CcUC06G121470 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G121470
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 23949520 .. 23949855 (+)
RNA-Seq ExpressionCcUC06G121470
SyntenyCcUC06G121470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA

mRNA sequence

ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA

Coding sequence (CDS)

ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCCTACTCTGCATAGCCATTCTAGCATCATCGGTAACGGCTCGCCTGGGAATGGTGCCAGCAGCAGCGCCTAATCCATTGGTAACAAAGGATTTCTCTTTGTTTCCTTGCATATCATTCGTTCCTCAGGCAACAAAATGTGTGATTGATGTGCTTAAGAATGCCGTTGCTCCCCACACTTCTTGTTGTGAAGCCATTTCTAAACTCTATGATTGTTCTTCCAAGTTTCTCAAAGACATTCCCTCTGAGGATATGATTTTGGTTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATTTCTTAA

Protein sequence

MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVIDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS
Homology
[Close]
BLAST of CcUC06G121470 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 91/112 (81.25%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPLVLL+CIAILASSVTAR  +V AA P    ++DFSLFPCISFVP+ATKCV
Sbjct: 1   MATSAITKLPLVLLVCIAILASSVTARPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. NCBI nr
Match: KAA0050063.1 (hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-37
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPL+LL+CIAILASSVTAR  +V AA P   ++KDFSLFPCISFVP ATK V
Sbjct: 1   MATSAITKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS+DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. NCBI nr
Match: KAE8653017.1 (hypothetical protein Csa_004564 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = 0 

Query: 1   MATSATKLPLVL-LLCIAILASSVTARLGMVPAAAPN-PLVTKD-FSLFPCISFVPQATK 60
           MATSATKLPLVL LLCIAILASSV AR  MV AAAP+ PL T++ FSLFPCIS VPQATK
Sbjct: 1   MATSATKLPLVLILLCIAILASSVAARPPMVGAAAPSKPLGTEEYFSLFPCISLVPQATK 60

Query: 61  CVIDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSI 111
           CVIDVL N VAPH SCCEAISKL DCSS FLKDIP+  MILVKSVCA WGVSI
Sbjct: 61  CVIDVLNNTVAPHPSCCEAISKLNDCSSNFLKDIPTGKMILVKSVCASWGVSI 113

[Close]
BLAST of CcUC06G121470 vs. NCBI nr
Match: KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPLVL +CIAILASSVTA   +V AA P    ++DFSLFPCISFVP+ATKCV
Sbjct: 1   MATSAITKLPLVLRVCIAILASSVTACPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKN VAPH SCCEAI++L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNVVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0 

Query: 1   MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
           MA S TKLPL LL CI ILASSV AR   V AAAP      D SLFPC SFVP+AT+CVI
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPE----GDISLFPCKSFVPKATECVI 60

Query: 61  DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61  DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

[Close]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38
Identity = 91/112 (81.25%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPLVLL+CIAILASSVTAR  +V AA P    ++DFSLFPCISFVP+ATKCV
Sbjct: 1   MATSAITKLPLVLLVCIAILASSVTARPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match: A0A5A7U2D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00440 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPL+LL+CIAILASSVTAR  +V AA P   ++KDFSLFPCISFVP ATK V
Sbjct: 1   MATSAITKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKNAVAPH SCCEAIS+L+DCSS+FLKDIPS+DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNAVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match: A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.4e-35
Identity = 87/112 (77.68%), Postives = 97/112 (86.61%), Query Frame = 0 

Query: 1   MATSA-TKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCV 60
           MATSA TKLPLVL +CIAILASSVTA   +V AA P    ++DFSLFPCISFVP+ATKCV
Sbjct: 1   MATSAITKLPLVLRVCIAILASSVTACPTIVAAATP---TSEDFSLFPCISFVPKATKCV 60

Query: 61  IDVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           IDVLKN VAPH SCCEAI++L+DCSS+FLKDIPS DMILVKS+CA WGVSIS
Sbjct: 61  IDVLKNVVAPHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICASWGVSIS 109

[Close]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.0e-34
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0 

Query: 1   MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
           MA S TKLPL LL CI ILASSV AR   V AAAP      D SLFPC SFVP+AT+CVI
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPE----GDISLFPCKSFVPKATECVI 60

Query: 61  DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61  DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

[Close]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0 

Query: 1   MATSATKLPLVLLLCIAILASSVTARLGMVPAAAPNPLVTKDFSLFPCISFVPQATKCVI 60
           MA S TKLPL LL CI ILASSV AR   V AAAP      D SLFPC SFVP+AT+CVI
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAP----IGDISLFPCKSFVPKATECVI 60

Query: 61  DVLKNAVAPHTSCCEAISKLYDCSSKFLKDIPSEDMILVKSVCALWGVSIS 112
           DVLKNAVAPH SCC+AIS+L+DCSS+FLKDIPS DMILVKS+CALWGVSIS
Sbjct: 61  DVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICALWGVSIS 107

The following BLAST results are available for this feature:
BLAST of CcUC06G121470 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10345.11.1e-3781.25hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa][more]
KAA0050063.14.1e-3780.36hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa][more]
KAE8653017.15.0e-3581.42hypothetical protein Csa_004564 [Cucumis sativus][more]
KAA0050079.15.0e-3577.68hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa][more]
KAA0050065.11.2e-3375.68hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
BLAST of CcUC06G121470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CFS65.2e-3881.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U2D82.0e-3780.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9B02.4e-3577.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8Y36.0e-3475.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEQ41.0e-3375.68Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CcUC06G121470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G121470.1CcUC06G121470.1mRNA