Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCGTATTGTTCCTTCTGTTTCCATCTCTTCAACTTAGGTTTTCAATTTTGTTCGGTTAATTTTATTGATTCTTGTCAATTCCTTTTCTCTTCAGACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGTAAGGTTTAATTTATATTATATTACTTGGCATATTCTTATCAGCCGTTAATTTCTGGTTTCTTAAGTTTGTGCTCTTAAGCACTTTTTGGAATTGTTCCGATTTTCTTTGAACAAAATTGTTTATTTGCCTCGTTTCTGTAGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGTAGGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGTCCGTATCAGTATCGAAATTTCAAGTTATAGTTTATCAATTGAATATCAATATCGACAGATATTTGTGTAAATCAATAAGTTTATCCAAAAAAAAAAAATTAAATTAAATTAATAATTAAGTTATTTTTGCTTTCAAAGAAGTTGTAGCTTATTGAGATTAATAGATGACAGCTTCTTATGTTTTTTGTATATTTGTTGATATCAACATATCAACAAATAATTGAAACCTTGTCTGTGCTTTGTTACGTGAAGTTGCTCTGTTAGTGTTGTTTTTATGACTGAATTAGTGGCCCTCTATGTCCGAATCATTTCACAAGCGATTAATAATTGAGTATGTAAAATGGCTGCTTGTTGATTTTGCGAGTTTCCCACTTCTTGTGTACTGATTAGAGAGCTTCCTCAAATTTTGGTTCTGGGGCGAATAAATTTTTGGAACTTTGGAGAAATGTGCATCATCAAGTTTCAAGTTTTTTACAAGATATACTCATTGTTTAGATGCAGTTTCGAGTTTCCATATTTTCTGACCTTAGAGCTTCCACATTTTGTTTGCTATAAGTCAATGTGGTTCCATTGTCAATAGAAATATGGTCATGATGGTAAAAGATTGTTTTTAGCTCTAAAATGAATGTAAGCAAATGTCTGCAGAATTTTTTAGAAAATCTGTCGTTGGTGCATCATGGCTTTTCTTTTTCAATCATTTTTTGAAGTCCAAACTATGTGAATTCCAGTTCGACTCCTTTCATTTTGAACCAATATAGTCACTTGGGGTTGGGCAATCTCTGTCCGTTTCACTGGCATCTCAATGGAATCTGCGATATCTTATTGTCAAGTTGCTAAATTATCAATGGTTCCCATATTCTGTTTGTGAACTTTGAGTTATGGTTAATTGAGTCAATGTATTCTCTTACTACTTTTTCTTTTTTCTAATGCAATAAACATATTCTGATTCAGATCTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTTATTACTTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAATTGTGCTTAATTAAAATCAATTTTCTCTTCCTGCACTCCTGGGTATACTTGCGCCCTGCTCTACTAGTATACTCATGAAGGCATACTCGAAATGAAATATACAAATAATGTATGAAGCTGTTTTTTTCTTATAATGAACCTTTATTGTCATAGTCAGCTTGGTAGAGCAAAGTTTCTGTAAACACTAACCTTCTCTCTGACGGATCATTCTGGCCTGCATATCTCATGGTGACACAAATTCTAATAGTTCCAAATGATACTTTTTATTGAACACCTGCAAAATCATTTCATTTAGGCAATTTTTAGATTACCCTAAAGTAAACTCTAGTAGTCCCATTTTCTGTTGTCCATTCCATAAAAGAGGAACTTCAGTATGTGAATAAGGCAATTTATTTTCCTATTTTCATTTTAAAGGCCACTTGGACAAAATTTATTCACTAGTATTAAATTTCATTGTACTGAAACTTTAACGGTTGGCTGGTCATTTGGGGTTTGTGCTATTTTGTGGGATATTTGGGAGAAGACAAATAACAAAGTGTGTAGAGGTGTGGCTGAACTATGGTGATGTTTGGTCCTTGGTGAGGTTTCATGTTTCTCTTTGGAATTCAGTTTCAAAAACCTTTTGTAACCATCCTCTAGATAGTGTCTTATTTAGTTTGAAACCCTTCCTATAGAGGGGTTTTGCAGGCTTGTCCTTTTTGTTGTCTTGTATTCTTCATTTTTTCTCTATAAAAACCGTTTTCCCTATCAAACTTCAATGGTTGGCAAGTTAAAGCTGTTCATGATTTTAGGAAGCAGACTTCTTATGCATATCAACTTCTTGCAGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTAGTAGGATCTTCAAGCTACTTTATTATCAATCAAGCTCATTTTAGCTTTCTGGAAGTTGAATTTCATCTCACATGCTGGTTGATACTTGTTTCTGTTCTGTAGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA
mRNA sequence
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA
Coding sequence (CDS)
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCACCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGATCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTCCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTCTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTTAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGAGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGATATTCAAGAATTTTTAGCTGATTTGAAGACCCTTTAA
Protein sequence
MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL
Homology
BLAST of CcUC06G125190 vs. NCBI nr
Match:
XP_038879945.1 (protein MIS12 homolog [Benincasa hispida])
HSP 1 Score: 387.9 bits (995), Expect = 6.4e-104
Identity = 206/240 (85.83%), Postives = 217/240 (90.42%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGEAVFDSLNLNPQLFINEALNIVDDL+DDAF FYQSQASATLKTEGSDRSQDLTL
Sbjct: 31 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLVDDAFGFYQSQASATLKTEGSDRSQDLTL 90
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
GISRVRALVQL LDKRLAMWEK+ + C P D+SPG+TSISHDYDV LDT
Sbjct: 91 GISRVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDDSPGVTSISHDYDVGLDT 150
Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELDF RNKLSE RKENIVL+QELQALERQTA+SNSQINHFNEALQLYEQNSVNEMFQEMM
Sbjct: 151 ELDFLRNKLSEVRKENIVLNQELQALERQTATSNSQINHFNEALQLYEQNSVNEMFQEMM 210
Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
GTASELRAKIGKLKKRRMEE+KL+KVEKVHTNGDISH+HNG SNAKLDDI+ FL DLKTL
Sbjct: 211 GTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHYHNGLSNAKLDDIKIFLDDLKTL 269
BLAST of CcUC06G125190 vs. NCBI nr
Match:
KAA0058032.1 (Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 198/240 (82.50%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASATLKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
GIS+VRALVQL LDKRLAMWEK+ + C P DESPG+TSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CcUC06G125190 vs. NCBI nr
Match:
XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 200/242 (82.64%), Postives = 214/242 (88.43%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL+L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
GISRVR VQ LDKRLAMWEK+ + C P DESP +TS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDF RNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CcUC06G125190 vs. NCBI nr
Match:
KAA0058004.1 (Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 376.3 bits (965), Expect = 1.9e-100
Identity = 198/240 (82.50%), Postives = 215/240 (89.58%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
GIS+VRALVQL LDKRLAMWEK+ + C P DESPG+TSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CcUC06G125190 vs. NCBI nr
Match:
KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 374.4 bits (960), Expect = 7.3e-100
Identity = 199/242 (82.23%), Postives = 212/242 (87.60%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
GISRVR VQ LDKRLAMWEK+ + C P DESP +TS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDF RNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CcUC06G125190 vs. ExPASy Swiss-Prot
Match:
Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 3.7e-46
Identity = 112/248 (45.16%), Postives = 164/248 (66.13%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDV 120
+ GI+RVR L+ +D RL +WE +S FC P D + +S +S+ D YD+
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120
Query: 121 DLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
+LD ELD R+KL+ K ++ L ELQALER + S + NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180
Query: 181 QEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
+EM ASELRA + +LK RRM+ ++ +KV++ + +H FS + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238
BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match:
A0A5A7UQ95 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003370 PE=3 SV=1)
HSP 1 Score: 377.1 bits (967), Expect = 5.5e-101
Identity = 198/240 (82.50%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASATLKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
GIS+VRALVQL LDKRLAMWEK+ + C P DESPG+TSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELR+KIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match:
A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)
HSP 1 Score: 376.3 bits (965), Expect = 9.4e-101
Identity = 198/240 (82.50%), Postives = 215/240 (89.58%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHDYDVDLDT 120
GIS+VRALVQL LDKRLAMWEK+ + C P DESPG+TSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD RNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELRAKIGK+KKRR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match:
A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 198/242 (81.82%), Postives = 210/242 (86.78%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
GISRVR VQ LDKRLAMWEK+ + C P DESP +TS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDF R LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match:
A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)
HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98
Identity = 197/242 (81.40%), Postives = 210/242 (86.78%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
GISRVR VQ LDKRLAMWEK+ + C P DESP +TS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDF RNKLSE RKENIVL+QELQALERQ ASSNSQ+N FNEALQLYE+NSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTNGD SHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CcUC06G125190 vs. ExPASy TrEMBL
Match:
A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 364.8 bits (935), Expect = 2.8e-97
Identity = 198/243 (81.48%), Postives = 210/243 (86.42%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDVDL 120
GISRVR VQ LDKRLAMWEK+ + C P DESP +TS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQ- 180
DTELDF R LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQ
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQA 180
Query: 181 EMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADL 240
EMMGTASELRAKIGKLKKRRMEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADL
Sbjct: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADL 240
BLAST of CcUC06G125190 vs. TAIR 10
Match:
AT5G35520.1 (minichromosome instability 12 (mis12)-like )
HSP 1 Score: 186.4 bits (472), Expect = 2.6e-47
Identity = 112/248 (45.16%), Postives = 164/248 (66.13%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASATLKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLDLDKRLAMWEKFSFYSFCDKAPVPKDKNIEDESPGLTSISHD--YDV 120
+ GI+RVR L+ +D RL +WE +S FC P D + +S +S+ D YD+
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120
Query: 121 DLDTELDFFRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
+LD ELD R+KL+ K ++ L ELQALER + S + NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180
Query: 181 QEMMGTASELRAKIGKLKKRRMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
+EM ASELRA + +LK RRM+ ++ +KV++ + +H FS + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879945.1 | 6.4e-104 | 85.83 | protein MIS12 homolog [Benincasa hispida] | [more] |
KAA0058032.1 | 1.1e-100 | 82.50 | Centromere protein Mis12 [Cucumis melo var. makuwa] | [more] |
XP_023515499.1 | 1.1e-100 | 82.64 | protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
KAA0058004.1 | 1.9e-100 | 82.50 | Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere prote... | [more] |
KAG6589575.1 | 7.3e-100 | 82.23 | Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q2V0Z5 | 3.7e-46 | 45.16 | Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UQ95 | 5.5e-101 | 82.50 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A5A7US57 | 9.4e-101 | 82.50 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A6J1JME3 | 1.1e-98 | 81.82 | protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
A0A6J1E0A1 | 1.1e-98 | 81.40 | protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1 | [more] |
A0A6J1JD43 | 2.8e-97 | 81.48 | protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35520.1 | 2.6e-47 | 45.16 | minichromosome instability 12 (mis12)-like | [more] |