Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCAATCAAGTCCCTTGCGGTTGCTGTTTGCTTTTTACTCTCTTTTTCCGCCATTCTCTCTGAAGGTCCAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCCAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCTGGATCTGGTTCGGGATATGGTGGAGGTTGGGGCAGAGGAGGCGGCAATGGCGGCGGTGAAGGATATGGTGAAGCTCATGGCTATGGTGAGGGTCATGGTTATGGAGGAGGTAACTAAAGAAAAAATCATAGCTAGGGAAGGACGTATTAATAGGAAAGTATAGCAGGTAGGTTACGTGGTTGATTTAAATCGTGGTCTTAATTTTATGTATTTAAATAAAGATAAGAGATGATGGAGGCGTGTGTTTAGTGTTCGTGTTGTAGCAGTCGTGAAATTGTCTTAGACGCGTGTGACGGATTTTCATGTTTATGTTTCACAATATATATTAATGTGGACTTGTTGCGGATATTATATGCAAAATACGTAGTTTTCTTTTTAAACCTCCCCTAAACTAATATATTCTACTATTATTTTGTAGTTGCCATCGAAAAACACCACATCTATGACCAAAACATATGCTGGTTTTTATTTTCTTTTTTTTTTTTAAATAATAATAATAAATAAGCTGCTTTTATTAGAAAATGTTTGTTAAGATTTCAAAATTTACTTTTGAAGAATAAAATTATATAAAAAAATTAATTGCCAAACAGGAGTTTGAATCCTGAATTGGCTTTGTTTCCGCAACATGCCATTACGGTTGTCAAGAACATCTTAGTTGTATGAACCATGCATCTTTTCTAGAGAATATTTTTTCTTATATGTTACAGATTTTTTGGAAGATACTTTCTATTTCCTGTATATGGATGATTCTTTTGTCTTTACAAACTTGTTTCCTTATTAAGAATATATATAGTTGGGCTCATGGTGTATTTTAGGGTTATTTTAGGGTTACGACTTTTGAAGACCTCATGTGTATGTTTGACGTCAAGGAGTTGTGCCAAAAAGATGAGGTGTCCCTCACTGAGAGATTGTGGTTGTTGTACTTACTCTAAAATGTTAGTTCATGTTTCTATTCCTGAAAAGAATAAACTTCAGTATTGACTTAATACTCAAAGGAGTCTAAATTCTAATATTGAGAAGGATTCTTAGTCGTAGGGGAGCCTAAATAATCTTTTTCTGAGGTGTATATCAAACAAGAAGATGAAAATAGTAACAAAGCAATAGGAGAGGGAGTCTCAAGTTTAGGGAGCTTAAACTCTTCATTAGGAGTGAGTTTTCTGAGAGTCTCTCTTTAGAAGTTATCTATTAGATAAATACTTGATTGTAATTACTTAACTTTTATTAGTGAAGATTTTTTCATCAGCCACATTGCCCCATACGTAGGTATCGTAAGTATGATTACACCAAACTGGGTTATCAACTTATGTGTGTTTATCTTTATATTATTGTTATTCTCACAATTTGATTCATTATCTCTTACATTGTTTATAACATTGTGTTGACTTGTGTAGTCGCATATTACCTATAAATTTCAATATTGATATGAGTTCTTATATATATAAAAGCTAACATAAAGAAAACAGAAAGGAAAATAAAATATATATCTAACGAGAAAGAAAGAACCTCCAAAAAAAGGGAGAAAATGAATTTTTTTTTCTTTTTTTGGAAAAAGCAAGTAATTTGCACGTGCTCCAACCAAGGTGTAATTGATGACCGGGGTCTACACTATTAGACCAAAGCAATATTATTAAAGGTTGATTGGATTAACTTAAAAAATAAATATTTTTTAAAATTTTATTTTTATTTAAATACTTTTGATAAGATCTCTTTAAAATAAAGACACTAATAATTTTTAAAATCAGTTTTATGATTGATTGTCAAATATCTGTATTTCTTTTCACATAACTTATTTTTTAAATTAAACACTTGATAAGTTCAAAGTTCAAATAAACCTGAATTTATTATGAATTTTGAAACCCGGGTCTAAGTAAATATGAAGACGACAACAAAAAAAATATGAATTTTGAATTTGAACTTTTTGTATAGTGTATAGGCTTTTGTATAAAAGAAAATATTTAAGTGTATCTCAAGTTACATTTATCCTTACACAGTTCATTTAGTTATCTAAATAATAATTGTAGCGTGCCAAAAGTTTTTTATTTTAAAAAAAAAATTAATGCATGAAGATAGATGTTATCATAAGAAATTTAGATGATTAGATTCTCACTATAAATTAAAAAGTGAAAATATTTATGTATACAAGATGAATATTAATTCTCTCTTTTATTAGTTTTAAAGATGACATATATAGATATTTTTGAAAATGTGGGGAGTTGGATTGCTTACTTAGAAAGGAAATCATTTATTTATTATAATATACATAATAGTATACACATTGGAATGAGTAATAATTATTAACTTTTTTTTTTTTTTAATATATTATAGAGTTAGGTGATTTGAAGTATAGATTTATTGATTACAGATACATATTGTATGTCAATTGAATTACACTCCCTTTAATAATAAATTATAGACTTAAAGAACCAATTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAGCCCAATACAACTTCAATTTGAAACGAAAAAAAATTCGGACGTGAAAGTCTAATCCAACGTCCTACCAAATTAGAAAAAGGAGTAATTAAACAAAACGACCCAATTGCCAAACCTCGGCCTTGGCCATTGGCATGTACCATTATAGGCCTACTTTTTGTAAGATCCAACTTATCACAGTTCCTCCGATTGGCTCAAATGAAATAGGAGACTCTAGGTTTACTCCTCTTATAAAATTATATCAATATGATTCATCATTTTTAGGTCAGATCTTGGACTACATGCCCCCTCAAGAAGATTAA
mRNA sequence
ATGCCTTCAATCAAGTCCCTTGCGGTTGCTGTTTGCTTTTTACTCTCTTTTTCCGCCATTCTCTCTGAAGGTCCAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCCAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCTGGATCTGGTTCGGGATATGGTGGAGGTTGGGGCAGAGGAGGCGGCAATGGCGGCGGTGAAGGATATGGTGAAGCTCATGGCTATGGTGAGGGTCATGGTTATGGAGGAGGTCAGATCTTGGACTACATGCCCCCTCAAGAAGATTAA
Coding sequence (CDS)
ATGCCTTCAATCAAGTCCCTTGCGGTTGCTGTTTGCTTTTTACTCTCTTTTTCCGCCATTCTCTCTGAAGGTCCAGTCGCCAGAAAGGATCTCGGGATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAGCTGGAATTGGCTTAGGCTTAGGTGGAAGTGGTTCTGGCTCCGGTTCTGGCTCTGGGTCCAGTTCATCTTCATCTTCTTCATCATACTCCTCCAGCTCAAGCTCTGGGTCCGGAGCTGGGTCCGAAGCTGGCTCGTACGCAGGGTCTCGAGCAGGGTCAGGTTCGGGTGGAAACAGGAATGGAGGGTCTGGATCTGGTTCGGGATATGGTGGAGGTTGGGGCAGAGGAGGCGGCAATGGCGGCGGTGAAGGATATGGTGAAGCTCATGGCTATGGTGAGGGTCATGGTTATGGAGGAGGTCAGATCTTGGACTACATGCCCCCTCAAGAAGATTAA
Protein sequence
MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGGGWGRGGGNGGGEGYGEAHGYGEGHGYGGGQILDYMPPQED
Homology
BLAST of CcUC06G122610 vs. NCBI nr
Match:
XP_038879748.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])
HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 134/145 (92.41%), Postives = 135/145 (93.10%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSG 60
M SIKSLAV VCFLLSFSAILSEG VARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSG
Sbjct: 1 MASIKSLAVVVCFLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSG 60
Query: 61 SGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGS--GSGGNRNGGSGSGSGYGGGWGR 120
SGSSSSSSS S SSSSSSGSGAGSEAGSYAGS AGS GSGGNRNGGSGSG+GYGGG GR
Sbjct: 61 SGSSSSSSSYSSSSSSSSGSGAGSEAGSYAGSYAGSRAGSGGNRNGGSGSGTGYGGGSGR 120
Query: 121 GGGNGGGEGYGEAHGYGEGHGYGGG 144
GGGNGGGEGYGE HGYGEGHGYGGG
Sbjct: 121 GGGNGGGEGYGEGHGYGEGHGYGGG 145
BLAST of CcUC06G122610 vs. NCBI nr
Match:
XP_008443813.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])
HSP 1 Score: 165.2 bits (417), Expect = 4.3e-37
Identity = 128/151 (84.77%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG----GSGSG 60
M SIKSLA+ VC LLSFS LSEG VARKDLGIDLGG+GVGLGAGIGLG+G GSGSG
Sbjct: 1 MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60
Query: 61 SGSGSGSSSSSSSSSYSSSSSSGSGAGSE----AGSYAGSRAGSGSGGNRNGGSGSGSGY 120
SGSGSGS SSSSSSSYSSSSSSGSGAGSE AGSYAGSRAGSGSGGNRNGGSG GSGY
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GGGWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
GGG GRGG NG GEGYGE HGYGEGHGYGGG
Sbjct: 121 GGGSGRGGSNGNGEGYGEGHGYGEGHGYGGG 151
BLAST of CcUC06G122610 vs. NCBI nr
Match:
XP_004146660.2 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypothetical protein Csa_020101 [Cucumis sativus])
HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35
Identity = 129/152 (84.87%), Postives = 131/152 (86.18%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG----GSGSG 60
M SIKSLA+ VC LLSFSAILSEG VARKDLGIDLGGVGVGLG GIGLG+G GSGSG
Sbjct: 1 MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
Query: 61 SGSGSGSSSSSSSSSYSSSSSSGSGAGSE----AGSYAGSRAGSGSGGNRNGGSGSGSGY 120
SGSGSGS SSSSSSSYSSSSSSGSGAGSE AGSYAGSRAGSGSGGNRNGGSG GSGY
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GGGWGRGGG-NGGGEGYGEAHGYGEGHGYGGG 144
GGG GRGGG N GEGYGE HGYGEG GYGGG
Sbjct: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGG 152
BLAST of CcUC06G122610 vs. NCBI nr
Match:
XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata])
HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35
Identity = 124/149 (83.22%), Postives = 129/149 (86.58%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG------GSG 60
M SI SL + VCFLLSFS ILS+ VARKDLG+DLGG+GVG+G GIGLGLG GSG
Sbjct: 1 MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
Query: 61 SGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGG 120
SGSGSGSGSSSSSSSSSYSSSS SGSGAGSEAGSYAGSRAGSGSG NRNGGSGSGSGYGG
Sbjct: 61 SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGG 120
Query: 121 GWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
G GRG GNGGGEGYGE HGYGEG GYGGG
Sbjct: 121 GSGRGSGNGGGEGYGEGHGYGEGRGYGGG 148
BLAST of CcUC06G122610 vs. NCBI nr
Match:
XP_023515819.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 157.9 bits (398), Expect = 6.9e-35
Identity = 123/149 (82.55%), Postives = 129/149 (86.58%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG------GSG 60
M SI SL + VCFLLSFSAI+S+ VARKDLG+DLGG+GVG+G GIGLGLG GSG
Sbjct: 1 MASINSL-IVVCFLLSFSAIVSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
Query: 61 SGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGG 120
SGSGSGSGSSSSSSSSSYSSSS SGSGAGSEAGSYAGSRAGS SG NRNGGSGSGSGYGG
Sbjct: 61 SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSASGRNRNGGSGSGSGYGG 120
Query: 121 GWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
G GRG GNGGGEGYGE HGYGEG GYGGG
Sbjct: 121 GSGRGSGNGGGEGYGEGHGYGEGRGYGGG 148
BLAST of CcUC06G122610 vs. ExPASy TrEMBL
Match:
A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 128/151 (84.77%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG----GSGSG 60
M SIKSLA+ VC LLSFS LSEG VARKDLGIDLGG+GVGLGAGIGLG+G GSGSG
Sbjct: 1 MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60
Query: 61 SGSGSGSSSSSSSSSYSSSSSSGSGAGSE----AGSYAGSRAGSGSGGNRNGGSGSGSGY 120
SGSGSGS SSSSSSSYSSSSSSGSGAGSE AGSYAGSRAGSGSGGNRNGGSG GSGY
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GGGWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
GGG GRGG NG GEGYGE HGYGEGHGYGGG
Sbjct: 121 GGGSGRGGSNGNGEGYGEGHGYGEGHGYGGG 151
BLAST of CcUC06G122610 vs. ExPASy TrEMBL
Match:
A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 5.2e-36
Identity = 129/152 (84.87%), Postives = 131/152 (86.18%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG----GSGSG 60
M SIKSLA+ VC LLSFSAILSEG VARKDLGIDLGGVGVGLG GIGLG+G GSGSG
Sbjct: 1 MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
Query: 61 SGSGSGSSSSSSSSSYSSSSSSGSGAGSE----AGSYAGSRAGSGSGGNRNGGSGSGSGY 120
SGSGSGS SSSSSSSYSSSSSSGSGAGSE AGSYAGSRAGSGSGGNRNGGSG GSGY
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GGGWGRGGG-NGGGEGYGEAHGYGEGHGYGGG 144
GGG GRGGG N GEGYGE HGYGEG GYGGG
Sbjct: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGG 152
BLAST of CcUC06G122610 vs. ExPASy TrEMBL
Match:
A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 8.8e-36
Identity = 124/149 (83.22%), Postives = 129/149 (86.58%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG------GSG 60
M SI SL + VCFLLSFS ILS+ VARKDLG+DLGG+GVG+G GIGLGLG GSG
Sbjct: 1 MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
Query: 61 SGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGG 120
SGSGSGSGSSSSSSSSSYSSSS SGSGAGSEAGSYAGSRAGSGSG NRNGGSGSGSGYGG
Sbjct: 61 SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGPNRNGGSGSGSGYGG 120
Query: 121 GWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
G GRG GNGGGEGYGE HGYGEG GYGGG
Sbjct: 121 GSGRGSGNGGGEGYGEGHGYGEGRGYGGG 148
BLAST of CcUC06G122610 vs. ExPASy TrEMBL
Match:
A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 124/169 (73.37%), Postives = 129/169 (76.33%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG------GSG 60
M SI SL + VCFLLSFS ILS+ VARKDLG+DLGG+GVG+G GIGLGLG GSG
Sbjct: 1 MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
Query: 61 SGSGSGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGG-------------- 120
SGSGSGSGSSSSSSSSSYSSSS SGSGAGSEAGSYAGSRAGSGSG
Sbjct: 61 SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRA 120
Query: 121 ------NRNGGSGSGSGYGGGWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
NRNGGSGSGSGYGGG GRG GNGGGEGYGE HGYGEG GYGGG
Sbjct: 121 GSGSGPNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 168
BLAST of CcUC06G122610 vs. ExPASy TrEMBL
Match:
A0A6J1JK06 (putative glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485793 PE=4 SV=1)
HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 104/145 (71.72%), Postives = 111/145 (76.55%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG--GSGSGSG 60
M S +L V +CFLLSFSAI+S+ VARKDLG+DLGG+GVG+G GIGLGLG GSGSGSG
Sbjct: 1 MASFNTLLV-LCFLLSFSAIVSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60
Query: 61 SGSGSSSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGGNRNGGSGSGSGYGGGWGR 120
SGSGS SSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSG NRN
Sbjct: 61 SGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSRAGSGSGRNRN--------------- 120
Query: 121 GGGNGGGEGYGEAHGYGEGHGYGGG 144
GGEGYGE HGYGEG GYGGG
Sbjct: 121 -----GGEGYGEGHGYGEGRGYGGG 124
BLAST of CcUC06G122610 vs. TAIR 10
Match:
AT4G30460.1 (glycine-rich protein )
HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 96/149 (64.43%), Postives = 109/149 (73.15%), Query Frame = 0
Query: 6 SLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLGGSGSGSGSGSGS-- 65
S + + +L+ S ++SE VARKDLG+DLGG+G G+G GIG+G GGSGSG+G+GSGS
Sbjct: 8 SSLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSGG 67
Query: 66 --SSSSSSSSYSSSSSSGSG---AGSEAGSYAGSRAGSGSGG----NRNGGSGSGSGYGG 125
SSSSSSSS SSSSSSG G AGSEAGSYAGS AGSGSGG R GSG G G+GG
Sbjct: 68 GGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHGG 127
Query: 126 GWGRGGGNGGGEGYGEAHGYGEGHGYGGG 144
G G GGG GGG G G GYGEG GYGGG
Sbjct: 128 GGGGGGGRGGGGGSGNGEGYGEGGGYGGG 156
BLAST of CcUC06G122610 vs. TAIR 10
Match:
AT4G30450.1 (glycine-rich protein )
HSP 1 Score: 74.3 bits (181), Expect = 9.4e-14
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0
Query: 1 MPSIKSLAVAVCFLLSFSAILSEGPVARKDLGIDLGGVGVGLGAGIGLGLG-----GSGS 60
M + L + ++S +L+E +ARKDLGIDLGG+G+GLG G+G+GLG G+G+
Sbjct: 1 MAKAEGLFLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGGGSGSGAGA 60
Query: 61 GSGSGSGSSSSSSSSSYSSSSSSGSG--AGSEAGSYAGSRAGSGSG 100
GSGSGSGS SSSSSSS SSSSSSGSG AGS AGS+AGSRAGSGSG
Sbjct: 61 GSGSGSGSRSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGSG 106
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879748.1 | 2.9e-41 | 92.41 | glycine-rich cell wall structural protein 2-like [Benincasa hispida] | [more] |
XP_008443813.1 | 4.3e-37 | 84.77 | PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo] | [more] |
XP_004146660.2 | 1.1e-35 | 84.87 | glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypoth... | [more] |
XP_022921883.1 | 1.8e-35 | 83.22 | putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita mosch... | [more] |
XP_023515819.1 | 6.9e-35 | 82.55 | putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3B9N0 | 2.1e-37 | 84.77 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A0A0LTK9 | 5.2e-36 | 84.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1 | [more] |
A0A6J1E521 | 8.8e-36 | 83.22 | putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos... | [more] |
A0A6J1E2L1 | 2.0e-32 | 73.37 | cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143... | [more] |
A0A6J1JK06 | 1.7e-26 | 71.72 | putative glycine-rich cell wall structural protein 1 isoform X2 OS=Cucurbita max... | [more] |