Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA
mRNA sequence
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA
Coding sequence (CDS)
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA
Protein sequence
MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVIDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS
Homology
BLAST of CcUC06G121470 vs. NCBI nr
Match:
TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])
HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 91/112 (81.25%), Postives = 100/112 (89.29%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPLVLL+CIAILASSVTAR +V AA P ++DFSLFPCISFVP+ATKCV
Sbjct: 1 MATSAITKLPLVLLVCIAILASSVTARPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. NCBI nr
Match:
KAA0050063.1 (hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 164.9 bits (416), Expect = 4.1e-37
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPL+LL+CIAILASSVTAR +V AA P ++KDFSLFPCISFVP ATK V
Sbjct: 1 MATSAITKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS+DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. NCBI nr
Match:
KAE8653017.1 (hypothetical protein Csa_004564 [Cucumis sativus])
HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = 0
Query: 1 MATSATKLPLVL-LLCIAILASSVTARLGMVPAAAPN-PLVTKD-FSLFPCISFVPQATK 60
MATSATKLPLVL LLCIAILASSV AR MV AAAP+ PL T++ FSLFPCIS VPQATK
Sbjct: 1 MATSATKLPLVLILLCIAILASSVAARPPMVGAAAPSKPLGTEEYFSLFPCISLVPQATK 60
Query: 61 CVIDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSI 111
CVIDVL N VAPH SCCEAISKL DCSS FLKDIP+ MILVKSVCA WGVSI
Sbjct: 61 CVIDVLNNTVAPHPSCCEAISKLNDCSSNFLKDIPTGKMILVKSVCASWGVSI 113
BLAST of CcUC06G121470 vs. NCBI nr
Match:
KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPLVL +CIAILASSVTA +V AA P ++DFSLFPCISFVP+ATKCV
Sbjct: 1 MATSAITKLPLVLRVCIAILASSVTACPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKN VAPH SCCEAI++L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNVVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. NCBI nr
Match:
KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])
HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
MA S TKLPL LL CI ILASSV AR V AAAP D SLFPC SFVP+AT+CVI
Sbjct: 1 MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPE----GDISLFPCKSFVPKATECVI 60
Query: 61 DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61 DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match:
A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38
Identity = 91/112 (81.25%), Postives = 100/112 (89.29%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPLVLL+CIAILASSVTAR +V AA P ++DFSLFPCISFVP+ATKCV
Sbjct: 1 MATSAITKLPLVLLVCIAILASSVTARPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match:
A0A5A7U2D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00440 PE=4 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPL+LL+CIAILASSVTAR +V AA P ++KDFSLFPCISFVP ATK V
Sbjct: 1 MATSAITKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS+DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match:
A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0
Query: 1 MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
MATSA TKLPLVL +CIAILASSVTA +V AA P ++DFSLFPCISFVP+ATKCV
Sbjct: 1 MATSAITKLPLVLRVCIAILASSVTACPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60
Query: 61 IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
IDVLKN VAPH SCCEAI++L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61 IDVLKNVVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match:
A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 6.0e-34
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
MA S TKLPL LL CI ILASSV AR V AAAP D SLFPC SFVP+AT+CVI
Sbjct: 1 MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPE----GDISLFPCKSFVPKATECVI 60
Query: 61 DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61 DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match:
A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
MA S TKLPL LL CI ILASSV AR V AAAP D SLFPC SFVP+AT+CVI
Sbjct: 1 MAASFTKLPLALLFCIFILASSVMARPVTVAAAAP----IGDISLFPCKSFVPKATECVI 60
Query: 61 DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61 DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK10345.1 | 1.1e-37 | 81.25 | hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa] | [more] |
KAA0050063.1 | 4.1e-37 | 80.36 | hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa] | [more] |
KAE8653017.1 | 5.0e-35 | 81.42 | hypothetical protein Csa_004564 [Cucumis sativus] | [more] |
KAA0050079.1 | 5.0e-35 | 77.68 | hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa] | [more] |
KAA0050065.1 | 1.2e-33 | 75.68 | hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CFS6 | 5.2e-38 | 81.25 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U2D8 | 2.0e-37 | 80.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U9B0 | 2.4e-35 | 77.68 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U8Y3 | 6.0e-34 | 75.68 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CEQ4 | 1.0e-33 | 75.68 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |