Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTAACACTTATATTCCATGTCTGCATATTCATTTTAGCACCATCAATGACGATCCACACAATGACAACAACAGTCTATTAGTATTTGAGGATCTCTCTTTCTCAAACTGCACACCCTTTATTTTAGAAGCGACAATGTATGTGGTAGATGTGATCAAGCTTCCAATTGGTCCTCATCCATCTTGTTGCAAAGCAATTCTAAGTTTAACGACTGTTCTCCTGAAATTTATCAACATATTCTTGGCATGA
mRNA sequence
ATGAGCACCATCAATGACGATCCACACAATGACAACAACAGTCTATTAGTATTTGAGGATCTCTCTTTCTCAAACTGCACACCCTTTATTTTAGAAGCGACAATGTATGTGGTAGATGTGATCAAGCTTCCAATTGGTCCTCATCCATCTTGTTGCAAAGCAATTCTAAGTTTAACGACTGTTCTCCTGAAATTTATCAACATATTCTTGGCATGA
Coding sequence (CDS)
ATGAGCACCATCAATGACGATCCACACAATGACAACAACAGTCTATTAGTATTTGAGGATCTCTCTTTCTCAAACTGCACACCCTTTATTTTAGAAGCGACAATGTATGTGGTAGATGTGATCAAGCTTCCAATTGGTCCTCATCCATCTTGTTGCAAAGCAATTCTAAGTTTAACGACTGTTCTCCTGAAATTTATCAACATATTCTTGGCATGA
Protein sequence
MSTINDDPHNDNNSLLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSLTTVLLKFINIFLA
Homology
BLAST of CcUC06G121460 vs. NCBI nr
Match:
KAA0050068.1 (hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa])
HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 14 SLLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
S L EDLSFSNCTPFIL+ATM VV VIK P+ PHPSCCKAI L
Sbjct: 39 SPLALEDLSFSNCTPFILDATMCVVSVIKFPVAPHPSCCKAISDL 83
BLAST of CcUC06G121460 vs. NCBI nr
Match:
KAA0050064.1 (hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 5.1e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 15 LLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+L+ +D SFSNC PFILEATM +VDVIKLP+ PHPSCCKAI L
Sbjct: 43 VLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAISDL 86
BLAST of CcUC06G121460 vs. NCBI nr
Match:
TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 5.1e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 15 LLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+L+ +D SFSNC PFILEATM +VDVIKLP+ PHPSCCKAI L
Sbjct: 43 VLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAISDL 86
BLAST of CcUC06G121460 vs. NCBI nr
Match:
KAE8653023.1 (hypothetical protein Csa_023561, partial [Cucumis sativus])
HSP 1 Score: 63.5 bits (153), Expect = 8.2e-07
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 17 VFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+ +DLSF +CTPFIL+AT+ +VDV K PI PHP CCKAI L
Sbjct: 41 ISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKAIFKL 82
BLAST of CcUC06G121460 vs. NCBI nr
Match:
KAE8653020.1 (hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypothetical protein Csa_004566, partial [Cucumis sativus])
HSP 1 Score: 63.5 bits (153), Expect = 8.2e-07
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 17 VFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+ +DLSF +CTPFIL+AT+ +VDV K PI PHP CCKAI L
Sbjct: 44 ISQDLSFFSCTPFILDATLCLVDVFKFPIAPHPFCCKAIFKL 85
BLAST of CcUC06G121460 vs. ExPASy TrEMBL
Match:
A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 5.0e-10
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 14 SLLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
S L EDLSFSNCTPFIL+ATM VV VIK P+ PHPSCCKAI L
Sbjct: 39 SPLALEDLSFSNCTPFILDATMCVVSVIKFPVAPHPSCCKAISDL 83
BLAST of CcUC06G121460 vs. ExPASy TrEMBL
Match:
A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 15 LLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+L+ +D SFSNC PFILEATM +VDVIKLP+ PHPSCCKAI L
Sbjct: 43 VLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAISDL 86
BLAST of CcUC06G121460 vs. ExPASy TrEMBL
Match:
A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 2.5e-09
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 15 LLVFEDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+L+ +D SFSNC PFILEATM +VDVIKLP+ PHPSCCKAI L
Sbjct: 43 VLLDQDSSFSNCAPFILEATMCMVDVIKLPVAPHPSCCKAISDL 86
BLAST of CcUC06G121460 vs. ExPASy TrEMBL
Match:
A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 2.1e-08
Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query: 19 EDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
+D SFSNC PFILEATM VVDVIKLP+ HPSCCKAI L
Sbjct: 48 DDSSFSNCAPFILEATMCVVDVIKLPVASHPSCCKAISDL 87
BLAST of CcUC06G121460 vs. ExPASy TrEMBL
Match:
A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 7.5e-06
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 19 EDLSFSNCTPFILEATMYVVDVIKLPIGPHPSCCKAILSL 59
++ F C PFILEAT+ V DVIK PI PHPSCCKAI L
Sbjct: 44 QNFPFLKCAPFILEATLCVTDVIKFPIAPHPSCCKAISKL 83
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0050068.1 | 1.0e-09 | 75.56 | hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa] | [more] |
KAA0050064.1 | 5.1e-09 | 72.73 | hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa] | [more] |
TYK10344.1 | 5.1e-09 | 72.73 | hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa] | [more] |
KAE8653023.1 | 8.2e-07 | 64.29 | hypothetical protein Csa_023561, partial [Cucumis sativus] | [more] |
KAE8653020.1 | 8.2e-07 | 64.29 | hypothetical protein Csa_004576, partial [Cucumis sativus] >KGN65427.2 hypotheti... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U475 | 5.0e-10 | 75.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7U4A7 | 2.5e-09 | 72.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CGL7 | 2.5e-09 | 72.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LTD6 | 2.1e-08 | 77.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1 | [more] |
A0A5A7U9A1 | 7.5e-06 | 65.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |