CcUC10G187710 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187710
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	AT-hook motif nuclear-localized protein
Location	CicolChr10: 1683536 .. 1693470 (+)
RNA-Seq Expression	CcUC10G187710
Synteny	CcUC10G187710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACCCTAAAAAACAAAACCCATTTCGCGGTTCTCTTTCTCTTCCCTTCCCGTGTCTGTTCAGTCGTCACTCATCACTGATCGAACAAAGCAAATACCCAAATTCACAACACGAATCATTGAACCAACAATTTCCCATTTCCATTTTTCCTTCCAAATTCCAAACAATCAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGAAAGGATCTCCTTTCTTCCCACATTCCCCCAATCTGATTTTCCCCCCATGGATTCACGGGAGAGGTCGATGCCTTCTGTTCATCAACATCAGCCACAATCCACTCCCCCTAACAGGATGATCCCCAACGCTTCTTATTCCACTAATTTGCCCAATTCCAACAATACTTCCCCTTTGATCAACCCCAATTCCGCTGCTGCTCAGATGATGTCTTCTGCTTCCCGATTTCCCTTCAACTCCATGATGGGTTCCTCCTCTAAGCTCTCCGAATCTCCCAATGCGGCTTCTTATGATGGATCGCAGTCTGAATTGCGCACTGGTGGCTTTAACATTGATTCTGGGAAGAAGAAGAGAGGCCGTCCCAGGAAGTATTCCCCTGATGGGAACATCGCCTTGGGTTTATCCCCAACCCCTATCACTTCTTCCGCCCTTCCTGGCGATTCCGCCGGCATGAACTCCCCGGATCCTCGCCCTAAGAAGAACAGGGGACGGCCGCCCGGTACAGGGAAGAGGCAGATGGATGCTTTGGGTACTCATCCTTTTTTTTTTTTTTTTTCTTTTTTTCCCTTTTTCTGTGTGCCTTGTGTAATGGTGTTGGCCGGGTGGACAGGGACTGGTGGTGTTGGCTTTACTCCTCATGTCATTCTTGTGAAACCAGGAGAGGTAAAGAAATTTGCTTTCTTTTGTGTATATTATATTGCTGTTGAATTTGATTTGATGTTATTCTGTTTTCTTTTTCAACTTTTATTATCTATTCAGTGGTATTCAGTTCTGGTTATTTCCTCTGTCGATTGTTTGGGCTTCTTCTATTAGTAGTTCATTCAATGAAGTATCTGGGAGCTTGTTGATTTAAGATTAGAAGTCAAGATTCTACAATATTGGATGTGTAAATCTGTGTGTTGTATATGTCTGTTCCATTCATTGATATTCCCTGGGGGCTGTTTTTTGTTGTCACTCCCTTGTGCATAGCACTTGTACTGTCGTAATGTTACTCGTTTTGATAGAAAAAAGAAAAAATAATAATTAAAAAATAAGGAGAGAAAGGAACACAGATGAGGAAGAATTGCAGTTGAGTGTAGTTGGTGTATAATAAAAAGGAAGAATACATCACAGCATAAAGAGTTATGAACATCTTTTTGTGGAAAATAGATAAGGTAATTTCCTTGGTATGCTCTTCTCGCACCTTTACATTTTTGATAACATGACAATGGCATGATACTGATTTTTTGAATTTTCTGCTGGTTTACATTTTCTCTTACTTTCAAGAGTACAAAGCCCCTGGATTCTGAGACCTAAGAATGCTTCAATTTTAAGTTTAGATGTACACACTCTATCAATGAAGCAAAGGTAAGAGAAAGTGGGAACAATATACGATTATATGGAAAGTTTTCAGGGTTTTGATGCTTAAAATTGGGATTATTTTGCAAATTCTTTAAACACCTTTTTGGACTTTTTCTTTTGAAGTTTACATATTTTAATGGATATTTATTGTTTCCTAGCATCCGTATGTTTTCTCCATGCTGCAAAAAACTTGTGCTAGCAAGTTTCACTAATAATTGATTCAAATAAGTAGTTAACTGTGCTATGATTTCTTGAGCTGCCCATACTTGCATAATCGAGCTGAATTGGTTTTAGCTGAATCCAAGTTAAGAATTTTAACTATTTCACCCTATTCTTTAGTCTTAGGAAGCTATAACAAATATCTCTGTGAGAACAGACTTGCCCCAGGCAGATGATTAGTGTAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGTCAAACTGTTATATTTCTCATTTAAAAGCGTAGTTGACGTTCCTCTTTTGGTTCTGCAATGAATTGGATCAACGATTTCTAAAGTTCAATATTGTGATTTCTTGCCATTTTTAAGATCTAATATTAATATTTGATTGTCCAAGTCAAAACCGTTTCCTAAACCTGGATTCAGAGTGGAGCTTTGTTATGAACTGTAAATGTTGATGGGAGATCCGTTTCGATTGAAATTAGGCTCGAGCATTAGAAGCTGCTTTTGGGGAGACTCTTCATCAGTCAACAGCCTCTTAAGTTGGTGTTTGCAAGATTTTTCAACATTGTAGAGCCTAGAATTATGTGGTGCGAGGGAGGAGGCTGGTCTATTCGTTGGAGGAGAATTTTGATTGTTCAGGAAATAGAAAAATGACTATCCTTGAAGGAGTTTTTCAGGAACTTTCTAGTTCAGTCTGGTTTGGTTCTATTACTTGGTCTTTTGCTAAATCTGGCTTTTCCATTTACCAAGAGAGATCATTCTTCTTTAAGACATCAAAAAAGCTATTTGGCATCAAAATACCACAAGAAAGTGAAATTCTTTACATGGTATCTGACTCTTCATGGGTACGGATATTATATCTTTTGCTTGTGTCATCCTTGTTGCCAATTGCTTTGTTTTCATGGTAGGATGTATCTGAGAATGCTCTGTCTCAGATGAAAAGTCTAAATGTAGGGAACAACTTAGTGAACTTTTTAGTTTGTTTTGGTTGTAGACTCCCCCTTGGTAGTGCCAATCAATTTTTTTTAAGGAACCCCTTTGAAAGAGAAAACTAAAGCTCATCTTTGAGAGGAAAAAAAGAAAAAAAAAAGCTCCTCTGTGTGGTTTGGATGGAGAGAAACAGAAAATTTAAGTTTCTAATGGTGTCCTCTGCGTTAGATTGTAATCACCTCTTTTGCTTTTCTGATATTTTAAAAAAATGCTGTTCTTTCTTTCTTTAAACCTTTATGAAAATGGATCTGTTCAGGAAGGCAAGAAAGGTAAGGCCTTCAATCCTTTTTTGTTGATCAGCTTCATATTTTTATGATTTTATTTGTGTAACTTGTTAAGTATGAAGATCCATCATAACATATTGTCTGACAATCTAGCAATGTTATCTGAAAATATGTCCTCTTTTTTATTTTTTGGATGGTTGTGAGTGCTTGGGCAAGCTTGCTCACACGTCTTGCTCACACGTCCACATTGTTCTGATGCCAAATTTGGAGATATTAGCTGATGCCTTATTTCCCTCACCATTTTACTTTATAGGAATGAATTTTGAGGTTTCCTCTTAAAAGAAAAAAAAAAAAATCTATGAATACTATCTAGCGGCCACCAGTTAATTGAAATGATGGTGTTTCACTTTTAAGACTGATAGGATCATTCATAAATATAGTTTTGTCAGTCAAACCATATATCGAGACATTTTTGAATTCAGCACTTAAAAGCATTTACACTAATCATCTTTCGGGCATTTTCTGCTCTTGACCTTTCCTGCAATGAATTAGGATTTTAGAGTAGTTTTCCACGGTATAGACTTGTGTGCTATTGAATGTGTTTTCATGGTTTATTCCCCCTCCTTAATACGGATATGGATTTATAAGTTTGAAGGTTAATCAATACCTGTTTTAAAAAGATGCCTTTTCATGGATTGCAGGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGGGGCCACGGACTGTTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACACTTCAACCTGCAATGTCAGCTGGTAGTGTGTCATACGAGGCAAGTTTTTAATTTTCCTCAATTGACTTTGGAGAATTGTAGTCATCAAGTGATATCAGACTTGACATTGTTTACTGCACATTCTAACACATCAACTTCCAAAACGTAGAAGGATCCATGTGAGAGTTTTGCATAAGCTTATCTGCACGCACGTCATATTCTTGTTTATCATTGCTTGTCATCCCGCCTCTACTCTTGATCTTGGTTTTCCTTTGGAGTGTGAGAGTCACTTTACATCAAACGCTTGTACAGTGTAGCTCAGGCTAGCTATTCCATTCCTGCGTGTACTATCTGCCTCTCTAACCTTCTTGGCGTCTTTTTTCTTCATTATTTTCATTTGTTAAAGTCATGTTTGTTTTTGCTTTTCAATTTAATTGGTTACACTTTGCCCTATACTATGCTGATGAAAAGTAAAGCTCTGGCCTTTTACAGACATTGTTATTTCCATGAACTATACAGAGAAGATGCACGTTTCTTCTAAACAGTTCTTGTCGTGAATTTTTAAAGGAGTTGATATTTCCAAGTAAAGAACGGAACATCCTGATAACTTAATTAATCAGTGGTAGGTTGTTCTAGAACATAGTGAGTGCATGCTGTTGGTGACCCCTGACCGGCAGTTCATGCTTATCTACATGGAGGTTATGGTAATCTCCTCTGTTTGTAAGATGTGCTAGTGCTAGTACTTGTAATATGTTTCATCTGCTTCTTCCAAGCCTCTTAAAAGAAGAACAAGGTAGCGTTGATCATTAAAGGATTTTAGCCTTGTTCCTGAAGATGTGACTTAAAGGTGGTTGGAGTAAGAGTCCCCTAGGTTTTTGGGAGCCCACCAGGAGAGATTGAAGGTAGAGGTCAAGCTGTATTGCAAAGCAGTGGCAAGGGGGCAGGGTATAAACAAGCGTTGGTTATTTTCACTCTTGTTCTTACATAGCACACACGACTGACTGGGGGCTGACAACAGTTAAGCTTCCTTTATTTTCAGCCTGAGGTATTGAGTTTACTGTAGTACAATAACTGAGCAAAGACTTTGATCTTCTAAGGATATTGATGTCTTTTTAACTTTATTGGGAGAAGGATGGTTCTTGGTGAGAAAATAGGGCAGCAAGAGAACAGAATAGAACTTCCAAGATTTGATGATTTGAAATCTGCAACCTGACTGTGGAAAAAAATTTCTGGCCCTAGATAGTAGGAAAAAGTAATTAGAGGTAAGATTCGATTGGTCATCATTCTTCTTCAGCATCTGCTTTTTTATTAAAAGAAAAAATTAACCATCAAATTTTTTTATTAATTTGTTTGTATGTGCAAAAGAGGAGGAGAAAGGGTTAAGGGAATTACCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAACAATGACGAAGAGTAAGTCCTGGGTGCAGCTTTGTAATAAGTTTAATTTGAGTGTGCTTCCACAAGGATATCATATTTGTCTTCCTGCGATTATTTCAGGCAGATGACCATCTTGACTTCTTAGTATAAGAGTCATTCCAAATTCACTTGCAACAGTGAAGGACTTGAGATTTTATGGCAGTATCTTTAAGGAGAGAGGCTTGACTATTTACTGATGTAATTTTAGAGCCAAACTATTTATCTTGAGTCAAGTTAAGGCGGGGGTCAGTTATGAGATCCATGAGGCAGATCCACTCTGCAATTTCTTGGTCACACAAGTTTCTTCTTTGGGGAGTATTTATTTCTTTAGATATCAAATCTTAGATAGAAACAGAAAGTAGGTACTACAAAAGTTCTTTCTTTATTTAAAAAAGTACAATAATAAATATTATTGAACTCCATTTTGACTGAGCTCCAAAGAGAGGCCACATTCTTTTTTGGGTTAAAAAAATCAATATTTTTTTCTTATTAGAAAAAAGTTTCATCCTTTTCCAATCTCCCATAAGGTAATCACTATTGGATTCATTCAAATAATCTGATTTAATAGATAATATTTCTGATTACTACATGTCCGAGACTGCAGAAAATTGGTAATGCAACTATTGAGCTGCAGAGGTTATCTGTGTTAGATGTTAAACTGTTTCCACCCCTTGAAGATTTTGAACTTGGGTATGACAAAAAAGTTCCGGTTGGATCATTTCAAGGAATTATGAATACTGCTCTGTTTTACTACTCTCTTTCACGTGAAAAAAGTGATGCTTTGACAAGAGGGTCATATTCCATAGGTTGCATCTGAGAATGCATTGTCCAACTAGCGCTCAGTCATTATTTTAAAAGGAAAGTTAAGGTGCTTTCGTTGAATGGTACTACTGCCATGCTTTAGAATATTTGAATGCAAGAAACAGAAGAATGTTTCAAGTGATTGATATACTTAGGGATGAGCTTTGGGACTGATATTCCTATAGCCTCTTCTGAGTATATTTCTTTGAACTCTTTTGCAATTATTCTATTTATTATTGCCAACCGGCAAGCTTTTCATATCCTATTAGCTTGATTTTGATCGTGAAGGTTTCAACTTTTTGCACATCTTATTTGTCAATTAAATATGTTTCAAGCAAAGAACGGAAAAAAAAAAAAAAAAAGAAGAAAATTTCTCAACACAGTTCTTTTTTAATGAACATAAGCATTTGTTCTGCACCACTAAAACCTCAAAAAGTTTCTATTGGTTGTCCTGACTCATAAGCCTGAAAATCTGGGGGAAAAATAACCTATTCTAGCTGTAGTCTACCCAAACCTTAAAAAAGAAAAAAAGTCTGTTGGTGGTCTTGATTCATTAGTCCTGAAAAACAAAGGAAAAAGATCTATTCTATCTGTATTGTTTCCTTTGTACACAAGGTATCACCAAATTCTATTGCTTTTAAATCTTATGCAGGGCCGCTATGAAATCATATCTCTATCAGGTTCCTTCTTGATTTCTGACAATAATGGTAATCGGAGTCGAAGTGGTGGTTTAAGTGTGTCTCTAGCAAGCGCAGATGGACAAGTTCTTGGTGGAATTACCAACATGCTAACAGCAGCATCGACAGTTCAGGTACTAGCCTTCCTTACTGTCTACTAGAAAGTTGTGTGTGTTAGCTTCACATCGTGTTGATATTTCCCTTTTTAGATGGATTGAATGTTCTTTTCTTAGTTGCATAATTTACTGGCTGATTGTAAAATTTGGCAATACCAGAGGAGAAACAAAAATAAGTTGGTTTTTGTGCCTCAAACCATGTCTTTGGTGCAAAATCAGGTTATAGTCGGTAGCTTTCTTGTGGATGGGAAAAAGCTAGGAGCGAGTATACAGAAATCTGGGCCATCTTCTACATCTCCCAATATGTTGAACTTTAATGCACCCGTGGCAACAGGCTGCCCATCTGAAGGTGCATCAAATAATTCATCCGATGACAATGGTGGTAGCCCTTTAAGCCGGGGGCCTGGAATCTACACCAATGCCAACCAACCAATGCATAATATGCAGATGTATCAACTATGGGGTAGCCGAAATCAATAATGCCCAACTTAACAGTGTAGTGCATTGGGTGTCGAAGTGGTTTAGTGTTTTGCATCCCGATGTATAGAGGTTAGTTCTGGATTCTGTCCCTAACATCCATTGCGCAAACCCCGTATCATAACTTTTCTAGATTAGATTCTCTGTTGATCTTTTAGCTGCTGGTTAGCTTTATTTCTAGTCAGTCCAAATTGTCTACTTTAACATTTATCCATGAATGTGGAATTTCTGAAGATTATGGTAAATCGTATCGTTTGGGATGTCATTACTAAAGAGGGTAAATCTTCAATTCTCCTTTTCTCAAAATTAGGGACAATCAAATGCATCCAAAGATGCATTTTCGAATCCATAGTCAGTACCATTAGTTTTGACCTCTTGTGGCTTCTTGTGTCATTCTTTACTCGGAAAAGTCATGAAGTTGAGTTGACACGATTATTCATGGAACTATATGTTGAAATCAAGGTTGGTTCAACTAGTTCTTATTGTTAAGATCATTTTCAAGAGAGCAATGAAAGAAGAGATGAAAGTAGATCAATGTCTGTGAGTTGTCTTCGCTTTTTCAATTGCTTTGGATTTTATTGCGCTGAAATAGGGTGATTCTGTGATCTGTGGGAATTATGAACTGTTTTCTGAAATTTTCTTTGCAATGTTTACAAAAGCCCATAAGTAGTTTGAAGAGGGAGGGGAAAGATTTGCAACTATTAAACACTTTGACAGGAGAGACCATTTGCATGTCTTCACTGGAATTTTTCTTCTTTATTTCTTATAGCGCTACTTAGGTTCCTGAATGTAGCTGCATTTAGAGTATATTTTGTGTAAACTTCAAAATTAATTTGTGGAGACTGTTTTCTTTTCCATTTTTAGTCAACCATTAAATTCTGCTGGTTGAAGGTTAAGGAAGCCAATAAAGCTGACAAAAAGGCATTTCAATGGTTATCAATGGCAAATGAATTATTAAGTACAAAAGAAGGGTAGAAAGGATTATGCCAAACAGAGGGAAACAAAATGGGCTAAAACCCACATTTGCTCCTAATCTTGTTCCTTCTTTTAAAAAATTTGGAGTTTTATTGTTATTATTCTCTCATGGAATATTTGATTTCATAATCTATCTGAATGCCTCATCCTAATGAATGCCTCTTATTTTAGATCAAACTTTAATATAATGTGAAGACATTGAAAGTTTATATAATATATATAGGAATGATACTTGAGTTTTGAAAAGTAGATTAACTATTTTAAAAATGAACAAAAATATTGAGTTTGACATGCAATATAAACACTGCAGGAAGCTCTCGAAGAAACGACGAATTACTATGGCCATCCATCATATATCATATTCTGTCTTATCATTTGCATATTATTTGCTACTGACCCTATTAGACTTGTAACATTTGTATTTGAAATCAGTACTAAACACAATTTCAGTAGATGGCTCCCTAATCGTGTACCAATTGTATGCCGAACGTAGACGTTCCCTATTATGTATGTCATTTTGTACCGAGCTAATGAGTTTCAGGTCAACTTGAGTAACAATGGTCACATGATAATAATTTTCTTTTTTTTT

mRNA sequence

CTAAAACCCTAAAAAACAAAACCCATTTCGCGGTTCTCTTTCTCTTCCCTTCCCGTGTCTGTTCAGTCGTCACTCATCACTGATCGAACAAAGCAAATACCCAAATTCACAACACGAATCATTGAACCAACAATTTCCCATTTCCATTTTTCCTTCCAAATTCCAAACAATCAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGAAAGGATCTCCTTTCTTCCCACATTCCCCCAATCTGATTTTCCCCCCATGGATTCACGGGAGAGGTCGATGCCTTCTGTTCATCAACATCAGCCACAATCCACTCCCCCTAACAGGATGATCCCCAACGCTTCTTATTCCACTAATTTGCCCAATTCCAACAATACTTCCCCTTTGATCAACCCCAATTCCGCTGCTGCTCAGATGATGTCTTCTGCTTCCCGATTTCCCTTCAACTCCATGATGGGTTCCTCCTCTAAGCTCTCCGAATCTCCCAATGCGGCTTCTTATGATGGATCGCAGTCTGAATTGCGCACTGGTGGCTTTAACATTGATTCTGGGAAGAAGAAGAGAGGCCGTCCCAGGAAGTATTCCCCTGATGGGAACATCGCCTTGGGTTTATCCCCAACCCCTATCACTTCTTCCGCCCTTCCTGGCGATTCCGCCGGCATGAACTCCCCGGATCCTCGCCCTAAGAAGAACAGGGGACGGCCGCCCGGTACAGGGAAGAGGCAGATGGATGCTTTGGGGACTGGTGGTGTTGGCTTTACTCCTCATGTCATTCTTGTGAAACCAGGAGAGGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGGGGCCACGGACTGTTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACACTTCAACCTGCAATGTCAGCTGAACATAGTGAGTGCATGCTGTTGGTGACCCCTGACCGGCAGTTCATGCTTATCTACATGGAGGTTATGAAAATTGGTAATGCAACTATTGAGCTGCAGAGGTTATCTGTGTTAGATGTTAAACTGTTTCCACCCCTTGAAGATTTTGAACTTGGGTATGACAAAAAAGTTCCGGGCCGCTATGAAATCATATCTCTATCAGGTTCCTTCTTGATTTCTGACAATAATGGTAATCGGAGTCGAAGTGGTGGTTTAAGTGTGTCTCTAGCAAGCGCAGATGGACAAGTTCTTGGTGGAATTACCAACATGCTAACAGCAGCATCGACAGTTCAGGTTATAGTCGGTAGCTTTCTTGTGGATGGGAAAAAGCTAGGAGCGAGTATACAGAAATCTGGGCCATCTTCTACATCTCCCAATATGTTGAACTTTAATGCACCCGTGGCAACAGGCTGCCCATCTGAAGGTGCATCAAATAATTCATCCGATGACAATGGTGGTAGCCCTTTAAGCCGGGGGCCTGGAATCTACACCAATGCCAACCAACCAATGCATAATATGCAGATGTATCAACTATGGGGTAGCCGAAATCAATAATGCCCAACTTAACAGTGTAGTGCATTGGGTGTCGAAGTGGTTTAGTGTTTTGCATCCCGATGTATAGAGGAAGCTCTCGAAGAAACGACGAATTACTATGGCCATCCATCATATATCATATTCTGTCTTATCATTTGCATATTATTTGCTACTGACCCTATTAGACTTGTAACATTTGTATTTGAAATCAGTACTAAACACAATTTCAGTAGATGGCTCCCTAATCGTGTACCAATTGTATGCCGAACGTAGACGTTCCCTATTATGTATGTCATTTTGTACCGAGCTAATGAGTTTCAGGTCAACTTGAGTAACAATGGTCACATGATAATAATTTTCTTTTTTTTT

Coding sequence (CDS)

ATGGATTCACGGGAGAGGTCGATGCCTTCTGTTCATCAACATCAGCCACAATCCACTCCCCCTAACAGGATGATCCCCAACGCTTCTTATTCCACTAATTTGCCCAATTCCAACAATACTTCCCCTTTGATCAACCCCAATTCCGCTGCTGCTCAGATGATGTCTTCTGCTTCCCGATTTCCCTTCAACTCCATGATGGGTTCCTCCTCTAAGCTCTCCGAATCTCCCAATGCGGCTTCTTATGATGGATCGCAGTCTGAATTGCGCACTGGTGGCTTTAACATTGATTCTGGGAAGAAGAAGAGAGGCCGTCCCAGGAAGTATTCCCCTGATGGGAACATCGCCTTGGGTTTATCCCCAACCCCTATCACTTCTTCCGCCCTTCCTGGCGATTCCGCCGGCATGAACTCCCCGGATCCTCGCCCTAAGAAGAACAGGGGACGGCCGCCCGGTACAGGGAAGAGGCAGATGGATGCTTTGGGGACTGGTGGTGTTGGCTTTACTCCTCATGTCATTCTTGTGAAACCAGGAGAGGACATTGCCTCAAAAGTTATGGCATTTTCACAGCAGGGGCCACGGACTGTTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACACTTCAACCTGCAATGTCAGCTGAACATAGTGAGTGCATGCTGTTGGTGACCCCTGACCGGCAGTTCATGCTTATCTACATGGAGGTTATGAAAATTGGTAATGCAACTATTGAGCTGCAGAGGTTATCTGTGTTAGATGTTAAACTGTTTCCACCCCTTGAAGATTTTGAACTTGGGTATGACAAAAAAGTTCCGGGCCGCTATGAAATCATATCTCTATCAGGTTCCTTCTTGATTTCTGACAATAATGGTAATCGGAGTCGAAGTGGTGGTTTAAGTGTGTCTCTAGCAAGCGCAGATGGACAAGTTCTTGGTGGAATTACCAACATGCTAACAGCAGCATCGACAGTTCAGGTTATAGTCGGTAGCTTTCTTGTGGATGGGAAAAAGCTAGGAGCGAGTATACAGAAATCTGGGCCATCTTCTACATCTCCCAATATGTTGAACTTTAATGCACCCGTGGCAACAGGCTGCCCATCTGAAGGTGCATCAAATAATTCATCCGATGACAATGGTGGTAGCCCTTTAAGCCGGGGGCCTGGAATCTACACCAATGCCAACCAACCAATGCATAATATGCAGATGTATCAACTATGGGGTAGCCGAAATCAATAA

Protein sequence

MDSRERSMPSVHQHQPQSTPPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRFPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSPTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFNAPVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMYQLWGSRNQ

Homology

[Close]

BLAST of CcUC10G187710 vs. NCBI nr
Match: XP_038904793.1 (AT-hook motif nuclear-localized protein 13-like [Benincasa hispida])

HSP 1 Score: 634.8 bits (1636), Expect = 5.2e-178
Identity = 350/414 (84.54%), Postives = 354/414 (85.51%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQHQPQSTPPNRMIP NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHQPQSTPPNRMIPNNASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+PGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAM+A                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMAA------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G  + E                           GRYEIISLSGSFLISDNNGNRSRSGG
Sbjct: 241 -GTVSYE---------------------------GRYEIISLSGSFLISDNNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF+
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFS 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPM-HNMQMYQLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPM HNMQMYQLWGSRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHHNMQMYQLWGSRNQ 362

[Close]

BLAST of CcUC10G187710 vs. NCBI nr
Match: KAG7015742.1 (AT-hook motif nuclear-localized protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.5 bits (1604), Expect = 2.7e-174
Identity = 334/416 (80.29%), Postives = 357/416 (85.82%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRF 60
           MDSRERSMPSVHQH  QSTPPNRM+ NASYSTNLPN+NN+S +INPNSAAAQ+MSSASRF
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF 60

Query: 61  PFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSP 120
           PFNSMMGS+SK S+SPN ASYDGS SELRTGGFNIDSGKKKRGRPRKYSPDGNIALGL+P
Sbjct: 61  PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120

Query: 121 TPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGEDI 180
           T IT+SA+PGDS+GMNS DPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILV PGEDI
Sbjct: 121 TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI 180

Query: 181 ASKVMAFSQQGPRTVCILSAHGAVCNVTL-QPAMSA---EHSECMLLVTPDRQFMLIYME 240
           ASKVM+FSQQGPRT+CILSAHGAVCNVTL QPA  +    H+ECM+LVTPD  F LIYME
Sbjct: 181 ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSLVLVHNECMVLVTPDLPFGLIYME 240

Query: 241 VMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSR 300
                                              + GRYEIISLSGSFLISDNNGNRSR
Sbjct: 241 -----------------------------------IKGRYEIISLSGSFLISDNNGNRSR 300

Query: 301 SGGLSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNML 360
           +GGLSVSLASADGQVLGG+TNMLTAASTVQVIVGSFLVDGKKLG +IQKSGPSSTSPNML
Sbjct: 301 TGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSPNML 360

Query: 361 NFNAPVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMYQLWGSRNQ 413
           NFN PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMYQLWGSRNQ
Sbjct: 361 NFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 381

[Close]

BLAST of CcUC10G187710 vs. NCBI nr
Match: XP_004148734.1 (AT-hook motif nuclear-localized protein 13 [Cucumis sativus] >KGN55770.1 hypothetical protein Csa_010123 [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 4.2e-172
Identity = 339/414 (81.88%), Postives = 349/414 (84.30%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSS------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G+ + E                           GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 -GSVSYE---------------------------GRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 362

[Close]

BLAST of CcUC10G187710 vs. NCBI nr
Match: XP_008448696.1 (PREDICTED: AT-hook motif nuclear-localized protein 13 [Cucumis melo] >TYK11503.1 AT-hook motif nuclear-localized protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 614.0 bits (1582), Expect = 9.5e-172
Identity = 338/414 (81.64%), Postives = 349/414 (84.30%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSS------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G+ + E                           GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 -GSVSYE---------------------------GRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 362

[Close]

BLAST of CcUC10G187710 vs. NCBI nr
Match: KAA0053048.1 (AT-hook motif nuclear-localized protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 610.5 bits (1573), Expect = 1.0e-170
Identity = 336/414 (81.16%), Postives = 345/414 (83.33%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSSG----------------------- 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
                                             GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 ---------------------------------SGRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 358

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 358

[Close]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot
Match: Q940I0 (AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AHL13 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-49
Identity = 174/468 (37.18%), Postives = 236/468 (50.43%), Query Frame = 0


Query: 4   RERSMPSVHQHQPQSTPPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRFPFN 63
           +++     H  Q Q  PP  ++ + +     PN+   + L+  N++ +Q M    R PF 
Sbjct: 18  QQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNA-AAAVLMGHNTSTSQAMH--QRLPFG 77

Query: 64  SMMGSSSKL--------------SESPNAASYDGSQSELRTG-------GFNIDSGKKKR 123
             M                     ++  +  +DGS S +          G +    KKKR
Sbjct: 78  GSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKR 137

Query: 124 GRPRKYSPDG--------NIALGLSPT-PITSSALP----------GDSAG--MNSPDPR 183
           GRPRKY+ DG        NIALGL+PT P+ S++            GDSAG   NS DP 
Sbjct: 138 GRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDPP 197

Query: 184 PKKNRGRPPGTGKRQMDAL-GTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSA 243
            K+NRGRPPG+GK+Q+DAL GTGGVGFTPHVI VK GEDIA+K++AF+ QGPR +CILSA
Sbjct: 198 AKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILSA 257

Query: 244 HGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPP 303
            GAV NV L+ A ++  +  +                                       
Sbjct: 258 TGAVTNVMLRQANNSNPTGTV--------------------------------------- 317

Query: 304 LEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNML 363
                     K  GR+EIISLSGSFL S++NG  +++G LSVSLA  +G+++GG +  ML
Sbjct: 318 ----------KYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGML 377

Query: 364 TAASTVQVIVGSFLVDGKK----LGASIQKSGPSSTSPNMLNFNAPVATGCP-SEG---A 408
            A S VQVIVGSF+ DG+K     G +     P+S   NML+F      G P S+G   +
Sbjct: 378 VAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHS 433

[Close]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot
Match: Q9FIR1 (AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL8 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-49
Identity = 185/451 (41.02%), Postives = 228/451 (50.55%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMI-----PNASYSTNLPNSNNTSPLINPNSAAAQMMS 60
           MDSR+   PS +Q QP   PP  ++     PNA+ S  +  ++ + P+ +P         
Sbjct: 1   MDSRD-IPPSHNQLQP---PPGMLMSHYRNPNAAASPLMVPTSTSQPIQHPRLPFGNQQQ 60

Query: 61  SASRFPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSG------KKKRGRPRKYS 120
           S + F          K  ES        S   +R   F ID        KKKRGRPRKY+
Sbjct: 61  SQT-FHQQQQQQMDQKTLESLGFGDGSPSSQPMR---FGIDDQNQQLQVKKKRGRPRKYT 120

Query: 121 PDGNIALGLSPT-PITSSAL-------PGDSAGM-NSPDPRPKKNRGRPPGTGKRQMDAL 180
           PDG+IALGL+PT P+ S+A         GDS G  NS DP  K+NRGRPPG+ K+Q+DAL
Sbjct: 121 PDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQLDAL 180

Query: 181 -GTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSE 240
            GT GVGFTPHVI V  GEDIASKVMAFS QG RT+CILSA GAV  V L+    A HS 
Sbjct: 181 GGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSASGAVSRVMLR---QASHSS 240

Query: 241 CMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEII 300
                                G  T E                           GR+EII
Sbjct: 241 ---------------------GIVTYE---------------------------GRFEII 300

Query: 301 SLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLVDGKK 360
           +LSGS L  + NG+ +RSG LSV+LA  DG ++GG +   L AA+ VQVIVGSF+ + KK
Sbjct: 301 TLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQVQVIVGSFVAEAKK 360

Query: 361 LGASI------QKSGPSSTSPNMLNFNAPVATGCPSEGASNNSSDDN-GGSPL---SRGP 413
              S       Q   P+S   NMLNF      G  S+G S+ SS++N  GSP        
Sbjct: 361 PKQSSVNIARGQNPEPASAPANMLNF------GSVSQGPSSESSEENESGSPAMHRDNNN 386

[Close]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot
Match: O22812 (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-38
Identity = 119/301 (39.53%), Postives = 160/301 (53.16%), Query Frame = 0


Query: 99  KKKRGRPRKYSPD-GNIALGLSPTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKR-- 158
           KK+RGRPRKY PD G ++LGL+P   + +     S G        +K RGRPPG+  +  
Sbjct: 97  KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG-----EKKRGRPPGSSSKRL 156

Query: 159 QMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSA 218
           ++ ALG+ G+GFTPHV+ V  GED++SK+MA +  GPR VC+LSA+GA+ NVTL+ + ++
Sbjct: 157 KLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATS 216

Query: 219 EHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGR 278
                                    G  T E                           GR
Sbjct: 217 G------------------------GTVTYE---------------------------GR 276

Query: 279 YEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLV 338
           +EI+SLSGSF + +NNG RSR+GGLSVSL+S DG VLGG +  +L AAS VQ++VGSFL 
Sbjct: 277 FEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 336

Query: 339 DGKKLGASIQKSGPSSTSPNMLNFNAP-----VATGCPSEGASNNSSDDNG-GSPLSRGP 390
           DG+K     Q  G    S  +L   AP       +   S G  + SS   G GSP+ +  
Sbjct: 337 DGEK--EPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQST 339

[Close]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot
Match: Q8GXB3 (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.0e-32
Identity = 136/399 (34.09%), Postives = 187/399 (46.87%), Query Frame = 0


Query: 20  PPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRFPFNSMMGSSSKLSESPNAA 79
           PP  M P ++ + + P ++N  P   P S A    S    F  +  MG +S  +  P   
Sbjct: 40  PPPGMRPMSNPNIHHPQASNPGP---PFSMAEHRHSD---FGHSIHMGMASPAAVQPTL- 99

Query: 80  SYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSPTPITSSALPGDSAGMNSPD 139
                  +L          KKKRGRPRKY PDG ++LGLSP P  S     DS+ M+ P+
Sbjct: 100 -------QLPPPPSEQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKK-SKDSSSMSDPN 159

Query: 140 PRPKKNRGRPPGTGKRQMDA-LG-----TGGVGFTPHVILVKPGEDIASKVMAFSQQGPR 199
             PK+ RGRPPGTG++Q  A LG     + G+ F PHVI V  GEDI SKV++FSQ+ PR
Sbjct: 160 -APKRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPR 219

Query: 200 TVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVL 259
            +CI+S  G V +VTL+   S          TP   F                       
Sbjct: 220 ALCIMSGTGTVSSVTLREPAS---------TTPSLTF----------------------- 279

Query: 260 DVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLG 319
                               GR+EI+SL GS+L+++  G++SR+GGLSVSL+  +G V+G
Sbjct: 280 -------------------EGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIG 339

Query: 320 GITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFNAPVATGC-PSEGAS 379
           G   ML AAS VQV+  SF+             G S+ S N  N N  +     P +  +
Sbjct: 340 GGIGMLIAASLVQVVACSFVY------------GASAKSNN--NNNKTIKQEIKPKQEPT 357

Query: 380 NNSSDDNGGS--PLSRGPGIYTNANQPMHNMQMYQLWGS 410
           N+  +   GS    +   G +T  N P   M  + + GS
Sbjct: 400 NSEMETTPGSAPEAAASTGQHTPQNFPAQGMSGWPVSGS 357

[Close]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-30
Identity = 111/315 (35.24%), Postives = 157/315 (49.84%), Query Frame = 0


Query: 99  KKKRGRPRKYSPDGNIALGLSPTPITS----SALPGDSAGMNSPDPRPKKNRGRPPGTGK 158
           KKKRGRPRKY PDG + + LSP PI+S    S LP  S+ +       K+++ +P  +  
Sbjct: 89  KKKRGRPRKYGPDGTV-VALSPKPISSAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFN 148

Query: 159 R-----QMDALG-----TGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAV 218
           R     Q++ LG     + G  FTPH+I V  GED+  K+++FSQQGPR++C+LSA+G +
Sbjct: 149 RTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVI 208

Query: 219 CNVTL-QPAMSAEHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLED 278
            +VTL QP  S                          G  T E                 
Sbjct: 209 SSVTLRQPDSSG-------------------------GTLTYE----------------- 268

Query: 279 FELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVL-GGITNMLTAA 338
                     GR+EI+SLSGSF+ +D+ G RSR+GG+SVSLAS DG+V+ GG+  +L AA
Sbjct: 269 ----------GRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLAGLLVAA 328

Query: 339 STVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFNAPVATGCPSEGASNNSSDDNGGS 398
           S VQV+VGSFL      G   Q   P     + +  ++P A    S  A + +       
Sbjct: 329 SPVQVVVGSFLA-----GTDHQDQKPKKNKHDFM-LSSPTAAIPISSAADHRTIHSVSSL 344

[Close]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL
Match: A0A0A0L1A5 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011720 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 2.1e-172
Identity = 339/414 (81.88%), Postives = 349/414 (84.30%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSS------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G+ + E                           GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 -GSVSYE---------------------------GRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 362

[Close]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL
Match: A0A5D3CHX0 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001670 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.6e-172
Identity = 338/414 (81.64%), Postives = 349/414 (84.30%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSS------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G+ + E                           GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 -GSVSYE---------------------------GRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 362

[Close]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL
Match: A0A1S3BL68 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490790 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.6e-172
Identity = 338/414 (81.64%), Postives = 349/414 (84.30%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSS------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
            G+ + E                           GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 -GSVSYE---------------------------GRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 362

[Close]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL
Match: A0A5A7UCX6 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001640 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 5.1e-171
Identity = 336/414 (81.16%), Postives = 345/414 (83.33%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIP-NASYSTNLPNSNNTSPLINPNSAAAQMMSSASR 60
           MDSRERSMPSVHQH  QSTPPNRMIP NASYS N+PNSNNTSPLINPNSAAAQMMSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120
           FPFNSMMGSSSK SESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180
           PTPITSSA+P DSAGM+SPDPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPA+S+                        
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTLQPALSSG----------------------- 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
                                             GRYEIISLSGSFLIS+NNGNRSRSGG
Sbjct: 241 ---------------------------------SGRYEIISLSGSFLISENNGNRSRSGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNF 
Sbjct: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFG 358

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMY-QLWGSRNQ 413
            PVA GCPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMY QLW SRNQ
Sbjct: 361 TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWASRNQ 358

[Close]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL
Match: A0A6J1CWB5 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111014887 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 4.4e-167
Identity = 324/413 (78.45%), Postives = 346/413 (83.78%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRF 60
           MDSRER +PSVHQ QPQSTPPNRM+PNASYS+NLPN+NN+SPL+NPNSAAAQMMSSASRF
Sbjct: 1   MDSRERPLPSVHQPQPQSTPPNRMMPNASYSSNLPNANNSSPLMNPNSAAAQMMSSASRF 60

Query: 61  PFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSP 120
           PFNSMM S+SK SESPNA SYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGL+P
Sbjct: 61  PFNSMMPSASKPSESPNAGSYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120

Query: 121 TPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGEDI 180
           TP+ SSA+PGDS GM+SP+PRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILVKPGEDI
Sbjct: 121 TPMASSAVPGDSGGMHSPEPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGEDI 180

Query: 181 ASKVMAFSQQGPRTVCILSAHGAVCNVTL-QPAMSAEHSECMLLVTPDRQFMLIYMEVMK 240
           ASKVMAFSQ GPRTVCILSAHGAVCNVTL QPAM+A                        
Sbjct: 181 ASKVMAFSQTGPRTVCILSAHGAVCNVTLHQPAMTA------------------------ 240

Query: 241 IGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGG 300
             + T E                           GRYEIISLSGSFLISD+NGNRSR+GG
Sbjct: 241 -SSVTYE---------------------------GRYEIISLSGSFLISDSNGNRSRTGG 300

Query: 301 LSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSSTSPNMLNFN 360
           LSVSLASADGQVLGG+TNMLTAASTVQVIVGSFLVDGKKLG+SIQKSGPSSTSPNMLNF+
Sbjct: 301 LSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGSSIQKSGPSSTSPNMLNFS 360

Query: 361 APVATGCPSEGASNNSSDDNGGSPLSRGPGIYTNANQPMHNMQMYQLWGSRNQ 413
           AP A  CPSEGASNNSSDDNGGSPLSRGPG+YTNANQP+HNMQMYQLWGSRNQ
Sbjct: 361 APAAAACPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 361

[Close]

BLAST of CcUC10G187710 vs. TAIR 10
Match: AT4G17950.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-50
Identity = 174/468 (37.18%), Postives = 236/468 (50.43%), Query Frame = 0


Query: 4   RERSMPSVHQHQPQSTPPNRMIPNASYSTNLPNSNNTSPLINPNSAAAQMMSSASRFPFN 63
           +++     H  Q Q  PP  ++ + +     PN+   + L+  N++ +Q M    R PF 
Sbjct: 18  QQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNA-AAAVLMGHNTSTSQAMH--QRLPFG 77

Query: 64  SMMGSSSKL--------------SESPNAASYDGSQSELRTG-------GFNIDSGKKKR 123
             M                     ++  +  +DGS S +          G +    KKKR
Sbjct: 78  GSMSPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKR 137

Query: 124 GRPRKYSPDG--------NIALGLSPT-PITSSALP----------GDSAG--MNSPDPR 183
           GRPRKY+ DG        NIALGL+PT P+ S++            GDSAG   NS DP 
Sbjct: 138 GRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDPP 197

Query: 184 PKKNRGRPPGTGKRQMDAL-GTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSA 243
            K+NRGRPPG+GK+Q+DAL GTGGVGFTPHVI VK GEDIA+K++AF+ QGPR +CILSA
Sbjct: 198 AKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILSA 257

Query: 244 HGAVCNVTLQPAMSAEHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPP 303
            GAV NV L+ A ++  +  +                                       
Sbjct: 258 TGAVTNVMLRQANNSNPTGTV--------------------------------------- 317

Query: 304 LEDFELGYDKKVPGRYEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNML 363
                     K  GR+EIISLSGSFL S++NG  +++G LSVSLA  +G+++GG +  ML
Sbjct: 318 ----------KYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGML 377

Query: 364 TAASTVQVIVGSFLVDGKK----LGASIQKSGPSSTSPNMLNFNAPVATGCP-SEG---A 408
            A S VQVIVGSF+ DG+K     G +     P+S   NML+F      G P S+G   +
Sbjct: 378 VAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGGPGSPRSQGQQHS 433

[Close]

BLAST of CcUC10G187710 vs. TAIR 10
Match: AT5G46640.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-50
Identity = 185/451 (41.02%), Postives = 228/451 (50.55%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHQPQSTPPNRMI-----PNASYSTNLPNSNNTSPLINPNSAAAQMMS 60
           MDSR+   PS +Q QP   PP  ++     PNA+ S  +  ++ + P+ +P         
Sbjct: 1   MDSRD-IPPSHNQLQP---PPGMLMSHYRNPNAAASPLMVPTSTSQPIQHPRLPFGNQQQ 60

Query: 61  SASRFPFNSMMGSSSKLSESPNAASYDGSQSELRTGGFNIDSG------KKKRGRPRKYS 120
           S + F          K  ES        S   +R   F ID        KKKRGRPRKY+
Sbjct: 61  SQT-FHQQQQQQMDQKTLESLGFGDGSPSSQPMR---FGIDDQNQQLQVKKKRGRPRKYT 120

Query: 121 PDGNIALGLSPT-PITSSAL-------PGDSAGM-NSPDPRPKKNRGRPPGTGKRQMDAL 180
           PDG+IALGL+PT P+ S+A         GDS G  NS DP  K+NRGRPPG+ K+Q+DAL
Sbjct: 121 PDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQLDAL 180

Query: 181 -GTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSAEHSE 240
            GT GVGFTPHVI V  GEDIASKVMAFS QG RT+CILSA GAV  V L+    A HS 
Sbjct: 181 GGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSASGAVSRVMLR---QASHSS 240

Query: 241 CMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGRYEII 300
                                G  T E                           GR+EII
Sbjct: 241 ---------------------GIVTYE---------------------------GRFEII 300

Query: 301 SLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLVDGKK 360
           +LSGS L  + NG+ +RSG LSV+LA  DG ++GG +   L AA+ VQVIVGSF+ + KK
Sbjct: 301 TLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQVQVIVGSFVAEAKK 360

Query: 361 LGASI------QKSGPSSTSPNMLNFNAPVATGCPSEGASNNSSDDN-GGSPL---SRGP 413
              S       Q   P+S   NMLNF      G  S+G S+ SS++N  GSP        
Sbjct: 361 PKQSSVNIARGQNPEPASAPANMLNF------GSVSQGPSSESSEENESGSPAMHRDNNN 386

[Close]

BLAST of CcUC10G187710 vs. TAIR 10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-40
Identity = 119/301 (39.53%), Postives = 160/301 (53.16%), Query Frame = 0


Query: 99  KKKRGRPRKYSPD-GNIALGLSPTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKR-- 158
           KK+RGRPRKY PD G ++LGL+P   + +     S G        +K RGRPPG+  +  
Sbjct: 97  KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG-----EKKRGRPPGSSSKRL 156

Query: 159 QMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSA 218
           ++ ALG+ G+GFTPHV+ V  GED++SK+MA +  GPR VC+LSA+GA+ NVTL+ + ++
Sbjct: 157 KLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATS 216

Query: 219 EHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGR 278
                                    G  T E                           GR
Sbjct: 217 G------------------------GTVTYE---------------------------GR 276

Query: 279 YEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLV 338
           +EI+SLSGSF + +NNG RSR+GGLSVSL+S DG VLGG +  +L AAS VQ++VGSFL 
Sbjct: 277 FEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 336

Query: 339 DGKKLGASIQKSGPSSTSPNMLNFNAP-----VATGCPSEGASNNSSDDNG-GSPLSRGP 390
           DG+K     Q  G    S  +L   AP       +   S G  + SS   G GSP+ +  
Sbjct: 337 DGEK--EPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQST 339

[Close]

BLAST of CcUC10G187710 vs. TAIR 10
Match: AT2G33620.2 (AT hook motif DNA-binding family protein )

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-40
Identity = 119/301 (39.53%), Postives = 160/301 (53.16%), Query Frame = 0


Query: 99  KKKRGRPRKYSPD-GNIALGLSPTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKR-- 158
           KK+RGRPRKY PD G ++LGL+P   + +     S G        +K RGRPPG+  +  
Sbjct: 97  KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG-----EKKRGRPPGSSSKRL 156

Query: 159 QMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSA 218
           ++ ALG+ G+GFTPHV+ V  GED++SK+MA +  GPR VC+LSA+GA+ NVTL+ + ++
Sbjct: 157 KLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATS 216

Query: 219 EHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGR 278
                                    G  T E                           GR
Sbjct: 217 G------------------------GTVTYE---------------------------GR 276

Query: 279 YEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLV 338
           +EI+SLSGSF + +NNG RSR+GGLSVSL+S DG VLGG +  +L AAS VQ++VGSFL 
Sbjct: 277 FEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 336

Query: 339 DGKKLGASIQKSGPSSTSPNMLNFNAP-----VATGCPSEGASNNSSDDNG-GSPLSRGP 390
           DG+K     Q  G    S  +L   AP       +   S G  + SS   G GSP+ +  
Sbjct: 337 DGEK--EPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQST 339

[Close]

BLAST of CcUC10G187710 vs. TAIR 10
Match: AT2G33620.3 (AT hook motif DNA-binding family protein )

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-40
Identity = 119/301 (39.53%), Postives = 160/301 (53.16%), Query Frame = 0


Query: 99  KKKRGRPRKYSPD-GNIALGLSPTPITSSALPGDSAGMNSPDPRPKKNRGRPPGTGKR-- 158
           KK+RGRPRKY PD G ++LGL+P   + +     S G        +K RGRPPG+  +  
Sbjct: 97  KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG-----EKKRGRPPGSSSKRL 156

Query: 159 QMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRTVCILSAHGAVCNVTLQPAMSA 218
           ++ ALG+ G+GFTPHV+ V  GED++SK+MA +  GPR VC+LSA+GA+ NVTL+ + ++
Sbjct: 157 KLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATS 216

Query: 219 EHSECMLLVTPDRQFMLIYMEVMKIGNATIELQRLSVLDVKLFPPLEDFELGYDKKVPGR 278
                                    G  T E                           GR
Sbjct: 217 G------------------------GTVTYE---------------------------GR 276

Query: 279 YEIISLSGSFLISDNNGNRSRSGGLSVSLASADGQVLGG-ITNMLTAASTVQVIVGSFLV 338
           +EI+SLSGSF + +NNG RSR+GGLSVSL+S DG VLGG +  +L AAS VQ++VGSFL 
Sbjct: 277 FEILSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 336

Query: 339 DGKKLGASIQKSGPSSTSPNMLNFNAP-----VATGCPSEGASNNSSDDNG-GSPLSRGP 390
           DG+K     Q  G    S  +L   AP       +   S G  + SS   G GSP+ +  
Sbjct: 337 DGEK--EPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQST 339

The following BLAST results are available for this feature:

BLAST of CcUC10G187710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904793.1	5.2e-178	84.54	AT-hook motif nuclear-localized protein 13-like [Benincasa hispida]	[more]
KAG7015742.1	2.7e-174	80.29	AT-hook motif nuclear-localized protein 13, partial [Cucurbita argyrosperma subs...	[more]
XP_004148734.1	4.2e-172	81.88	AT-hook motif nuclear-localized protein 13 [Cucumis sativus] >KGN55770.1 hypothe...	[more]
XP_008448696.1	9.5e-172	81.64	PREDICTED: AT-hook motif nuclear-localized protein 13 [Cucumis melo] >TYK11503.1...	[more]
KAA0053048.1	1.0e-170	81.16	AT-hook motif nuclear-localized protein 13 [Cucumis melo var. makuwa]	[more]

BLAST of CcUC10G187710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940I0	1.6e-49	37.18	AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9FIR1	2.1e-49	41.02	AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O22812	1.3e-38	39.53	AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8GXB3	9.0e-32	34.09	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q8VYJ2	2.2e-30	35.24	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of CcUC10G187710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1A5	2.1e-172	81.88	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G0117...	[more]
A0A5D3CHX0	4.6e-172	81.64	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BL68	4.6e-172	81.64	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490790 ...	[more]
A0A5A7UCX6	5.1e-171	81.16	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1CWB5	4.4e-167	78.45	AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CcUC10G187710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17950.1	1.2e-50	37.18	AT hook motif DNA-binding family protein	[more]
AT5G46640.1	1.5e-50	41.02	AT hook motif DNA-binding family protein	[more]
AT2G33620.1	9.2e-40	39.53	AT hook motif DNA-binding family protein	[more]
AT2G33620.2	9.2e-40	39.53	AT hook motif DNA-binding family protein	[more]
AT2G33620.3	9.2e-40	39.53	AT hook motif DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017956	AT hook, DNA-binding motif	SMART	SM00384	AT_hook_2	coord: 143..155 e-value: 43.0 score: 6.0 coord: 99..111 e-value: 0.21 score: 19.0
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 169..332 e-value: 6.3E-24 score: 84.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 163..354 score: 24.449238
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 168..332 e-value: 1.01566E-21 score: 87.641
None	No IPR available	GENE3D	3.30.1330.80		coord: 169..347 e-value: 5.3E-20 score: 73.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR31500:SF76	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1	coord: 81..215
None	No IPR available	PANTHER	PTHR31500:SF76	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1	coord: 273..408
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 167..211
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 272..333
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 273..408 coord: 81..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G187710.1	CcUC10G187710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding
molecular_function	GO:0003677	DNA binding