CcUC06G125190 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G125190
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein MIS12 homolog
Location	CicolChr06: 27616861 .. 27619874 (+)
RNA-Seq Expression	CcUC06G125190
Synteny	CcUC06G125190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCGTATTGTTCCTTCTGTTTCCATCTCTTCAACTTAGGTTTTCAATTTTGTTCGGTTAATTTTATTGATTCTTGTCAATTCCTTTTCTCTTCAGACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGTAAGGTTTAATTTATATTATATTACTTGGCATATTCTTATCAGCCGTTAATTTCTGGTTTCTTAAGTTTGTGCTCTTAAGCACTTTTTGGAATTGTTCCGATTTTCTTTGAACAAAATTGTTTATTTGCCTCGTTTCTGTAGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGTAGGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGTCCGTATCAGTATCGAAATTTCAAGTTATAGTTTATCAATTGAATATCAATATCGACAGATATTTGTGTAAATCAATAAGTTTATCCAAAAAAAAAAAATTAAATTAAATTAATAATTAAGTTATTTTTGCTTTCAAAGAAGTTGTAGCTTATTGAGATTAATAGATGACAGCTTCTTATGTTTTTTGTATATTTGTTGATATCAACATATCAACAAATAATTGAAACCTTGTCTGTGCTTTGTTACGTGAAGTTGCTCTGTTAGTGTTGTTTTTATGACTGAATTAGTGGCCCTCTATGTCCGAATCATTTCACAAGCGATTAATAATTGAGTATGTAAAATGGCTGCTTGTTGATTTTGCGAGTTTCCCACTTCTTGTGTACTGATTAGAGAGCTTCCTCAAATTTTGGTTCTGGGGCGAATAAATTTTTGGAACTTTGGAGAAATGTGCATCATCAAGTTTCAAGTTTTTTACAAGATATACTCATTGTTTAGATGCAGTTTCGAGTTTCCATATTTTCTGACCTTAGAGCTTCCACATTTTGTTTGCTATAAGTCAATGTGGTTCCATTGTCAATAGAAATATGGTCATGATGGTAAAAGATTGTTTTTAGCTCTAAAATGAATGTAAGCAAATGTCTGCAGAATTTTTTAGAAAATCTGTCGTTGGTGCATCATGGCTTTTCTTTTTCAATCATTTTTTGAAGTCCAAACTATGTGAATTCCAGTTCGACTCCTTTCATTTTGAACCAATATAGTCACTTGGGGTTGGGCAATCTCTGTCCGTTTCACTGGCATCTCAATGGAATCTGCGATATCTTATTGTCAAGTTGCTAAATTATCAATGGTTCCCATATTCTGTTTGTGAACTTTGAGTTATGGTTAATTGAGTCAATGTATTCTCTTACTACTTTTTCTTTTTTCTAATGCAATAAACATATTCTGATTCAGATCTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTTATTACTTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAATTGTGCTTAATTAAAATCAATTTTCTCTTCCTGCACTCCTGGGTATACTTGCGCCCTGCTCTACTAGTATACTCATGAAGGCATACTCGAAATGAAATATACAAATAATGTATGAAGCTGTTTTTTTCTTATAATGAACCTTTATTGTCATAGTCAGCTTGGTAGAGCAAAGTTTCTGTAAACACTAACCTTCTCTCTGACGGATCATTCTGGCCTGCATATCTCATGGTGACACAAATTCTAATAGTTCCAAATGATACTTTTTATTGAACACCTGCAAAATCATTTCATTTAGGCAATTTTTAGATTACCCTAAAGTAAACTCTAGTAGTCCCATTTTCTGTTGTCCATTCCATAAAAGAGGAACTTCAGTATGTGAATAAGGCAATTTATTTTCCTATTTTCATTTTAAAGGCCACTTGGACAAAATTTATTCACTAGTATTAAATTTCATTGTACTGAAACTTTAACGGTTGGCTGGTCATTTGGGGTTTGTGCTATTTTGTGGGATATTTGGGAGAAGACAAATAACAAAGTGTGTAGAGGTGTGGCTGAACTATGGTGATGTTTGGTCCTTGGTGAGGTTTCATGTTTCTCTTTGGAATTCAGTTTCAAAAACCTTTTGTAACCATCCTCTAGATAGTGTCTTATTTAGTTTGAAACCCTTCCTATAGAGGGGTTTTGCAGGCTTGTCCTTTTTGTTGTCTTGTATTCTTCATTTTTTCTCTATAAAAACCGTTTTCCCTATCAAACTTCAATGGTTGGCAAGTTAAAGCTGTTCATGATTTTAGGAAGCAGACTTCTTATGCATATCAACTTCTTGCAGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTAGTAGGATCTTCAAGCTACTTTATTATCAATCAAGCTCATTTTAGCTTTCTGGAAGTTGAATTTCATCTCACATGCTGGTTGATACTTGTTTCTGTTCTGTAGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA

mRNA sequence

ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA

Coding sequence (CDS)

ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA

Protein sequence

MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL

Homology

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BLAST of CcUC06G125190 vs. NCBI nr
Match: XP_038879945.1 (protein MIS12 homolog [Benincasa hispida])

HSP 1 Score: 387.9 bits (995), Expect = 6.4e-104
Identity = 206/240 (85.83%), Postives = 217/240 (90.42%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGEAVFDSLNLNPQLFINEALNIVDDL+DDAF FYQSQASATLKTEGSDRSQDLTL
Sbjct: 31  MEGSKGEAVFDSLNLNPQLFINEALNIVDDLVDDAFGFYQSQASATLKTEGSDRSQDLTL 90

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
           GISRVRALVQL LDKRLAMWEK+   + C   P        D+SPG+TSISHDYDV LDT
Sbjct: 91  GISRVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDDSPGVTSISHDYDVGLDT 150

Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
           ELDF RNKLSE RKENIVL+QELQALERQTA+SNSQINHFNEALQLYEQNSVNEMFQEMM
Sbjct: 151 ELDFLRNKLSEVRKENIVLNQELQALERQTATSNSQINHFNEALQLYEQNSVNEMFQEMM 210

Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
           GTASELRAKIGKLKKRRMEE+KL+KVEKVHTNGDISH+HNG SNAKLDDI+ FL DLKTL
Sbjct: 211 GTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHYHNGLSNAKLDDIKIFLDDLKTL 269

[Close]

BLAST of CcUC06G125190 vs. NCBI nr
Match: KAA0058032.1 (Centromere protein Mis12 [Cucumis melo var. makuwa])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 198/240 (82.50%), Postives = 216/240 (90.00%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASATLKTEGSDRSQDLTL
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
           GIS+VRALVQL LDKRLAMWEK+   + C   P        DESPG+TSI+HD DVDLDT
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120

Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
           ELD  RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180

Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
            TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239

[Close]

BLAST of CcUC06G125190 vs. NCBI nr
Match: XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 200/242 (82.64%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL+L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
           GISRVR  VQ  LDKRLAMWEK+   + C   P        DESP +TS+S D  YDVDL
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120

Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
           DTELDF RNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180

Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of CcUC06G125190 vs. NCBI nr
Match: KAA0058004.1 (Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere protein Mis12 [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 1.9e-100
Identity = 198/240 (82.50%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
           GIS+VRALVQL LDKRLAMWEK+   + C   P        DESPG+TSI+HD DVDLDT
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120

Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
           ELD  RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180

Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
            TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239

[Close]

BLAST of CcUC06G125190 vs. NCBI nr
Match: KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374.4 bits (960), Expect = 7.3e-100
Identity = 199/242 (82.23%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
           GISRVR  VQ  LDKRLAMWEK+   + C   P        DESP +TS+S D  YDVDL
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120

Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
           DTELDF RNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180

Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of CcUC06G125190 vs. ExPASy Swiss-Prot
Match: Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.7e-46
Identity = 112/248 (45.16%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSD--RSQDL 60
           MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY   AS +LK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  TLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDV 120
           + GI+RVR L+   +D RL +WE +S   FC   P   D  +  +S   +S+  D  YD+
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120

Query: 121 DLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
           +LD ELD  R+KL+   K ++ L  ELQALER + S    +   NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180

Query: 181 QEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
           +EM   ASELRA + +LK RRM+ ++ +KV++      + +H   FS    + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238

[Close]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match: A0A5A7UQ95 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003370 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.5e-101
Identity = 198/240 (82.50%), Postives = 216/240 (90.00%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASATLKTEGSDRSQDLTL
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
           GIS+VRALVQL LDKRLAMWEK+   + C   P        DESPG+TSI+HD DVDLDT
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120

Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
           ELD  RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180

Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
            TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239

[Close]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match: A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 9.4e-101
Identity = 198/240 (82.50%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1   MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
           GIS+VRALVQL LDKRLAMWEK+   + C   P        DESPG+TSI+HD DVDLDT
Sbjct: 61  GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120

Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
           ELD  RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180

Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
            TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239

[Close]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match: A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 198/242 (81.82%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
           GISRVR  VQ  LDKRLAMWEK+   + C   P        DESP +TS+S D  YDVDL
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120

Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
           DTELDF R  LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180

Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match: A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 197/242 (81.40%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
           GISRVR  VQ  LDKRLAMWEK+   + C   P        DESP +TS+S D  YDVDL
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120

Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
           DTELDF RNKLSE RKENIVL+QELQALERQ ASSNSQ+N FNEALQLYE+NSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQE 180

Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
           MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGD SHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLK 240

[Close]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match: A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.8e-97
Identity = 198/243 (81.48%), Postives = 210/243 (86.42%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
           MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
           GISRVR  VQ  LDKRLAMWEK+   + C   P        DESP +TS+S D  YDVDL
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120

Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQ- 180
           DTELDF R  LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQ 
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQA 180

Query: 181 EMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADL 240
           EMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADL
Sbjct: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADL 240

[Close]

BLAST of CcUC06G125190 vs. TAIR 10
Match: AT5G35520.1 (minichromosome instability 12 (mis12)-like )

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-47
Identity = 112/248 (45.16%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSD--RSQDL 60
           MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY   AS +LK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  TLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDV 120
           + GI+RVR L+   +D RL +WE +S   FC   P   D  +  +S   +S+  D  YD+
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120

Query: 121 DLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
           +LD ELD  R+KL+   K ++ L  ELQALER + S    +   NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180

Query: 181 QEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
           +EM   ASELRA + +LK RRM+ ++ +KV++      + +H   FS    + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238

The following BLAST results are available for this feature:

BLAST of CcUC06G125190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879945.1	6.4e-104	85.83	protein MIS12 homolog [Benincasa hispida]	[more]
KAA0058032.1	1.1e-100	82.50	Centromere protein Mis12 [Cucumis melo var. makuwa]	[more]
XP_023515499.1	1.1e-100	82.64	protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAA0058004.1	1.9e-100	82.50	Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere prote...	[more]
KAG6589575.1	7.3e-100	82.23	Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC06G125190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V0Z5	3.7e-46	45.16	Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1	[more]

BLAST of CcUC06G125190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQ95	5.5e-101	82.50	Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7US57	9.4e-101	82.50	Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1JME3	1.1e-98	81.82	protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1E0A1	1.1e-98	81.40	protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1	[more]
A0A6J1JD43	2.8e-97	81.48	protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]

BLAST of CcUC06G125190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35520.1	2.6e-47	45.16	minichromosome instability 12 (mis12)-like	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
IPR008685	Centromere protein Mis12	PFAM	PF05859	Mis12	coord: 11..140 e-value: 6.4E-10 score: 39.2
IPR008685	Centromere protein Mis12	PANTHER	PTHR14527	PROTEIN MIS12 HOMOLOG	coord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G125190.1	CcUC06G125190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0051382	kinetochore assembly
biological_process	GO:0000070	mitotic sister chromatid segregation
biological_process	GO:0034501	protein localization to kinetochore
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000818	nuclear MIS12/MIND complex
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus