Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTTTCCTTTGCCAAAAAATGGTTACCTAAACAATATAATTGCAGTTTTCAATTGCAATAATGACCCCAAATGTTTCAAAATTTAATATCTTCCCCTATATCTAACCTTCCTTGGTCCCCCATTTTCTCCCACCAACCAAACACAGCCCCTCCCTCAACCCACAAAAACAAACACACACACCTAATTCAATCCTTCTTGAACCTTAGCTTTTACACACCCAAATTGAAACCATGGCGTCATTTAATGCATCTACAATGAAGTTACAACTTGTATTCTTCGTCTGCATAGTCATTTTAGCATCACCCCACGTTGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGACTGCACATCATTTATTTTCAAGGGGACAAGATGTGTGATTGATGTGATGAAGAACGCTGTTGCTCCTCATCCGTCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTCCTTTGAGTTTCTCAAAGACATTCCATCTGCTGACATGA
mRNA sequence
ATGACTCATCACCCCACGTTGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGACTGCACATCATTTATTTTCAAGGGGACAAGATGTGTGATTGATGTGATGAAGAACGCTGTTGCTCCTCATCCGTCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTCCTTTGAGTTTCTCAAAGACATTCCATCTGCTGACATGA
Coding sequence (CDS)
ATGACTCATCACCCCACGTTGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGACTGCACATCATTTATTTTCAAGGGGACAAGATGTGTGATTGATGTGATGAAGAACGCTGTTGCTCCTCATCCGTCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTCCTTTGAGTTTCTCAAAGACATTCCATCTGCTGACATGA
Protein sequence
MTHHPTLPDSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSKTFHLLT
Homology
BLAST of CcUC06G121560 vs. NCBI nr
Match:
KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])
HSP 1 Score: 84.3 bits (207), Expect = 4.3e-13
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 9 DSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
D T E+FSLL CTSFI + T C++DVMKNAVAPHPSCCKA SKLNDC F K
Sbjct: 32 DPFTAEEFSLLGCTSFISEATNCMVDVMKNAVAPHPSCCKAFSKLNDCSSEFLK 85
BLAST of CcUC06G121560 vs. NCBI nr
Match:
TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 9 DSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
D T E+ SLL CTSFI + T+CVIDVMKNAVAPHPSCCKA SKLNDC F K
Sbjct: 32 DPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHPSCCKAFSKLNDCSPEFLK 85
BLAST of CcUC06G121560 vs. NCBI nr
Match:
KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa])
HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0
Query: 9 DSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
D T E SLL CTSFI + T+CVIDVMKNAVAPHPSCCKA SKLNDC F K
Sbjct: 32 DPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAPHPSCCKAFSKLNDCSPEFLK 85
BLAST of CcUC06G121560 vs. NCBI nr
Match:
TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])
HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
Query: 1 MTHHPTL--PDSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPL 60
+T PT+ + T EDFSL C SF+ K T+CVIDV+KNAVAPHPSCC+AIS+L+DC
Sbjct: 24 VTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVAPHPSCCEAISQLHDCSS 83
Query: 61 SFSK 63
F K
Sbjct: 84 QFLK 87
BLAST of CcUC06G121560 vs. NCBI nr
Match:
KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 75.9 bits (185), Expect = 1.5e-10
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 12 TLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
T EDFSL C SF+ K T+CVIDV+KN VAPHPSCC+AI++L+DC F K
Sbjct: 37 TSEDFSLFPCISFVPKATKCVIDVLKNVVAPHPSCCEAITQLHDCSSQFLK 87
BLAST of CcUC06G121560 vs. ExPASy TrEMBL
Match:
A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13
Identity = 39/54 (72.22%), Postives = 42/54 (77.78%), Query Frame = 0
Query: 9 DSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
D T E+ SLL CTSFI + T+CVIDVMKNAVAPHPSCCKA SKLNDC F K
Sbjct: 32 DPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHPSCCKAFSKLNDCSPEFLK 85
BLAST of CcUC06G121560 vs. ExPASy TrEMBL
Match:
A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 6.1e-13
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0
Query: 9 DSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
D T E SLL CTSFI + T+CVIDVMKNAVAPHPSCCKA SKLNDC F K
Sbjct: 32 DPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAPHPSCCKAFSKLNDCSPEFLK 85
BLAST of CcUC06G121560 vs. ExPASy TrEMBL
Match:
A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 6.7e-12
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0
Query: 1 MTHHPTL--PDSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPL 60
+T PT+ + T EDFSL C SF+ K T+CVIDV+KNAVAPHPSCC+AIS+L+DC
Sbjct: 24 VTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVAPHPSCCEAISQLHDCSS 83
Query: 61 SFSK 63
F K
Sbjct: 84 QFLK 87
BLAST of CcUC06G121560 vs. ExPASy TrEMBL
Match:
A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 7.4e-11
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 12 TLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSFSK 63
T EDFSL C SF+ K T+CVIDV+KN VAPHPSCC+AI++L+DC F K
Sbjct: 37 TSEDFSLFPCISFVPKATKCVIDVLKNVVAPHPSCCEAITQLHDCSSQFLK 87
BLAST of CcUC06G121560 vs. ExPASy TrEMBL
Match:
A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 2.8e-10
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 1 MTHHPTLPDSTTLEDFSLLDCTSFIFKGTRCVIDVMKNAVAPHPSCCKAISKLNDCPLSF 60
M T+ + + D SL C SF+ K T CVIDV+KNAVAPHPSCC+AIS+L+DC F
Sbjct: 24 MARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQF 83
Query: 61 SK 63
K
Sbjct: 84 LK 85
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8653021.1 | 4.3e-13 | 70.37 | hypothetical protein Csa_004567 [Cucumis sativus] | [more] |
| TYK10330.1 | 5.6e-13 | 72.22 | hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa] | [more] |
| KAA0050078.1 | 1.3e-12 | 72.22 | hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa] | [more] |
| TYK10345.1 | 1.4e-11 | 59.38 | hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa] | [more] |
| KAA0050079.1 | 1.5e-10 | 64.71 | hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CG41 | 2.7e-13 | 72.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U483 | 6.1e-13 | 72.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CFS6 | 6.7e-12 | 59.38 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U9B0 | 7.4e-11 | 64.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CEQ4 | 2.8e-10 | 54.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
