CcUC10G187800 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187800
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein, chloroplastic
Location	CicolChr10: 1796984 .. 1799119 (+)
RNA-Seq Expression	CcUC10G187800
Synteny	CcUC10G187800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTCCTCTTTCTTCCTCTCTCGATCTCAATCTCAAACCAACCCCCATCTTCTTCACTTCCCCTCTCCCCCGGAACAGTTTCACCAAACGATTAACAGTCCTCTGTTCCTCCTCCTCCAAATCCCCTAGAAGAGCTTCTCCAATTTCATCAGAATCGACCGACAACAAAAACCCATCTCTATCCGAGCAGCTCAAAAATCTCTCCACAACCACGCTTGCCAATGCACCAAACGACCAAACCCATCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAGCCCAAACGCTCGGTTCTCTCTCTCCACAGGCAAAAACGTTCTTCTTACTCTTATAACCCCCAGATGCGAGACCTTAAATCCTTCGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGAAGCTTCTTTCATGGCGGCTCTTGAGGAAATCCCCCATCCACCCACTAAAGAAAATGCCCTTCTTATTCTCAATAGCTTGAGGCCATGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGACCCAGAATCTGTTTCCTATGGAGACCATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCTAATGAGATGATTACCACTGGGATTGAGCTAGATAACATTACTTATTCTACTATTATCACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCTGTGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAAGTTACTTACTCTGCTATTTTAGATGTTTATGCAAATTTAGGGAAAGTTGAGGAGGTTCTTACTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGAAGCCTGATCCTTTTACATTTTCTGTGTTGGGGAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAGTCTATTGAGGTGCAGCCTAATCTTGTGGTGTATAACACCTTGTTGGATGCAATGGGGAAGGCAGGGAAGCCTGGTTTTGCAAGAAGCCTGTTCGACGAAATGGTTGAATCGGGGATAACACCGAATGAGAAGACATTGACTGCTTTGGTTAAGATTTATGGAAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTGTGGGAGCGGATGAGGTCGAATGGGTGGCCAATGGACTTCATTCTGTATAATACATTGTTGAATATGTGTGCAGATCTTGGTTTGGAGGAGGAAGCTGAGAAACTCTTTGAAGAGATGAAGAAGTCGGAGCGTTCTAGGCCAGATAGTTGGAGTTACACAGCAATGTTGAATATACATGGCAGCGGAGGTAATGTAAAAAGATCCATGGAGTTGTTTGAAGAAATGCTCGAGTTGGGTGTTGAGATTAATGTGATGTGTTGCACTTGTTTGATTCAGTGCTTAGGGAAATCGGGGAGAATTGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAGAAAGGAATTAAGCCAGATGATAGGCTTTGTGGTTGCTTGTTGTCTGTTGTGTCCTTGTGTGACAATAGTGAAGATATTAGCAAGGTCTTCACTTGTCTACAACAAGCTAACCCCAAGTTAGTTGCCTTTGTAAATCTTCTACAACAAAATGACATTACCTTCGAAGTTGTCAAAGATGAATTCAGAAACATTCTCAGTGAGACAGCCACTGAAGCCCGACGGCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTGTATGGATTGTACCCAGGCCTACACAACAAAACCGAAGCTGAATGGTGTCTGGATGTTCGATCTCTATCAGTAGGTGCAGCTCAGACTGCACTTGAAGAATGGATGGTAACTCTGACAAAAATCGTACAACGAGAAGAAACATTACCTGAGTTGTTATCAGCTCAAACTGGTGCAGGAACTCACAGATTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTGGATAAACTTGCTGCTCCGTTTCAACTGCGAGAAGATCGGGCCGGTTGGTTTGTAGCCACAAGGGAGGACTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTAGCTGCCACAGCTTAA

mRNA sequence

ATGGCGGCTCCTCTTTCTTCCTCTCTCGATCTCAATCTCAAACCAACCCCCATCTTCTTCACTTCCCCTCTCCCCCGGAACAGTTTCACCAAACGATTAACAGTCCTCTGTTCCTCCTCCTCCAAATCCCCTAGAAGAGCTTCTCCAATTTCATCAGAATCGACCGACAACAAAAACCCATCTCTATCCGAGCAGCTCAAAAATCTCTCCACAACCACGCTTGCCAATGCACCAAACGACCAAACCCATCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAGCCCAAACGCTCGGTTCTCTCTCTCCACAGGCAAAAACGTTCTTCTTACTCTTATAACCCCCAGATGCGAGACCTTAAATCCTTCGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGAAGCTTCTTTCATGGCGGCTCTTGAGGAAATCCCCCATCCACCCACTAAAGAAAATGCCCTTCTTATTCTCAATAGCTTGAGGCCATGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGACCCAGAATCTGTTTCCTATGGAGACCATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCTAATGAGATGATTACCACTGGGATTGAGCTAGATAACATTACTTATTCTACTATTATCACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCTGTGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAAGTTACTTACTCTGCTATTTTAGATGTTTATGCAAATTTAGGGAAAGTTGAGGAGGTTCTTACTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGAAGCCTGATCCTTTTACATTTTCTGTGTTGGGGAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAGTCTATTGAGGTGCAGCCTAATCTTGTGGTGTATAACACCTTGTTGGATGCAATGGGGAAGGCAGGGAAGCCTGGTTTTGCAAGAAGCCTGTTCGACGAAATGGTTGAATCGGGGATAACACCGAATGAGAAGACATTGACTGCTTTGGTTAAGATTTATGGAAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTGTGGGAGCGGATGAGGTCGAATGGGTGGCCAATGGACTTCATTCTGTATAATACATTGTTGAATATGTGTGCAGATCTTGGTTTGGAGGAGGAAGCTGAGAAACTCTTTGAAGAGATGAAGAAGTCGGAGCGTTCTAGGCCAGATAGTTGGAGTTACACAGCAATGTTGAATATACATGGCAGCGGAGGTAATGTAAAAAGATCCATGGAGTTGTTTGAAGAAATGCTCGAGTTGGGTGTTGAGATTAATGTGATGTGTTGCACTTGTTTGATTCAGTGCTTAGGGAAATCGGGGAGAATTGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAGAAAGGAATTAAGCCAGATGATAGGCTTTGTGGTTGCTTGTTGTCTGTTGTGTCCTTGTGTGACAATAGTGAAGATATTAGCAAGGTCTTCACTTGTCTACAACAAGCTAACCCCAAGTTAGTTGCCTTTGTAAATCTTCTACAACAAAATGACATTACCTTCGAAGTTGTCAAAGATGAATTCAGAAACATTCTCAGTGAGACAGCCACTGAAGCCCGACGGCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTGTATGGATTGTACCCAGGCCTACACAACAAAACCGAAGCTGAATGGTGTCTGGATGTTCGATCTCTATCAGTAGGTGCAGCTCAGACTGCACTTGAAGAATGGATGGTAACTCTGACAAAAATCGTACAACGAGAAGAAACATTACCTGAGTTGTTATCAGCTCAAACTGGTGCAGGAACTCACAGATTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTGGATAAACTTGCTGCTCCGTTTCAACTGCGAGAAGATCGGGCCGGTTGGTTTGTAGCCACAAGGGAGGACTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTAGCTGCCACAGCTTAA

Coding sequence (CDS)

ATGGCGGCTCCTCTTTCTTCCTCTCTCGATCTCAATCTCAAACCAACCCCCATCTTCTTCACTTCCCCTCTCCCCCGGAACAGTTTCACCAAACGATTAACAGTCCTCTGTTCCTCCTCCTCCAAATCCCCTAGAAGAGCTTCTCCAATTTCATCAGAATCGACCGACAACAAAAACCCATCTCTATCCGAGCAGCTCAAAAATCTCTCCACAACCACGCTTGCCAATGCACCAAACGACCAAACCCATCTCTTATCTAAGCCTAAATCCACTTGGGTTAACCCCACCAAGCCCAAACGCTCGGTTCTCTCTCTCCACAGGCAAAAACGTTCTTCTTACTCTTATAACCCCCAGATGCGAGACCTTAAATCCTTCGCCCATAAGCTCAATGCCTGTGATTCCTCTGATGAAGCTTCTTTCATGGCGGCTCTTGAGGAAATCCCCCATCCACCCACTAAAGAAAATGCCCTTCTTATTCTCAATAGCTTGAGGCCATGGCAGAAAACCCATTTGTTCTTCAATTGGATTAAGACCCAGAATCTGTTTCCTATGGAGACCATCTTCTACAATGTGGCTATGAAGTCTTTGAGGTATGGTAGGCAGTTTCAGCTTATTGAAGATCTTGCTAATGAGATGATTACCACTGGGATTGAGCTAGATAACATTACTTATTCTACTATTATCACTTGTGCTAAAAAGTGTAGTAGGTTTGATAAGGCTGTGGAGTGGTTTGAGAGAATGTATAAAACTGGTTTGATGCCTGATGAAGTTACTTACTCTGCTATTTTAGATGTTTATGCAAATTTAGGGAAAGTTGAGGAGGTTCTTACTTTGTATGAAAGAGGGAGAGCTAGTGGTTGGAAGCCTGATCCTTTTACATTTTCTGTGTTGGGGAAGATGTTTGGAGAGGCAGGGGATTATGATGGGATTATGTATGTTTTGCAAGAAATGAAGTCTATTGAGGTGCAGCCTAATCTTGTGGTGTATAACACCTTGTTGGATGCAATGGGGAAGGCAGGGAAGCCTGGTTTTGCAAGAAGCCTGTTCGACGAAATGGTTGAATCGGGGATAACACCGAATGAGAAGACATTGACTGCTTTGGTTAAGATTTATGGAAAGGCGAGGTGGGCTCGAGATGCTTTAGACTTGTGGGAGCGGATGAGGTCGAATGGGTGGCCAATGGACTTCATTCTGTATAATACATTGTTGAATATGTGTGCAGATCTTGGTTTGGAGGAGGAAGCTGAGAAACTCTTTGAAGAGATGAAGAAGTCGGAGCGTTCTAGGCCAGATAGTTGGAGTTACACAGCAATGTTGAATATACATGGCAGCGGAGGTAATGTAAAAAGATCCATGGAGTTGTTTGAAGAAATGCTCGAGTTGGGTGTTGAGATTAATGTGATGTGTTGCACTTGTTTGATTCAGTGCTTAGGGAAATCGGGGAGAATTGATGATCTAGTTCGAGTTTTCAATGTTTCGGTACAGAAAGGAATTAAGCCAGATGATAGGCTTTGTGGTTGCTTGTTGTCTGTTGTGTCCTTGTGTGACAATAGTGAAGATATTAGCAAGGTCTTCACTTGTCTACAACAAGCTAACCCCAAGTTAGTTGCCTTTGTAAATCTTCTACAACAAAATGACATTACCTTCGAAGTTGTCAAAGATGAATTCAGAAACATTCTCAGTGAGACAGCCACTGAAGCCCGACGGCCTTTCTGCAATTGCTTGATTGATATATGTCGAAACCAAAATCTTCGCGAGAGAGCTCATGAATTGCTCTACTTGGGAAGTTTGTATGGATTGTACCCAGGCCTACACAACAAAACCGAAGCTGAATGGTGTCTGGATGTTCGATCTCTATCAGTAGGTGCAGCTCAGACTGCACTTGAAGAATGGATGGTAACTCTGACAAAAATCGTACAACGAGAAGAAACATTACCTGAGTTGTTATCAGCTCAAACTGGTGCAGGAACTCACAGATTTTCTCAAGGACTAGCCAATTCATTTGCTTCTCATGTGGATAAACTTGCTGCTCCGTTTCAACTGCGAGAAGATCGGGCCGGTTGGTTTGTAGCCACAAGGGAGGACTTAGTTACATGGGTGCATTCAAGAGTACCATCTGTAGCTGCCACAGCTTAA

Protein sequence

MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA

Homology

[Close]

BLAST of CcUC10G187800 vs. NCBI nr
Match: XP_038906217.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa hispida])

HSP 1 Score: 1364.7 bits (3531), Expect = 0.0e+00
Identity = 679/711 (95.50%), Postives = 700/711 (98.45%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MAAPLSSSLDLNLKPT  FFTSPL R +FTKRLTV+C +SSK PR+ASPISSES DNKNP
Sbjct: 1   MAAPLSSSLDLNLKPT--FFTSPLRRKNFTKRLTVIC-TSSKPPRKASPISSESIDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLSEQLKNLSTTTL+NAPND++HLLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSEQLKNLSTTTLSNAPNDESHLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSDEA+FMAALEEIPHPPTKENALL+LNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEAAFMAALEEIPHPPTKENALLVLNSLRPWQKTHLFFNWIKTQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQL+EDLANEMI+TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLVEDLANEMISTGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDPFTFSVLGKM
Sbjct: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPFTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRID+LVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQA+PKLVAFVN
Sbjct: 481 GRIDELVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQADPKLVAFVN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQNDITFEVVK+EFRNIL ETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTH+F
Sbjct: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHKF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 708

[Close]

BLAST of CcUC10G187800 vs. NCBI nr
Match: XP_008448710.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis melo] >KAA0053056.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK11511.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MAAPLSSSLD  LKPTPIFFTS L R    KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           +EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CcUC10G187800 vs. NCBI nr
Match: XP_004148730.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sativus] >KGN55781.1 hypothetical protein Csa_011464 [Cucumis sativus])

HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 666/711 (93.67%), Postives = 691/711 (97.19%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MA PLSSSLDL LKPTPIFFTSPL R + TKRLT+LC SSSKSPR+ S +SS+S DNKNP
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLC-SSSKSPRKPSSVSSQSVDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLSEQLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSD+ASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QN
Sbjct: 121 DLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMI+ GIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           +EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGW PDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDI+KVFTCLQQANPKLV+F+N
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFIN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQNDITFEVVK+EFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]

BLAST of CcUC10G187800 vs. NCBI nr
Match: KAG7015666.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1287.7 bits (3331), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0


Query: 1   MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
           MAAPLSSSLD  L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR        STD 
Sbjct: 1   MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60

Query: 61  KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
           KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61  KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120

Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
           +MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180

Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
           TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240

Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
           DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300

Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
           GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360

Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
           TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420

Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
           LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480

Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
           GK+ RIDDLVRVF+VS++KG+KPDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSIRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540

Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
           FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600

Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
           YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660

Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA  A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705

[Close]

BLAST of CcUC10G187800 vs. NCBI nr
Match: XP_022923274.1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0


Query: 1   MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
           MAAPLSSSLD  L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR        STD 
Sbjct: 1   MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60

Query: 61  KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
           KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61  KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120

Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
           +MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180

Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
           TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240

Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
           DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300

Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
           GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360

Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
           TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420

Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
           LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480

Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
           GK+ RIDDLVRVF+VSV+KG++PDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSVRKGVEPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540

Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
           FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600

Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
           YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660

Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA  A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705

[Close]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 982.6 bits (2539), Expect = 2.3e-285
Identity = 479/717 (66.81%), Postives = 592/717 (82.57%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPT-------PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSE 60
           MA  L++++D+   P         +F    L R S +++L + C SS K P+    +  E
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISC-SSLKQPK---TLEEE 60

Query: 61  STDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSY 120
               K PSLSEQLK LS TTL     +QT +LSKPKS WVNPT+PKRSVLSL RQKRS+Y
Sbjct: 61  PITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAY 120

Query: 121 SYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFF 180
           SYNPQ++DL++FA KLN+   ++++ F++ L+EIPHPP ++NALL+LNSLR WQKTH FF
Sbjct: 121 SYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFF 180

Query: 181 NWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKK 240
           NW+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITCAK+
Sbjct: 181 NWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 240

Query: 241 CSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFT 300
           C+ ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVL+LYER  A+GWKPD   
Sbjct: 241 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 300

Query: 301 FSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMV 360
           FSVLGKMFGEAGDYDGI YVLQEMKS++V+PN+VVYNTLL+AMG+AGKPG ARSLF+EM+
Sbjct: 301 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 360

Query: 361 ESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEE 420
           E+G+TPNEKTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLLNMCAD+GLEE
Sbjct: 361 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 420

Query: 421 EAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCL 480
           EAE+LF +MK+S + RPD++SYTAMLNI+GSGG  +++MELFEEML+ GV++NVM CTCL
Sbjct: 421 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 480

Query: 481 IQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANP 540
           +QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC++SED  KV  CL++AN 
Sbjct: 481 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 540

Query: 541 KLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLY 600
           KLV FVNL+      +E VK+EF+ +++ T  EARRPFCNCLIDICR  N  ERAHELLY
Sbjct: 541 KLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLY 600

Query: 601 LGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQT 660
           LG+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL  I++R+E LPEL  AQT
Sbjct: 601 LGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQT 660

Query: 661 GAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 711
           G GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 GTGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 446.0 bits (1146), Expect = 7.7e-124
Identity = 237/615 (38.54%), Postives = 367/615 (59.67%), Query Frame = 0


Query: 92  WVNPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPP 151
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC   +EA     +       
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148

Query: 152 TKENALLILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 211
            +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208

Query: 212 MITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGK 271
           M+  GI+ DN T++TII+CA++     +AVEWFE+M   G  PD VT +A++D Y   G 
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268

Query: 272 VEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT 331
           V+  L+LY+R R   W+ D  TFS L +++G +G+YDG + + +EMK++ V+PNLV+YN 
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328

Query: 332 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 391
           L+D+MG+A +P  A+ ++ +++ +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388

Query: 392 WPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRS 451
             +  ILYNTLL+MCAD    +EA ++F++MK  E   PDSW++++++ ++   G V  +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448

Query: 452 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 511
                +M E G E  +   T +IQC GK+ ++DD+VR F+  ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508

Query: 512 VSLCDNSEDISKVFTCLQQANPKLVAFVNLL-QQNDITFEVVKDEFRNILSETATEARRP 571
           ++    SE+I K+  C+++A PKL   V +L ++ +    V K E   ++    ++ ++ 
Sbjct: 509 MTQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568

Query: 572 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEE 631
           + NCLID+C N N  ERA E+L LG  Y +Y GL +K+  +W L ++SLS+GAA TAL  
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628

Query: 632 WMVTLTK-IVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 691
           WM  L++  ++  E  P LL   TG G H++S +GLA  F SH+ +L APF    D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688

Query: 692 FVATREDLVTWVHSR 704
           F+ T      W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694

[Close]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.9e-123
Identity = 251/679 (36.97%), Postives = 389/679 (57.29%), Query Frame = 0


Query: 39  SSSKSPRR-ASPISSESTDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTK 98
           S+S +P+  +SP+++  +  + P    Q ++ S  + +N    +    S  +  WVNP  
Sbjct: 23  SASFNPKNPSSPVAAHVSVQETP---PQPQDPSPPSDSNPNGTRPSSSSNTRFLWVNPNS 82

Query: 99  PKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENAL 158
           P+ + ++  R      + + +   L S A  L AC++++ A   A     P PP++++A+
Sbjct: 83  PRAADVARAR------AGSGRRARLASAAAALGACETTESAVEAALQAAFPEPPSEQDAV 142

Query: 159 LILNSLRPW--QKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITT 218
           ++LN+      +   L   W         + I YNV +K LR  R +   E L  EM+  
Sbjct: 143 IVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRD 202

Query: 219 GIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEV 278
           G++ DN T+ST+I+CA+ C    KAVEWF++M + G  PD +TYSA++D Y + G  E  
Sbjct: 203 GVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAA 262

Query: 279 LTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDA 338
           L LY+R RA  W+ DP   S + K+   +G++DG + V +EMK+I V+PNLVVYNT+LDA
Sbjct: 263 LRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDA 322

Query: 339 MGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMD 398
           MG+A +P   +++  EMV+  + P+  T   L+  Y +AR+  DA+ ++  M+     +D
Sbjct: 323 MGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGID 382

Query: 399 FILYNTLLNMCADLGLEEEAEKLFEEMKKS--ERSRPDSWSYTAMLNIHGSGGNVKRSME 458
            +LYN LL+MCAD+G  +EAE++F +MK S    S+PDSWSY++M+ ++ S  NV  +  
Sbjct: 383 VMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEG 442

Query: 459 LFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVS 518
           +  EM+E G + N+   T LI+C GK GR DD+VR F +    GI PDDR CGCLLSV +
Sbjct: 443 ILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAA 502

Query: 519 LCDNSEDISKVFTCLQQANPKLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCN 578
               +E++ KV +C++++N +L A V LL     + E  ++  R +L  +    + P+CN
Sbjct: 503 NTP-AEELGKVISCIERSNVQLGAVVKLLVDRS-SSESFREAARELLRSSRGVVKMPYCN 562

Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMV 638
           CL+D+C N N  E+A  LL      G+Y  +  +T+ +W L +R LSVGAA T L  WM 
Sbjct: 563 CLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMN 622

Query: 639 TL-TKIVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVA 698
            L T +    E LP LL   TG G + +S +GLA  F +H+ +L APF    D+AGWF+ 
Sbjct: 623 DLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLT 682

Query: 699 TREDLVTWVHSRVPSVAAT 711
           T      W+ S+  S   T
Sbjct: 683 TNVAAKQWLESKAASELVT 690

[Close]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 5.5e-122
Identity = 257/676 (38.02%), Postives = 383/676 (56.66%), Query Frame = 0


Query: 38  SSSSKSPRRASPISSESTDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKST----WV 97
           SS    P RA  +S +    KNPS S     +S       P+D      +  +T    WV
Sbjct: 5   SSLLSWPHRAISLSFQP---KNPSPSPATARVSVQDPPPPPSDANPSPGRSSNTSRYVWV 64

Query: 98  NPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALE-EIPHPPT 157
           NP  P+ + L+  R      + + +   L + A  L AC++  EA   AALE   P PP+
Sbjct: 65  NPNSPRAAGLARAR------AGSGRRARLAAAAAALAACEAG-EAPVAAALEAAFPEPPS 124

Query: 158 KENALLILN--SLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLAN 217
           +++A+++LN  S RP     L   W         E I YNVA+K+LR  R++   E L  
Sbjct: 125 EQDAVIVLNTTSARP-AAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWE 184

Query: 218 EMITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLG 277
           EM+  G++ DN T+ST+I+CA+ C    KAVEWFE+M   G  PD +TYSA++D Y   G
Sbjct: 185 EMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAG 244

Query: 278 KVEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYN 337
             E  L LY+R RA  W+ DP   + + ++   +G++DG + V +EMK+  V+PNLVVYN
Sbjct: 245 DAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYN 304

Query: 338 TLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSN 397
           T+LDAMG+A +P   +++  E+V     PN+ T   L+  Y +AR+  DA+ ++  M+  
Sbjct: 305 TVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDE 364

Query: 398 GWPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKS--ERSRPDSWSYTAMLNIHGSGGNV 457
              +D +LYN LL+MCAD+G  EEAE++F +MK S   RS+PDSWSY++M+ ++   GNV
Sbjct: 365 VMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNV 424

Query: 458 KRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCL 517
             +  +  EM+E G + N+   T LI+C GK+GR DD+VR F +    GI PDDR CGCL
Sbjct: 425 AGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCL 484

Query: 518 LSVVSLCDNSEDISKVFTCLQQANPKLVAFVNLLQQNDITFEVVKDEFRNILSETATEAR 577
           L+V +    ++++ KV  C+ +++ +L A V LL       E +++    +L       R
Sbjct: 485 LTVAA-GTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVR 544

Query: 578 RPFCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTAL 637
            P+CNCL+D+  N +  E+A  LL +    G+Y  +  +T+ +W L +R LSVGAA T L
Sbjct: 545 MPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTL 604

Query: 638 EEWMVTLTKIVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAG 697
             WM  L   +Q  + LP LL   TG G + +S +GLA  F SH+ +L APF    D+AG
Sbjct: 605 HVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAG 664

Query: 698 WFVATREDLVTWVHSR 704
           WF+ T      W+ ++
Sbjct: 665 WFLTTSVAARHWLETK 668

[Close]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot
Match: Q8GYP6 (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX=3702 GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-45
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
            + +TY+ +I    + +  ++A+  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
           Y+R +A G  PD FT+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
           Y+ ++ +    G  EEAE +F EM++ +   PD   Y  ++++ G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +  D  
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696

Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
             +   F     A+    A + LL+      +        + F +++     E++R   +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756

Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
            ++D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816

Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
               K +    T P  +   TG G      G   +  +    ++   +PF      +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849

Query: 699 VATREDLVTWV 701
           V + E L  W+
Sbjct: 877 VGSGEPLNRWL 849

[Close]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match: A0A5A7UFR2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001750 PE=3 SV=1)

HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MAAPLSSSLD  LKPTPIFFTS L R    KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           +EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match: A0A1S3BKZ1 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490799 PE=3 SV=1)

HSP 1 Score: 1342.8 bits (3474), Expect = 0.0e+00
Identity = 667/711 (93.81%), Postives = 692/711 (97.33%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MAAPLSSSLD  LKPTPIFFTS L R    KRLT+LC SSSKSPR+ S ISSES DNKNP
Sbjct: 1   MAAPLSSSLDFKLKPTPIFFTSLLRRKYVNKRLTLLC-SSSKSPRKPSSISSESIDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLS+QLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSDQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSDEASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN
Sbjct: 121 DLKSFAHKLNACDSSDEASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQLIEDLAN+M++TGIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANDMVSTGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           +EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGWKPDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWKPDPYTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEML+LGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLKLGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDI+KVFTCLQQANPKLV+FVN
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDINKVFTCLQQANPKLVSFVN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQN ITFEV+K+EFRNILSETA+EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNSITFEVIKNEFRNILSETASEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQR+E LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQRKEALPELLSAQTGAGTHRF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSV ATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVPATA 710

[Close]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match: A0A0A0L6K8 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV=1)

HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 666/711 (93.67%), Postives = 691/711 (97.19%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPTPIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDNKNP 60
           MA PLSSSLDL LKPTPIFFTSPL R + TKRLT+LC SSSKSPR+ S +SS+S DNKNP
Sbjct: 1   MAVPLSSSLDLKLKPTPIFFTSPLRRKNVTKRLTLLC-SSSKSPRKPSSVSSQSVDNKNP 60

Query: 61  SLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNPQMR 120
           SLSEQLKNLSTTTL+NAPND+T LLSKPKSTWVNPTKPKRSVLSL RQKRSSYSYNP+MR
Sbjct: 61  SLSEQLKNLSTTTLSNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMR 120

Query: 121 DLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKTQN 180
           DLKSFAHKLNACDSSD+ASF+AALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK+QN
Sbjct: 121 DLKSFAHKLNACDSSDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQN 180

Query: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRFDKA 240
           LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMI+ GIELDNITYSTIITCAKKCSRFDKA
Sbjct: 181 LFPMETIFYNVAMKSLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKA 240

Query: 241 VEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVLGKM 300
           +EWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVL+LYERGRASGW PDP+TFSVLGKM
Sbjct: 241 MEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKM 300

Query: 301 FGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360
           FGEAGDYDGIMYVLQEMKSIE+QPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN
Sbjct: 301 FGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPN 360

Query: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEKLFE 420
           EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAE LFE
Sbjct: 361 EKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFE 420

Query: 421 EMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480
           EMKKS+ SRPDSWSYTAMLNI+GSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS
Sbjct: 421 EMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCLGKS 480

Query: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVAFVN 540
           GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV+SLC NSEDI+KVFTCLQQANPKLV+F+N
Sbjct: 481 GRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSEDINKVFTCLQQANPKLVSFIN 540

Query: 541 LLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600
           LLQQNDITFEVVK+EFRNIL ETA EARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL
Sbjct: 541 LLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDICRNQNLRERAHELLYLGSLYGL 600

Query: 601 YPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGTHRF 660
           YPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGTHRF
Sbjct: 601 YPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGTHRF 660

Query: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA
Sbjct: 661 SQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 710

[Close]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match: A0A6J1E5X7 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431017 PE=3 SV=1)

HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 641/714 (89.78%), Postives = 678/714 (94.96%), Query Frame = 0


Query: 1   MAAPLSSSLD--LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSESTDN 60
           MAAPLSSSLD  L LKPT P+FFTSPL RN+FTKR TVLC+SSSKSPR        STD 
Sbjct: 1   MAAPLSSSLDIKLKLKPTPPLFFTSPLRRNNFTKRFTVLCTSSSKSPR--------STDK 60

Query: 61  KNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSYNP 120
           KNPSLSEQLK+LST+TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSYNP
Sbjct: 61  KNPSLSEQLKDLSTSTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSYNP 120

Query: 121 QMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIK 180
           +MR+LK+FAHKLNA DSS EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNWIK
Sbjct: 121 KMRELKTFAHKLNASDSS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNWIK 180

Query: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCSRF 240
           TQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCSRF
Sbjct: 181 TQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCSRF 240

Query: 241 DKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFSVL 300
           DKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFSVL
Sbjct: 241 DKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFSVL 300

Query: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGI 360
           GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAG+PGFARSLF+EM+ESGI
Sbjct: 301 GKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGRPGFARSLFEEMIESGI 360

Query: 361 TPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAEK 420
           TPNEKTLTALVKIYGKARWARDAL+LWERMRS GWPMDFILYNTLLNMCADLGLEEEAEK
Sbjct: 361 TPNEKTLTALVKIYGKARWARDALELWERMRSKGWPMDFILYNTLLNMCADLGLEEEAEK 420

Query: 421 LFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQCL 480
           LFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQCL
Sbjct: 421 LFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQCL 480

Query: 481 GKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKLVA 540
           GK+ RIDDLVRVF+VSV+KG++PDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKLVA
Sbjct: 481 GKARRIDDLVRVFDVSVRKGVEPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKLVA 540

Query: 541 FVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLGSL 600
           FVNLLQQNDITF+V+KDEFR IL ETATEARRPFCNCLIDICRNQNL +RAHELLYLGSL
Sbjct: 541 FVNLLQQNDITFDVIKDEFRTILGETATEARRPFCNCLIDICRNQNLSKRAHELLYLGSL 600

Query: 601 YGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGAGT 660
           YGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGAGT
Sbjct: 601 YGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGAGT 660

Query: 661 HRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           HRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED+V WVHSRVPSVA  A
Sbjct: 661 HRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDVVAWVHSRVPSVATRA 705

[Close]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL
Match: A0A6J1L5S8 (pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111500252 PE=3 SV=1)

HSP 1 Score: 1276.2 bits (3301), Expect = 0.0e+00
Identity = 639/716 (89.25%), Postives = 673/716 (93.99%), Query Frame = 0


Query: 1   MAAPLSSSLD----LNLKPT-PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSEST 60
           MAAPLSSSLD    L LKPT P+FFTSPL RN+FTKRLTVLC +SSKSPR        ST
Sbjct: 1   MAAPLSSSLDIKLRLKLKPTPPLFFTSPLRRNNFTKRLTVLC-TSSKSPR--------ST 60

Query: 61  DNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSYSY 120
           D KN SLSEQLK+LST TL+NA ND++HLLS PKS WVNPTKPKRSVLSL RQKRSSYSY
Sbjct: 61  DKKNSSLSEQLKDLSTCTLSNASNDESHLLSNPKSIWVNPTKPKRSVLSLQRQKRSSYSY 120

Query: 121 NPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFFNW 180
           NP+MR+LK+FAHKLNA D S EA+FMA L+EIPHPPTKENALLILNSL+PWQKTHLFFNW
Sbjct: 121 NPKMRELKTFAHKLNASDFS-EAAFMAVLKEIPHPPTKENALLILNSLKPWQKTHLFFNW 180

Query: 181 IKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKKCS 240
           IKTQNLFPMETIFYNVAMKSLRYGRQFQLIE+LANEMI TGIELDNITYSTIITCAKKCS
Sbjct: 181 IKTQNLFPMETIFYNVAMKSLRYGRQFQLIEELANEMINTGIELDNITYSTIITCAKKCS 240

Query: 241 RFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFTFS 300
           RFDKA+EWFERMY+TGLMPDEVTYSAILDVYANLGKVEE L+LYERGRASGWKPDP+TFS
Sbjct: 241 RFDKAMEWFERMYRTGLMPDEVTYSAILDVYANLGKVEEALSLYERGRASGWKPDPYTFS 300

Query: 301 VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVES 360
           VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT+LDAMGKAG+PGFARSLF+EM+ES
Sbjct: 301 VLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTMLDAMGKAGRPGFARSLFEEMIES 360

Query: 361 GITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEA 420
           GITPNEKTLTALVKIYGKARWARDALDLWERMRS GWPMDFILYNTLLNMCADLGLEEEA
Sbjct: 361 GITPNEKTLTALVKIYGKARWARDALDLWERMRSKGWPMDFILYNTLLNMCADLGLEEEA 420

Query: 421 EKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCLIQ 480
           EKLFEEMKKSE SRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGV INVMCCTCLIQ
Sbjct: 421 EKLFEEMKKSEHSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVGINVMCCTCLIQ 480

Query: 481 CLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANPKL 540
           CLGK+ RIDDLVRVF+VSV+KG+KPDDRLCGCLLSVVSLCDN+EDISKVFTCLQQANPKL
Sbjct: 481 CLGKARRIDDLVRVFDVSVRKGVKPDDRLCGCLLSVVSLCDNNEDISKVFTCLQQANPKL 540

Query: 541 VAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLYLG 600
           V FVNLLQQNDITF+V+KDEFR IL ET TEARRPFCNCLIDICRNQNL +RAHELLYLG
Sbjct: 541 VEFVNLLQQNDITFDVIKDEFRTILGETTTEARRPFCNCLIDICRNQNLSKRAHELLYLG 600

Query: 601 SLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQTGA 660
           SLYGLYPGLHNKTE EWCLDVRSLSVGAAQTALEEWM+TL+KIVQREE LPELLSAQTGA
Sbjct: 601 SLYGLYPGLHNKTEGEWCLDVRSLSVGAAQTALEEWMITLSKIVQREEALPELLSAQTGA 660

Query: 661 GTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAATA 712
           GTHRFSQGLANSFASHV+KLAAPF+LREDRAGWFVATRED V WVHSRVPSVA TA
Sbjct: 661 GTHRFSQGLANSFASHVEKLAAPFRLREDRAGWFVATREDFVAWVHSRVPSVATTA 706

[Close]

BLAST of CcUC10G187800 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 982.6 bits (2539), Expect = 1.6e-286
Identity = 479/717 (66.81%), Postives = 592/717 (82.57%), Query Frame = 0


Query: 1   MAAPLSSSLDLNLKPT-------PIFFTSPLPRNSFTKRLTVLCSSSSKSPRRASPISSE 60
           MA  L++++D+   P         +F    L R S +++L + C SS K P+    +  E
Sbjct: 1   MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISC-SSLKQPK---TLEEE 60

Query: 61  STDNKNPSLSEQLKNLSTTTLANAPNDQTHLLSKPKSTWVNPTKPKRSVLSLHRQKRSSY 120
               K PSLSEQLK LS TTL     +QT +LSKPKS WVNPT+PKRSVLSL RQKRS+Y
Sbjct: 61  PITTKTPSLSEQLKPLSATTLR---QEQTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAY 120

Query: 121 SYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPPTKENALLILNSLRPWQKTHLFF 180
           SYNPQ++DL++FA KLN+   ++++ F++ L+EIPHPP ++NALL+LNSLR WQKTH FF
Sbjct: 121 SYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFF 180

Query: 181 NWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIELDNITYSTIITCAKK 240
           NW+K+++LFPMETIFYNV MKSLR+GRQFQLIE++A EM+  G+ELDNITYSTIITCAK+
Sbjct: 181 NWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 240

Query: 241 CSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTLYERGRASGWKPDPFT 300
           C+ ++KA+EWFERMYKTGLMPDEVTYSAILDVY+  GKVEEVL+LYER  A+GWKPD   
Sbjct: 241 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 300

Query: 301 FSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGKAGKPGFARSLFDEMV 360
           FSVLGKMFGEAGDYDGI YVLQEMKS++V+PN+VVYNTLL+AMG+AGKPG ARSLF+EM+
Sbjct: 301 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 360

Query: 361 ESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEE 420
           E+G+TPNEKTLTALVKIYGKARWARDAL LWE M++  WPMDFILYNTLLNMCAD+GLEE
Sbjct: 361 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 420

Query: 421 EAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEMLELGVEINVMCCTCL 480
           EAE+LF +MK+S + RPD++SYTAMLNI+GSGG  +++MELFEEML+ GV++NVM CTCL
Sbjct: 421 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 480

Query: 481 IQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNSEDISKVFTCLQQANP 540
           +QCLGK+ RIDD+V VF++S+++G+KPDDRLCGCLLSV++LC++SED  KV  CL++AN 
Sbjct: 481 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANK 540

Query: 541 KLVAFVNLLQQNDITFEVVKDEFRNILSETATEARRPFCNCLIDICRNQNLRERAHELLY 600
           KLV FVNL+      +E VK+EF+ +++ T  EARRPFCNCLIDICR  N  ERAHELLY
Sbjct: 541 KLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLY 600

Query: 601 LGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEEWMVTLTKIVQREETLPELLSAQT 660
           LG+L+GLYPGLHNKT  EW LDVRSLSVGAA+TALEEWM TL  I++R+E LPEL  AQT
Sbjct: 601 LGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQT 660

Query: 661 GAGTHRFSQGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVTWVHSRVPSVAAT 711
           G GTHRFSQGLANSFA H+ +L+APF+ + DR G FVAT+EDLV+W+ S+ P +  +
Sbjct: 661 GTGTHRFSQGLANSFALHLQQLSAPFR-QSDRPGIFVATKEDLVSWLESKFPPLVTS 709

[Close]

BLAST of CcUC10G187800 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 446.0 bits (1146), Expect = 5.5e-125
Identity = 237/615 (38.54%), Postives = 367/615 (59.67%), Query Frame = 0


Query: 92  WVNPTKPKRSVLSLHRQKRSSYSYNPQMRDLKSFAHKLNACDSSDEASFMAALEEIPHPP 151
           WVNP  P+ S L   R+K    SY+ +   L   A  L+AC   +EA     +       
Sbjct: 89  WVNPKSPRASQL---RRK----SYDSRYSSLIKLAESLDAC-KPNEADVCDVITGFGGKL 148

Query: 152 TKENALLILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANE 211
            +++A++ LN++   +   L  N +        E I YNV MK  R  +  +  E L +E
Sbjct: 149 FEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDE 208

Query: 212 MITTGIELDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGK 271
           M+  GI+ DN T++TII+CA++     +AVEWFE+M   G  PD VT +A++D Y   G 
Sbjct: 209 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 268

Query: 272 VEEVLTLYERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNT 331
           V+  L+LY+R R   W+ D  TFS L +++G +G+YDG + + +EMK++ V+PNLV+YN 
Sbjct: 269 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 328

Query: 332 LLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNG 391
           L+D+MG+A +P  A+ ++ +++ +G TPN  T  ALV+ YG+AR+  DAL ++  M+  G
Sbjct: 329 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 388

Query: 392 WPMDFILYNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRS 451
             +  ILYNTLL+MCAD    +EA ++F++MK  E   PDSW++++++ ++   G V  +
Sbjct: 389 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 448

Query: 452 MELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSV 511
                +M E G E  +   T +IQC GK+ ++DD+VR F+  ++ GI PDDR CGCLL+V
Sbjct: 449 EAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 508

Query: 512 VSLCDNSEDISKVFTCLQQANPKLVAFVNLL-QQNDITFEVVKDEFRNILSETATEARRP 571
           ++    SE+I K+  C+++A PKL   V +L ++ +    V K E   ++    ++ ++ 
Sbjct: 509 MTQTP-SEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKA 568

Query: 572 FCNCLIDICRNQNLRERAHELLYLGSLYGLYPGLHNKTEAEWCLDVRSLSVGAAQTALEE 631
           + NCLID+C N N  ERA E+L LG  Y +Y GL +K+  +W L ++SLS+GAA TAL  
Sbjct: 569 YLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHV 628

Query: 632 WMVTLTK-IVQREETLPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGW 691
           WM  L++  ++  E  P LL   TG G H++S +GLA  F SH+ +L APF    D+ GW
Sbjct: 629 WMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGW 688

Query: 692 FVATREDLVTWVHSR 704
           F+ T      W+ SR
Sbjct: 689 FLTTSVAAKAWLESR 694

[Close]

BLAST of CcUC10G187800 vs. TAIR 10
Match: AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
            + +TY+ +I    + +  ++A+  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
           Y+R +A G  PD FT+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
           Y+ ++ +    G  EEAE +F EM++ +   PD   Y  ++++ G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +  D  
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696

Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
             +   F     A+    A + LL+      +        + F +++     E++R   +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756

Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
            ++D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816

Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
               K +    T P  +   TG G      G   +  +    ++   +PF      +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849

Query: 699 VATREDLVTWV 701
           V + E L  W+
Sbjct: 877 VGSGEPLNRWL 849

[Close]

BLAST of CcUC10G187800 vs. TAIR 10
Match: AT1G18900.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
            + +TY+ +I    + +  ++A+  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
           Y+R +A G  PD FT+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
           Y+ ++ +    G  EEAE +F EM++ +   PD   Y  ++++ G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +  D  
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696

Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
             +   F     A+    A + LL+      +        + F +++     E++R   +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756

Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
            ++D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816

Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
               K +    T P  +   TG G      G   +  +    ++   +PF      +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849

Query: 699 VATREDLVTWV 701
           V + E L  W+
Sbjct: 877 VGSGEPLNRWL 849

[Close]

BLAST of CcUC10G187800 vs. TAIR 10
Match: AT1G18900.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 7.8e-47
Identity = 131/551 (23.77%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 159 ILNSLRPWQKTHLFFNWIKTQNLFPMETIFYNVAMKSLRYGRQFQLIEDLANEMITTGIE 218
           +L  +  +     FF W+K Q  F  +   Y   + +L   +QF  I  L +EM+  G +
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396

Query: 219 LDNITYSTIITCAKKCSRFDKAVEWFERMYKTGLMPDEVTYSAILDVYANLGKVEEVLTL 278
            + +TY+ +I    + +  ++A+  F +M + G  PD VTY  ++D++A  G ++  + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456

Query: 279 YERGRASGWKPDPFTFSVLGKMFGEAGDYDGIMYVLQEMKSIEVQPNLVVYNTLLDAMGK 338
           Y+R +A G  PD FT+SV                                   +++ +GK
Sbjct: 457 YQRMQAGGLSPDTFTYSV-----------------------------------IINCLGK 516

Query: 339 AGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFIL 398
           AG    A  LF EMV+ G TPN  T   ++ ++ KAR  ++AL L+  M++ G+  D + 
Sbjct: 517 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 576

Query: 399 YNTLLNMCADLGLEEEAEKLFEEMKKSERSRPDSWSYTAMLNIHGSGGNVKRSMELFEEM 458
           Y+ ++ +    G  EEAE +F EM++ +   PD   Y  ++++ G  GNV+++ + ++ M
Sbjct: 577 YSIVMEVLGHCGYLEEAEAVFTEMQQ-KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 636

Query: 459 LELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVVSLCDNS 518
           L  G+  NV  C  L+    +  +I +   +    +  G++P  +    LLS  +  D  
Sbjct: 637 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT--DGR 696

Query: 519 EDISKVFTCLQQANPKLVAFVNLLQQ-----NDITFEVVKDEFRNILSETATEARRPFCN 578
             +   F     A+    A + LL+      +        + F +++     E++R   +
Sbjct: 697 SKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVD 756

Query: 579 CLIDICRNQNLRERAHELLYLGSLYGLYP-GLHNKTEAEWCLDVRSLSVGAAQTALEEWM 638
            ++D       +E A  +  + +   ++P  L  K+ + W +++  +S G A TAL   +
Sbjct: 757 AVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTL 816

Query: 639 VTLTKIVQREETLPELLSAQTGAGTHRFSQG---LANSFASHVDKLAAPFQLREDRAGWF 698
               K +    T P  +   TG G      G   +  +    ++   +PF      +G F
Sbjct: 817 AWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCF 849

Query: 699 VATREDLVTWV 701
           V + E L  W+
Sbjct: 877 VGSGEPLNRWL 849

The following BLAST results are available for this feature:

BLAST of CcUC10G187800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906217.1	0.0e+00	95.50	pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Benincasa ...	[more]
XP_008448710.1	0.0e+00	93.81	PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic ...	[more]
XP_004148730.1	0.0e+00	93.67	pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Cucumis sa...	[more]
KAG7015666.1	0.0e+00	89.78	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_022923274.1	0.0e+00	89.78	pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like [Cucur...	[more]

BLAST of CcUC10G187800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS25	2.3e-285	66.81	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop...	[more]
Q8GWE0	7.7e-124	38.54	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop...	[more]
B4F8Z1	2.9e-123	36.97	Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4...	[more]
Q10PZ4	5.5e-122	38.02	Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza...	[more]
Q8GYP6	1.1e-45	23.77	Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC10G187800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFR2	0.0e+00	93.81	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BKZ1	0.0e+00	93.81	pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Cucumis ...	[more]
A0A0A0L6K8	0.0e+00	93.67	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011820 PE=3 SV...	[more]
A0A6J1E5X7	0.0e+00	89.78	pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cuc...	[more]
A0A6J1L5S8	0.0e+00	89.25	pentatricopeptide repeat-containing protein At5g46580, chloroplastic-like OS=Cuc...	[more]

BLAST of CcUC10G187800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46580.1	1.6e-286	66.81	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G16390.1	5.5e-125	38.54	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G18900.1	7.8e-47	23.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.2	7.8e-47	23.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.3	7.8e-47	23.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 299..411 e-value: 1.8E-27 score: 97.9 coord: 412..525 e-value: 1.5E-24 score: 88.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 118..286 e-value: 2.6E-20 score: 74.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 220..530
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 209..267 e-value: 4.7E-8 score: 33.0 coord: 454..500 e-value: 0.006 score: 16.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 327..361 e-value: 1.7E-9 score: 35.2 coord: 469..501 e-value: 1.5E-5 score: 22.8 coord: 257..290 e-value: 6.6E-5 score: 20.8 coord: 398..431 e-value: 4.6E-6 score: 24.5 coord: 222..256 e-value: 7.2E-6 score: 23.8 coord: 363..395 e-value: 3.3E-5 score: 21.8 coord: 434..467 e-value: 1.7E-5 score: 22.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 324..369 e-value: 6.5E-11 score: 42.3 coord: 397..440 e-value: 2.1E-8 score: 34.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..324 score: 9.152743
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 360..394 score: 9.799459
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 466..500 score: 9.930995
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 431..465 score: 10.55579
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 255..289 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 11.027125
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 395..429 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 12.75901
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..98
None	No IPR available	PANTHER	PTHR47447:SF3	OS03G0856100 PROTEIN	coord: 28..704
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 28..704
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 614..697 score: 9.984114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G187800.1	CcUC10G187800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding