CcUC08G148350 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G148350
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor IBH1
Location	CicolChr08: 11371530 .. 11371994 (+)
RNA-Seq Expression	CcUC08G148350
Synteny	CcUC08G148350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACATCCGCCACTATTACCCTCTCTCCCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCTATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAAGCTCCACACGCGACCTACACACAGGACTCTAATGAATACACGCCGTGGTGGCTCCACGACCACACCACCCTCCTCTCGCTCGGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTGTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGGTTATGAAAGCCATATCTGATCATCACTTTTGA

mRNA sequence

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACATCCGCCACTATTACCCTCTCTCCCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCTATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAAGCTCCACACGCGACCTACACACAGGACTCTAATGAATACACGCCGTGGTGGCTCCACGACCACACCACCCTCCTCTCGCTCGGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTGTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGGTTATGAAAGCCATATCTGATCATCACTTTTGA

Coding sequence (CDS)

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACATCCGCCACTATTACCCTCTCTCCCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCTATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAAGCTCCACACGCGACCTACACACAGGACTCTAATGAATACACGCCGTGGTGGCTCCACGACCACACCACCCTCCTCTCGCTCGGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTGTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGGTTATGAAAGCCATATCTGATCATCACTTTTGA

Protein sequence

MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVKVMKAISDHHF

Homology

[Close]

BLAST of CcUC08G148350 vs. NCBI nr
Match: XP_008464343.1 (PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription factor IBH1 [Cucumis melo var. makuwa] >TYK01643.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 3.8e-49
Identity = 115/151 (76.16%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSM 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ SAT   +P    LKRQS+RIKM AYSSM
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPD-QLKRQSQRIKMVAYSSM 63

Query: 63  ARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGGDR 122
           ARVAGPRRAWARALLFKL TRP HRTLM  +R       PS+  D+QVGKLRRLLPGG+ 
Sbjct: 64  ARVAGPRRAWARALLFKLQTRPRHRTLMRRKR------RPSTSPDDQVGKLRRLLPGGET 123

Query: 123 MDVCTLLEETANYIHCLSTQVKVMKAISDHH 154
           MDVCTLLEETANYIHCLSTQVKVMKAISD H
Sbjct: 124 MDVCTLLEETANYIHCLSTQVKVMKAISDQH 147

[Close]

BLAST of CcUC08G148350 vs. NCBI nr
Match: KAG7025295.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-43
Identity = 108/152 (71.05%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYS 60
           MAS+SG T MNS+SS LRLARTFLRSFS+IKS+   T   S S+  L+R+SRRIK+AAYS
Sbjct: 1   MASESGTTPMNSSSSSLRLARTFLRSFSRIKSRRPTT-AASRSAFELRRRSRRIKIAAYS 60

Query: 61  SMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGG 120
           SMARVAGP+RAWARALLFKL+TR  H TLM  RR    +T PS+  D+ VGKLRRLLPGG
Sbjct: 61  SMARVAGPQRAWARALLFKLNTRARHGTLMRRRR----STMPSAYPDDHVGKLRRLLPGG 120

Query: 121 DRMDVCTLLEETANYIHCLSTQVKVMKAISDH 153
           D MDVCTLLEETA+YIHCLS QVKVM AI+ H
Sbjct: 121 DGMDVCTLLEETADYIHCLSAQVKVMNAIAHH 147

[Close]

BLAST of CcUC08G148350 vs. NCBI nr
Match: KAG6575326.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013866.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-42
Identity = 106/154 (68.83%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYS 60
           MASKSG T + STSS LRLARTFLRSF+ IKSQ  A +   PS P L+R+SRRIKM AYS
Sbjct: 1   MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAIL---PSPPELRRRSRRIKMMAYS 60

Query: 61  SMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGG 120
           SMAR AGPR AWARALLFKL TR  HRTL+  RR          RSD++VGKLRRL+PGG
Sbjct: 61  SMARTAGPRCAWARALLFKLRTRARHRTLITRRR-------HHHRSDDRVGKLRRLVPGG 120

Query: 121 DRMDVCTLLEETANYIHCLSTQVKVMKAISDHHF 155
           + MDVCTLLEET  YI CLS QVKVMKAI DH F
Sbjct: 121 ESMDVCTLLEETGEYIQCLSAQVKVMKAICDHQF 144

[Close]

BLAST of CcUC08G148350 vs. NCBI nr
Match: XP_023005092.1 (transcription factor IBH1 [Cucurbita maxima])

HSP 1 Score: 181.4 bits (459), Expect = 5.9e-42
Identity = 105/152 (69.08%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYS 60
           MA +SGIT MNS+SS LRLARTFLRSFS+IKS+   T   S S+  L+R+SRRIK+AAYS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTT-AASRSAFELRRRSRRIKIAAYS 60

Query: 61  SMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGG 120
           SMARVAGP+R WARALLFKL+TR  HRT M  R     +T PS+  D+ VGKLRRL+PGG
Sbjct: 61  SMARVAGPQRTWARALLFKLNTRARHRTSMRRR----CSTMPSAYPDDHVGKLRRLVPGG 120

Query: 121 DRMDVCTLLEETANYIHCLSTQVKVMKAISDH 153
           D MDVCTLLEETA+YIHCLS QVKVM AI+ H
Sbjct: 121 DGMDVCTLLEETADYIHCLSAQVKVMNAIAHH 147

[Close]

BLAST of CcUC08G148350 vs. NCBI nr
Match: XP_023548405.1 (transcription factor IBH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-41
Identity = 105/154 (68.18%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYS 60
           MASKSG T + STS+ LRLARTFLRSF+ IKSQ  A +   PS P LKRQSRRIKM AYS
Sbjct: 1   MASKSGRTPIRSTSTALRLARTFLRSFANIKSQEPAIL---PSPPELKRQSRRIKMVAYS 60

Query: 61  SMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGG 120
           SMAR AGPR AWARALLFKL  R  HRTL+  RR           SD++VGKLRRL+PGG
Sbjct: 61  SMARAAGPRCAWARALLFKLRMRARHRTLITRRR-------YHHHSDDRVGKLRRLVPGG 120

Query: 121 DRMDVCTLLEETANYIHCLSTQVKVMKAISDHHF 155
           +RMDVC+LLEET  YI CL TQVKVMKAI DH F
Sbjct: 121 ERMDVCSLLEETGEYIQCLRTQVKVMKAICDHQF 144

[Close]

BLAST of CcUC08G148350 vs. ExPASy Swiss-Prot
Match: Q7XR02 (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.6e-12
Identity = 62/173 (35.84%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 12  STSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSMARVAGPRRA 71
           + +++  LA  FLR+ S+I   T  T           R++R I+ AAYSSMAR A PRRA
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATPVT-----------RRTRTIRRAAYSSMARAASPRRA 96

Query: 72  WARALLFKLHTRPTHRTLMN-------------------TRRG------GSTT-----TP 131
           W+RALL ++  R + RTLM                    + RG      G T+      P
Sbjct: 97  WSRALLGQVRARRS-RTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVP 156

Query: 132 PSSRSDNQVGK---LRRLLPGGDRMDVCTLLEETANYIHCLSTQVKVMKAISD 152
           P  R   +  +   LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ + D
Sbjct: 157 PPPRQQGEPPRAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]

BLAST of CcUC08G148350 vs. ExPASy Swiss-Prot
Match: Q01I07 (Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 0


Query: 12  STSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSMARVAGPRRA 71
           + +++  LA  FLR+ S+I   T  T           R++R I+ AAYSSMAR A PRRA
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATPVT-----------RRTRTIRRAAYSSMARAASPRRA 96

Query: 72  WARALLFKLHTRPTHRTLMN-------------------TRRG------GSTT-----TP 131
           W+RALL +   R + RTLM                    + RG      G T+      P
Sbjct: 97  WSRALLGQARARRS-RTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVP 156

Query: 132 PSSRSDNQ---VGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVKVMKAISD 152
           P  R   +      LRRL+PGG  M+  +LLEETA+Y+  L  QV++M+ + D
Sbjct: 157 PPPRQQGEPPRADALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]

BLAST of CcUC08G148350 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 23  FLRSFSKIKSQTSATITLSPSSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALLFKL 82
           FL+S S ++ Q          +P  K  + R+IK AAY SMAR A G  R W+RALL + 
Sbjct: 22  FLQSLSNLRKQNPF------DTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALL-RR 81

Query: 83  HTRPTHRTLMNTRRGGSTTTPPSSRSDNQ--------VGKLRRLLPGGDRMDVCTLLEET 142
             +  ++ +  +RR    ++    R  NQ          +LR L+PGG  M+   L+EET
Sbjct: 82  ADKDDNKIVRFSRRKWKISS--KRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEET 141

Query: 143 ANYIHCLSTQVKVMKAISD 152
           A+YI CLS QVKVM+ + D
Sbjct: 142 AHYIKCLSMQVKVMQCLVD 151

[Close]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL
Match: A0A5D3BPL2 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00050 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 115/151 (76.16%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSM 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ SAT   +P    LKRQS+RIKM AYSSM
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPD-QLKRQSQRIKMVAYSSM 63

Query: 63  ARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGGDR 122
           ARVAGPRRAWARALLFKL TRP HRTLM  +R       PS+  D+QVGKLRRLLPGG+ 
Sbjct: 64  ARVAGPRRAWARALLFKLQTRPRHRTLMRRKR------RPSTSPDDQVGKLRRLLPGGET 123

Query: 123 MDVCTLLEETANYIHCLSTQVKVMKAISDHH 154
           MDVCTLLEETANYIHCLSTQVKVMKAISD H
Sbjct: 124 MDVCTLLEETANYIHCLSTQVKVMKAISDQH 147

[Close]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL
Match: A0A1S3CLD3 (transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 115/151 (76.16%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSM 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ SAT   +P    LKRQS+RIKM AYSSM
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPD-QLKRQSQRIKMVAYSSM 63

Query: 63  ARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGGDR 122
           ARVAGPRRAWARALLFKL TRP HRTLM  +R       PS+  D+QVGKLRRLLPGG+ 
Sbjct: 64  ARVAGPRRAWARALLFKLQTRPRHRTLMRRKR------RPSTSPDDQVGKLRRLLPGGET 123

Query: 123 MDVCTLLEETANYIHCLSTQVKVMKAISDHH 154
           MDVCTLLEETANYIHCLSTQVKVMKAISD H
Sbjct: 124 MDVCTLLEETANYIHCLSTQVKVMKAISDQH 147

[Close]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL
Match: A0A0A0KDQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 106/151 (70.20%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSM 62
           SKS ITL+NSTSSRL  AR            TSAT   +P    LKRQSRRIKMAAYSSM
Sbjct: 4   SKSAITLLNSTSSRLCFAR------------TSATFASAPPD-QLKRQSRRIKMAAYSSM 63

Query: 63  ARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGGDR 122
           ARVAG RRAWARALLF+LHTRP H+TLM  +R       PS+ SD+ VGKLRRLLPGG+ 
Sbjct: 64  ARVAGRRRAWARALLFRLHTRPRHKTLMRRKR------RPSTSSDDMVGKLRRLLPGGET 123

Query: 123 MDVCTLLEETANYIHCLSTQVKVMKAISDHH 154
           MDVCTLLEETANYIHCLSTQVKVMKAIS+HH
Sbjct: 124 MDVCTLLEETANYIHCLSTQVKVMKAISNHH 135

[Close]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL
Match: A0A6J1KS83 (transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.8e-42
Identity = 105/152 (69.08%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYS 60
           MA +SGIT MNS+SS LRLARTFLRSFS+IKS+   T   S S+  L+R+SRRIK+AAYS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTT-AASRSAFELRRRSRRIKIAAYS 60

Query: 61  SMARVAGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSDNQVGKLRRLLPGG 120
           SMARVAGP+R WARALLFKL+TR  HRT M  R     +T PS+  D+ VGKLRRL+PGG
Sbjct: 61  SMARVAGPQRTWARALLFKLNTRARHRTSMRRR----CSTMPSAYPDDHVGKLRRLVPGG 120

Query: 121 DRMDVCTLLEETANYIHCLSTQVKVMKAISDH 153
           D MDVCTLLEETA+YIHCLS QVKVM AI+ H
Sbjct: 121 DGMDVCTLLEETADYIHCLSAQVKVMNAIAHH 147

[Close]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL
Match: A0A2N9I4P0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.3e-26
Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 6   GITLMNSTSSRLRLARTFLRSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSMARV 65
           G+TL N+ S R++ AR F+R+ SK+K     T   S S   ++++S+RIK+AAYSSMA  
Sbjct: 5   GVTL-NTNSRRIKFARRFIRTLSKMKK----TAPSSSSIDEVRKRSQRIKIAAYSSMAHA 64

Query: 66  AGPRRAWARALLFKLHTRPTHRTLMNTRRGGSTTTPPSSRSD-----NQVGKLRRLLPGG 125
            G ++AW+RA+LFKL  R  H+ +M  RR        + ++D     NQ  KLR+L+PGG
Sbjct: 65  VGSKKAWSRAILFKLRNRARHQGMMMRRRSIGFKKKRAIKNDPPGEQNQTKKLRQLVPGG 124

Query: 126 DRMDVCTLLEETANYIHCLSTQVKVMKAISDH 153
             MD+C+LLEETA+YI CLSTQVKVM+ I+DH
Sbjct: 125 KAMDMCSLLEETAHYIRCLSTQVKVMQTIADH 151

[Close]

BLAST of CcUC08G148350 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 23  FLRSFSKIKSQTSATITLSPSSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALLFKL 82
           FL+S S ++ Q          +P  K  + R+IK AAY SMAR A G  R W+RALL + 
Sbjct: 22  FLQSLSNLRKQNPF------DTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALL-RR 81

Query: 83  HTRPTHRTLMNTRRGGSTTTPPSSRSDNQ--------VGKLRRLLPGGDRMDVCTLLEET 142
             +  ++ +  +RR    ++    R  NQ          +LR L+PGG  M+   L+EET
Sbjct: 82  ADKDDNKIVRFSRRKWKISS--KRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEET 141

Query: 143 ANYIHCLSTQVKVMKAISD 152
           A+YI CLS QVKVM+ + D
Sbjct: 142 AHYIKCLSMQVKVMQCLVD 151

[Close]

BLAST of CcUC08G148350 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 41.2 bits (95), Expect = 8.8e-04
Identity = 39/143 (27.27%), Postives = 61/143 (42.66%), Query Frame = 0


Query: 25  RSFSKIKSQTSATITLSPSSPHLKRQSRRIKMAAYSSMARV----------AGPRRAWAR 84
           R FS   ++  + +     + HL    +++ M   SS   V          +    AW+R
Sbjct: 11  RVFSLEPNKNPSAVFTRKYTSHLVPALKKLNMNKNSSKQTVKHEVDMALALSAQEFAWSR 70

Query: 85  ALLFKLHTRPTHRTLMNTRRGG-STTTPPSSRSDNQVG-------KLRRLLPGGDRMDVC 144
            LL KL +     T  ++   G      P     N+ G       +L++LLPGG+ M+V 
Sbjct: 71  FLLQKLSSSSNPTTTTSSSSDGIRILERPDKEGGNEEGGIEERLRELKKLLPGGEEMNVE 130

Query: 145 TLLEETANYIHCLSTQVKVMKAI 150
            +L E  NYI CL  Q   +K+I
Sbjct: 131 EMLSEIGNYIKCLELQTIALKSI 153

The following BLAST results are available for this feature:

BLAST of CcUC08G148350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464343.1	3.8e-49	76.16	PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription ...	[more]
KAG7025295.1	1.8e-43	71.05	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6575326.1	2.6e-42	68.83	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_023005092.1	5.9e-42	69.08	transcription factor IBH1 [Cucurbita maxima]	[more]
XP_023548405.1	1.0e-41	68.18	transcription factor IBH1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC08G148350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XR02	6.6e-12	35.84	Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ...	[more]
Q01I07	1.1e-11	35.84	Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV...	[more]
Q9SKX1	1.8e-09	38.13	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of CcUC08G148350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPL2	1.8e-49	76.16	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CLD3	1.8e-49	76.16	transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1	[more]
A0A0A0KDQ3	1.7e-42	70.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1	[more]
A0A6J1KS83	2.8e-42	69.08	transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1	[more]
A0A2N9I4P0	6.3e-26	48.68	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1	[more]

BLAST of CcUC08G148350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43060.1	1.3e-10	38.13	ILI1 binding bHLH 1	[more]
AT4G30180.1	8.8e-04	27.27	sequence-specific DNA binding transcription factors;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..110
None	No IPR available	PANTHER	PTHR33124:SF76	TRANSCRIPTION FACTOR IBH1-LIKE	coord: 3..152
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 3..152
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 109..149 e-value: 2.49984E-14 score: 61.4844
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 111..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G148350.1	CcUC08G148350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding