGRSLSECMMNVE 60

Query: 67  FEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCR 126
           FEMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of CcUC10G195820 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 104/121 (85.95%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 7   MGNSSSPPTLCT-LIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIE 66
           MGNSSSPP   + LIFTIAFFVSSSS+ V AMS D SLSWLSTE RCHGRS+SECMM++E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDVE 60

Query: 67  FEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCR 126
           FEMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of CcUC10G195820 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 104/121 (85.95%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 7   MGNSSSPPTLCT-LIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIE 66
           MGNSSSPP   + LIFTIAFFVSSSS+ V AMS D SLSWLSTE RCHGR +SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNVE 60

Query: 67  FEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCR 126
           FEMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-26
Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 8   GNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNI--- 67
           G S+ P  +   I T+ F  +       A++S  S  ++  E++C+G +I+EC ++    
Sbjct: 3   GLSTKPVAIIIAILTVHFLFA-------AVTSQSSGDFVPIESKCNG-TIAECSLSTAEE 62

Query: 68  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRC 126
           EFEMDSEINRRILAT+ YISY +LR N +PCSRRGASYYNC+ GA+ANPY RGC+AITRC
Sbjct: 63  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-25
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 18  TLIFTIAFFVSSSSITVTAMSSDHSLSWLST---ETRCHGRSISECMMNIEFEMDSEINR 77
           TL   + F +SS  +     +    ++W +T    + CHG SI+EC+   E EMDSEINR
Sbjct: 10  TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSEINR 69

Query: 78  RILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS 127
           RILAT+ YISY+SL+ N++PCSRRGASYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 70  RILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-23
Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 16  LCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETR---CHGRSISECMM-NIEFEMDSE 75
           LC LI   AFF+S     + A     +  W+        C G SI EC+    EFE+DSE
Sbjct: 9   LCVLIG--AFFIS-----MAAAGDSGAYDWVMPARSGGGCKG-SIGECIAEEEEFELDSE 68

Query: 76  INRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS 127
            NRRILAT  YISY +L+ N++PCSRRGASYYNC+PGA+ANPY RGC+AITRCRS
Sbjct: 69  SNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.8e-23
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECM----- 66
           +  +S    +  ++  +A  V + S+ V++ S++ +  +   ET C G +I+EC      
Sbjct: 4   LSRNSGAAAIFAILLILA--VHNWSVAVSSQSTEFAGDFPPFETECRG-TIAECSVSAAL 63

Query: 67  ------------MNIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGA 126
                       M  EFEMDSEINRRILAT  YISY +LR N IPCSRRGASYYNC+ GA
Sbjct: 64  GDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGA 123

[Close]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 52  CHGRSISECMM-NIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAE 111
           C G SI+EC+    E E DS+I+RRILA   YISY ++R N++PCSRRGASYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 112 ANPYQRGCTAITRCR 126
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.2e-52
Identity = 107/120 (89.17%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIEF 66
           MGNSSSPP    LIFTIA FVSSSS+ VTAMSSD SL+WLSTE RCHGRSISECMM IEF
Sbjct: 1   MGNSSSPPAFTILIFTIAVFVSSSSLAVTAMSSDQSLNWLSTEVRCHGRSISECMMKIEF 60

Query: 67  EMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS 126
           EMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCTAITRCRS
Sbjct: 61  EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.7e-51
Identity = 108/122 (88.52%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFV--SSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNI 66
           MG+SSSPP L  LIFTIAFFV  SSSS+ VT MSSD SL+WLSTE RCHGRSISECMM+I
Sbjct: 1   MGSSSSPPALSILIFTIAFFVSSSSSSLVVTTMSSDRSLNWLSTEARCHGRSISECMMHI 60

Query: 67  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRC 126
           EFEMDSEINRRILATSSYISYKSLRANNIPCSRRG+SYYNCQPGAEANPYQRGCTAITRC
Sbjct: 61  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRC 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 104/121 (85.95%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 7   MGNSSSPPTLCT-LIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIE 66
           MGNSSSPP   + LIFTIAFFVSSSS+ V AMS D SLSWLSTE RCHGRS+SECMM++E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDVE 60

Query: 67  FEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCR 126
           FEMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 104/121 (85.95%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 7   MGNSSSPPTLCT-LIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNIE 66
           MGNSSSPP   + LIFTIAFFVSSSS+ V AMS D SLSWLSTE RCHGR +SECMMN+E
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNVE 60

Query: 67  FEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCR 126
           FEMDSEINRRILATSSYISYKSL+ANNIPCSRRG+SYYNCQPGAEANPYQRGCT ITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

[Close]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL
Match: A0A6J5XM33 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29
Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFVSSSSITVTAMS----SDHSLSWLSTETRCHGRSISECMM 66
           M NSSS       IF  AF++ ++++ ++  +     DH LSW+ + TRC G SI+ECM 
Sbjct: 1   MANSSS-------IFLFAFYMFTATLIISTWTVHAGGDHGLSWVPSRTRCQG-SIAECMA 60

Query: 67  NIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAIT 126
           + EF+MDSEINRRILATS YISY +L+ N +PCSRRGASYYNC+PGAE+NPY RGC+AI 
Sbjct: 61  DDEFDMDSEINRRILATSQYISYGALQRNTVPCSRRGASYYNCKPGAESNPYNRGCSAIA 116

[Close]

BLAST of CcUC10G195820 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 117.9 bits (294), Expect = 6.1e-27
Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 8   GNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECMMNI--- 67
           G S+ P  +   I T+ F  +       A++S  S  ++  E++C+G +I+EC ++    
Sbjct: 3   GLSTKPVAIIIAILTVHFLFA-------AVTSQSSGDFVPIESKCNG-TIAECSLSTAEE 62

Query: 68  EFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRC 126
           EFEMDSEINRRILAT+ YISY +LR N +PCSRRGASYYNC+ GA+ANPY RGC+AITRC
Sbjct: 63  EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRC 115

[Close]

BLAST of CcUC10G195820 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 18  TLIFTIAFFVSSSSITVTAMSSDHSLSWLST---ETRCHGRSISECMMNIEFEMDSEINR 77
           TL   + F +SS  +     +    ++W +T    + CHG SI+EC+   E EMDSEINR
Sbjct: 10  TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHG-SIAECIGAEEEEMDSEINR 69

Query: 78  RILATSSYISYKSLRANNIPCSRRGASYYNCQPGAEANPYQRGCTAITRCRS 127
           RILAT+ YISY+SL+ N++PCSRRGASYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 70  RILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of CcUC10G195820 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-24
Identity = 64/136 (47.06%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 7   MGNSSSPPTLCTLIFTIAFFVSSSSITVTAMSSDHSLSWLSTETRCHGRSISECM----- 66
           +  +S    +  ++  +A  V + S+ V++ S++ +  +   ET C G +I+EC      
Sbjct: 4   LSRNSGAAAIFAILLILA--VHNWSVAVSSQSTEFAGDFPPFETECRG-TIAECSVSAAL 63

Query: 67  ------------MNIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGA 126
                       M  EFEMDSEINRRILAT  YISY +LR N IPCSRRGASYYNC+ GA
Sbjct: 64  GDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGA 123

[Close]

BLAST of CcUC10G195820 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 0


Query: 52  CHGRSISECMM-NIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGASYYNCQPGAE 111
           C G SI+EC+    E E DS+I+RRILA   YISY ++R N++PCSRRGASYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 112 ANPYQRGCTAITRCR 126
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of CcUC10G195820 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 32  ITVTAMSSDHSLSWLSTETRCHGRSISECMMNIEFEMDSEINRRILAT-SSYISYKSLRA 91
           +T+  ++   + +W  T++  +G+        +++ MDSE NRR LA   SYISY +LR 
Sbjct: 12  LTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRK 71

Query: 92  NNIPCSRRGASYYNCQPGAEANPYQRGCTAITRC 125
           NN+PCSRRG SYY+C+    ANPY+RGC+ IT C
Sbjct: 72  NNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of CcUC10G195820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044366.1	1.5e-51	89.17	protein RALF-like 33 [Cucumis melo var. makuwa]	[more]
KGN52797.1	9.6e-51	88.52	hypothetical protein Csa_014956 [Cucumis sativus]	[more]
XP_023529110.1	2.8e-50	86.78	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
XP_022934551.1	1.4e-49	85.95	protein RALF-like 1 [Cucurbita moschata]	[more]
XP_022983404.1	2.4e-49	85.95	protein RALF-like 1 [Cucurbita maxima]	[more]

BLAST of CcUC10G195820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	8.5e-26	52.89	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	1.9e-25	55.36	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	2.3e-23	55.65	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	6.8e-23	47.06	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	1.4e-20	65.33	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CcUC10G195820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQI0	7.2e-52	89.17	Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G...	[more]
A0A0A0KWI2	4.7e-51	88.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1	[more]
A0A6J1F244	6.7e-50	85.95	protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1	[more]
A0A6J1J798	1.1e-49	85.95	protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1	[more]
A0A6J5XM33	1.3e-29	58.06	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 S...	[more]

BLAST of CcUC10G195820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	6.1e-27	52.89	ralf-like 33	[more]
AT1G02900.1	1.4e-26	55.36	rapid alkalinization factor 1	[more]
AT3G16570.1	4.8e-24	47.06	rapid alkalinization factor 23	[more]
AT3G05490.1	1.0e-21	65.33	ralf-like 22	[more]
AT2G33775.1	1.7e-16	44.68	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 65..125 e-value: 2.5E-28 score: 98.8
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 16..126
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 16..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G195820.1	CcUC10G195820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane