CcUC06G120480 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G120480
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 22180139 .. 22185200 (-)
RNA-Seq ExpressionCcUC06G120480
SyntenyCcUC06G120480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGCTTTAAGTTACAAGATCCATGTGAAGATGAAAAAAGTTACAACTAGAAAGCATCATTCAAGATAAATAAACTGCGTTCAACAAATCTCTAAGCACAGCTCGGGTGAGGAGAAGAATTCGACAACAAAAGAAAAGCAATATTCGGAATTTGCCACGCCATGCCTGGGCCGCTTCATAAGACAATTCTACTTCCAAAGCTTTCGTAACGACATGTTCTTTTCTGATTCCTTCTTCATCACCTTGGCAACAGCCATCTCAAAATCTTCCTGAGTCACGTGAACCCTTCTTTCCCTCAAAGCAAACATCCCTGCTTCTGTACACACAGCCTGCATTCAATCACAAAATACGCCACCAATTAGTGTATGTAAACACTCTACTGTTAATCGCGGCTACACTTTCTTTAATAATCATGAGTGTAGTGTTTGGACCGTCTTGCGCACACCTCAAATAATCTCACAGGATAACCTACCAGCCTTACTACATTTGCATGCCAAAAGACCTTGTAGGATATTAAATCTTAAATAGGTCACTATAAATTTGAATTGATTTCTATGACCCTTATTGACCACTAAGTTAAGCCATGTTTAATGACGATTAGGTGAATATCCAGATAAGCATTAGATCCTAGAGCATTTTATTTGTAGCTAGAGAGCGTCTAGTCCTTCGGCCATTTTCCTCCCGGAGTTCATAGAGATTATGTTTCACTTAAAATGCTACACTTTAAAGCTAGAGCAAACACTCTTACCATTAATAGTAGTTGATGTAGAACAATATATACACGAACACTAAGACTTCTTTCAAAATATCATGATCAAAAGATTAATATACCTTGAGCTCTGCACCAGATGCGCCATTCATCTTCTCAGCAATTTTCTTCAAATCAATCCCACGCATCAAATTCATTTTCCGGGAATGTATTTTCAAGATATCAAACCGGGACTGCATTTCCGTAAGAACTGAATGTCAGTATCTCAATATAGTAAGAGCAACTGTGATTGATACCACTCCTAAGTCCCAACAGTGCAAGCCTTATCCGGGAGTAAATTAGAACAGGAAAATATGTAGGCAAAGCATTCCCAAACTGACATAAGTGGCTTTTATCTTTCTACTCCAAACAAATTTAGATTCCTTTCAGGCCAACAGTCACAAAGTTAAAAACATGTAAAATTAATTGTATTCCTATAATATTCTTTGAAAAACAAAAGTATATACTGAAACAAGTAGTGGTACTTACATCCTCGTTAGGATTTGGGAATTCAATCTTCCTGTCAATTCGTCCTGGCCTTAGGAGAGCTTGATCCAGAATATCAATCCTATTGGTGGCCATTAAAACCTGTAAAAAGTCCAAGCAGTTAGAAACAAATTTTAGATGAAAAATCCTACTCCCAGATAATCTATAATCAGATTACTAAAAGTCAAGAGACATTAAGTGCCTCGTTAATTCCAGGAATTGAATGGCTTTAGTACAAACAGGAAAAAGAAAAACATTTCAATATTTTAAAGGGTCTTCAAGTCAGTGAGTCCAATTTTTAGCCTCAGGGCTTGCTCCTTTAATTCACAAGAAGCATAAGCACTATGAAAATAATGGAATGGAATCTTTGAAACTTGGGTATTGATTGCAGGGAAATTAATATGTAGTTAATTGTTCAAAACGAAAACGATCTACTTATATTTGTGATACAAATACAACATGAGTTGCAGTAATTTAACCCTTCGTGACTTTTACCACTACAATTCAAGAAAAGCACAAACAAAAGTTATAGAGTATGTAGATCCTAAGGGACGATACGATGATGTTAAGAATAATGTATAAAATCTTAGGAAAGGCATACATTTTCCCTTCAATATAATCTATTTGCGATGGCTATACACTTCAATTACTGGATTTTTTTGGATTAAATAGACGCTTACAAGTTATACCTCATATCATATCACTAAAAGACAAAAACTTAACCTATCAAGATAATAAGTCTCAAGGCTGCATCTAACCTTTCAAAACATTGGTTGATTAAAAAAATCTAGAGTATCATTTATTCAGTGTTAAGTCTTTTTTGTTTCAATAATTGAGAAAGATCTAATCAATGTTAGTCATAAGATATATTCAAGTGTCATATTTTCCATCATTCACATATGGAGTTTATTTATTGTACCTTGATCTTATTTGATGCTTCAAATCCATCAAGCTGGTTAAGAAGTTCCAGCATAGTACGCTGCACCTCACTATCACCATTACCACTCCCAGATTCCATTCTAGCAGACCCAATACTATCAATTTCATCCATGAAAATGATAGAAGGTGCATGCTCCCTGTAGAGGAAAATTAATAAATGGTTGGAATAGGTTCAATAAAAATATGCTTACAATTAAATCAACAAGACTGACACATCTAAAGATATAATCTTCCAGGTTTGGTTTCCGACATTATTTCGCAGTTTGGTCAAATGTTTTTATGGGTTGAAAATGAAATCCTAGACTACCCATTTCCACTAAATAAATATTTGGCACCGAAAGACCCATTCGTGATTTTGATTCTAGTCAATAATGGCAGTCAAGAAAAAGAGTCCCCATACATGCACAAAAGCAAGGAGGTTAGGGTCAACTACACCGAGTGGAAGACTTAATAATGAAGCACAGTAGAGAACATCAGAACAAACCTGGCCATGACAAAAAGCTCTCTGACCATTCTAGAACCTTCTCCAATATATTTCTGGACCAACTCAGACCCAGAAACCCTGATGAAAGTACAATCTGTATGGTGAGCCACTGCTCTAGCCAACAGTGTCTTCCCCGTACCAGGTGGTCCATATAGCAAGACACCCTATTTGAAGGGTATGGTGAGAGATATAGGATCAACGTATATATCAAGAAACTAGTATATAAAATAACATTGTTGCATTGCACGAAGTGTTACCTTTGGTTGAGCTATTCCAAGACTCTCAAAAAGTTCGGGATGCTTAATGGGGAGTTCAATAACCTGCAGATTGGAACTAATATTTCATAACTTACAGATTATTGACTAATAAGTAGTTGACATAAATAAGAAGACTATTTGCAACATACAAACCTCTTTTATTTCTTTTATTTGCTGGTCGAGACCACCAATCATATCATAAGTTGAATCAGGAACCTTTTCGACTTTCATAAGATTAACAAGTGGATCTACTTTGCTTGGCAGGACTAAATGAAGAACATAGCTGTCATTACGGAGAGCTACTCGAGTTGAAGGTGTAATTTTTGTGATATCAATACTTTTGTCAATATCAACAACATATTTCCCTTCTGGATGAACCTGCGCAGGTGAACAAAGAGAAGTTGGAAAAGAAAAAAAGAAAAAAGAAAAAAGAAGTCCCGTACAAGTTGAGATTGAACGTTTTGAAATTAAACTTCTAAGATTGTAGTGCCATAGACATACAAATTTGAATTGCTGAATAATAGTAAGATGCCAACACTAATTATTTGAAGCACGACATGGCCAGGTTCTATTTCCCGGAAAGTATCAGAATCAAGCCTCAGTATTTTTGAACAACATGAACTCGATGAATGCAACTTAAGCACATTTTCACCTTTTAACTCTAGAATATTGAACTCTACAGAAAAGGAGTTTCCACAAAAGTTCTTATAAAATATCAACTTGTATCCCAAGGCGTTGAGGGAGTGAGGGAGGGAAAGGGAGTGGTAAATTGGTAATGCATTAATACTTTATTTAAATTATTATGATTTCCTGTAATAAAGAAAGAAGAAAAGGCCACTCACCTTAACTAAAACTTTGTTCTTTCCCATGACTTTAACAACTTCACCAACATAAGATCCTGGCTCTTGAAGCAGCTGCAGCTCTTCCCGGAGCATGCGTACTGTAAATATTAATATAAGTTACAATGCAATAACCTCAACTAGATCACAAGTCCAACAGACTAATGTTGGGATTCCAATTCCTAGGAAATAAAAAAATAGTTTAGATTAAGTACACTAAAAATTGAAGTGAGGAAAACACTTTCACTAATACGTAATACCTTTTGAAGCATTATTTGAGTAAAAAAAAACCATTGTTTCTATGTTATTATAAAAGAATCACTATTTCTGGTTCATCTTATTTTGAAGTAACGAAGTATATCCCATGGTGAAACCATAAGCAGACATCTTACAAATAATAAAGCCCAGTATCATAAGTTTTTCCAAGATTCTATCAATAAGCTACTGAATTGCAAGATCTAAAAAGCTGAAGATACACAGATATTTACTCGGACAGTTATTCAAAGAGGACAATAACATAAAAGTTCAATTATAAATATAGTTATAGTATAAGCTGGATACGAAAAAGTGAGAATAATTTTCATTACTCATCAATGACCAGTCTTAATTGCTCTCCTGAAAATGAAGATTGGTTACAGCCCTATAGGATTTCAATTCCAAGAGTCCAAGATCAAGACATATGGACTCTTCTCCCAACAAATTTCAGATTCAAAGGCACCGCTAAGCGGTTTTCAATAATTTATAATTAGAACAAATGACATGAAGAGAGAATTTCAAATCCAAGAACACTTCGCTCGTTGAAGAAGGGAACTGGGCAGGACATCCACAAAAATTTTATAAGAATGAAAGAGAACTGATTAATTGTTCTCGTATCTTCCTTTGGAGTATTCAAGTTTTTACCTTTTTTCCCCTAATTCACTTTTCTCATTAGTTGCCCCAGGGTTCAACTCTAATAGCTTCTTAATTATGTAACCATTCTTTACCGGAGCAAACAAAAAATATGAAATTTGTGAGAAACCAGAGGTAGCCAAAAAAAATTCACAAACCCTGGAGGTAAACTAAGACATTCAAAATTCAAAATTGATTCGTACCTTTCGAATTTAGCTCGTTCCGCTGAGCTTCAAGACGATTCAGATTATGGGTCTTTTGACGGACCTGGAGCTGGAGCTCGTGAATATGTTGCAGATAGTACTGCCTCAGACCCTCACCTTGTTTCGTCGCCTGTTTCGCCGAACAAGTATCGAACGACGCCGACGTCGGTTGCTGGGTCTCGACCTCCATTGTCGCCATTGGAAGAGAAGTAA

mRNA sequence

ATGACTCGTTCCGCTGAGCTTCAAGACGATTCAGATTATGGGTCTTTTGACGGACCTGGAGCTGGAGCTCGTGAATATGTTGCAGATAGTACTGCCTCAGACCCTCACCTTGTTTCGTCGCCTGTTTCGCCGAACAAGTATCGAACGACGCCGACGTCGGTTGCTGGGTCTCGACCTCCATTGTCGCCATTGGAAGAGAAGTAA

Coding sequence (CDS)

ATGACTCGTTCCGCTGAGCTTCAAGACGATTCAGATTATGGGTCTTTTGACGGACCTGGAGCTGGAGCTCGTGAATATGTTGCAGATAGTACTGCCTCAGACCCTCACCTTGTTTCGTCGCCTGTTTCGCCGAACAAGTATCGAACGACGCCGACGTCGGTTGCTGGGTCTCGACCTCCATTGTCGCCATTGGAAGAGAAGTAA

Protein sequence

MTRSAELQDDSDYGSFDGPGAGAREYVADSTASDPHLVSSPVSPNKYRTTPTSVAGSRPPLSPLEEK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G120480.1CcUC06G120480.1mRNA