Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCAGTACCAAACAGCGCGTACCCGACACGAGTGTCCTCACCAAGGAGCATTCCGAACACGGCGGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGCGATATTGGGGCATTGCTTAGAATGGCGAAGAAGGTAGCGGAGGCGGTGAGATTAAGCAAAAAGGGGAGAGTGTATTGCCAGATAGAGAGGAGCTTGAGCCATCGACGGAGGGAGGAGAGGAATTTGGTTGAATTGGAGGAAGATTTGAGAGCTTGA
mRNA sequence
ATGAGAGCAGTACCAAACAGCGCGTACCCGACACGAGTGTCCTCACCAAGGAGCATTCCGAACACGGCGGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGCGATATTGGGGCATTGCTTAGAATGGCGAAGAAGGTAGCGGAGGCGGTGAGATTAAGCAAAAAGGGGAGAGTGTATTGCCAGATAGAGAGGAGCTTGAGCCATCGACGGAGGGAGGAGAGGAATTTGGTTGAATTGGAGGAAGATTTGAGAGCTTGA
Coding sequence (CDS)
ATGAGAGCAGTACCAAACAGCGCGTACCCGACACGAGTGTCCTCACCAAGGAGCATTCCGAACACGGCGGTGGCAGCAAAAGTAGTGGCGTTGGTGACCGGAACGGCGAGCGATATTGGGGCATTGCTTAGAATGGCGAAGAAGGTAGCGGAGGCGGTGAGATTAAGCAAAAAGGGGAGAGTGTATTGCCAGATAGAGAGGAGCTTGAGCCATCGACGGAGGGAGGAGAGGAATTTGGTTGAATTGGAGGAAGATTTGAGAGCTTGA
Protein sequence
MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYCQIERSLSHRRREERNLVELEEDLRA
Homology
BLAST of CcUC06G118640 vs. NCBI nr
Match:
KAG6428663.1 (hypothetical protein SASPL_112916 [Salvia splendens])
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 55/71 (77.46%), Postives = 60/71 (84.51%), Query Frame = 0
Query: 1 MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGR 60
MR VPNSA PTRVSSPR IP TAVAAKVVALVTGTA++IG L +AKKVAEA R + GR
Sbjct: 10 MRQVPNSASPTRVSSPRMIPKTAVAAKVVALVTGTATEIGESLNIAKKVAEADRFTTNGR 69
Query: 61 VYCQIERSLSH 72
VYCQI+RSLSH
Sbjct: 70 VYCQIKRSLSH 80
BLAST of CcUC06G118640 vs. NCBI nr
Match:
RXI05944.1 (hypothetical protein DVH24_017986 [Malus domestica])
HSP 1 Score: 91.7 bits (226), Expect = 3.5e-15
Identity = 61/98 (62.24%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 1 MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGR 60
++AVPN A P V SP+S PNTAVAA VVALVTGTA +IG L MAKKVAEA RL+KKG
Sbjct: 5 IKAVPNIARPRWVCSPKSKPNTAVAANVVALVTGTAREIGVWLSMAKKVAEAERLTKKGT 64
Query: 61 VYCQIERSLSHRRREERNLVEL----------EEDLRA 89
VYCQI RSLS RE R+L + EEDLRA
Sbjct: 65 VYCQIARSLSQLVREARSLWWIGPGWARAWAEEEDLRA 102
BLAST of CcUC06G118640 vs. NCBI nr
Match:
KAF9827179.1 (hypothetical protein H0E87_016793 [Populus deltoides])
HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query: 4 VPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYC 63
VP+ A TRVSSP+SIPNTAVAA VVALVTGTA D+G L+MAKK+AEA RLSKKGR YC
Sbjct: 6 VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65
Query: 64 QIERSLSHRRREERN 79
Q +R LS EER+
Sbjct: 66 QNKRRLSQLLSEERS 80
BLAST of CcUC06G118640 vs. NCBI nr
Match:
KAF9864746.1 (hypothetical protein H0E87_024280 [Populus deltoides])
HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query: 4 VPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYC 63
VP+ A TRVSSP+SIPNTAVAA VVALVTGTA D+G L+MAKK+AEA RLSKKGR YC
Sbjct: 6 VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65
Query: 64 QIERSLSHRRREERN 79
Q +R LS EER+
Sbjct: 66 QNKRRLSQLLSEERS 80
BLAST of CcUC06G118640 vs. NCBI nr
Match:
TKS10737.1 (hypothetical protein D5086_0000080730 [Populus alba])
HSP 1 Score: 90.5 bits (223), Expect = 7.8e-15
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 4 VPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYC 63
VP+ A TRVSSP+SIPNTAVAA VVALVTGTA D+G L+MAKK+AEA RLSKKGR YC
Sbjct: 6 VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65
Query: 64 QIERSLSHRRREERNL---------VELEEDLR 88
Q +R LS EER+ E EED R
Sbjct: 66 QNKRRLSQLLSEERSFWWNFGGDEREEEEEDFR 98
BLAST of CcUC06G118640 vs. ExPASy TrEMBL
Match:
A0A498KHR2 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017986 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 61/98 (62.24%), Postives = 68/98 (69.39%), Query Frame = 0
Query: 1 MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGR 60
++AVPN A P V SP+S PNTAVAA VVALVTGTA +IG L MAKKVAEA RL+KKG
Sbjct: 5 IKAVPNIARPRWVCSPKSKPNTAVAANVVALVTGTAREIGVWLSMAKKVAEAERLTKKGT 64
Query: 61 VYCQIERSLSHRRREERNLVEL----------EEDLRA 89
VYCQI RSLS RE R+L + EEDLRA
Sbjct: 65 VYCQIARSLSQLVREARSLWWIGPGWARAWAEEEDLRA 102
BLAST of CcUC06G118640 vs. ExPASy TrEMBL
Match:
A0A6M2EE18 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 2.2e-15
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query: 4 VPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYC 63
VP+ A TRVSSP+SIPNTAVAA VVALVTGTA D+G L+MAKK+AEA RLSKKGR YC
Sbjct: 6 VPSKARSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65
Query: 64 QIERSLSHRRREERN 79
Q +R LS EER+
Sbjct: 66 QNKRRLSQLLSEERS 80
BLAST of CcUC06G118640 vs. ExPASy TrEMBL
Match:
A0A4U5QN65 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000080730 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 3.8e-15
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 4 VPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGRVYC 63
VP+ A TRVSSP+SIPNTAVAA VVALVTGTA D+G L+MAKK+AEA RLSKKGR YC
Sbjct: 6 VPSKAKSTRVSSPKSIPNTAVAANVVALVTGTARDMGVSLKMAKKIAEAERLSKKGREYC 65
Query: 64 QIERSLSHRRREERNL---------VELEEDLR 88
Q +R LS EER+ E EED R
Sbjct: 66 QNKRRLSQLLSEERSFWWNFGGDEREEEEEDFR 98
BLAST of CcUC06G118640 vs. ExPASy TrEMBL
Match:
A0A022QWP3 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016904mg PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 5.4e-14
Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 1 MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGR 60
MR VPN A PTRVSSPR IP TAVAA VVA VTGTA ++G ++M KKVA+A R +KG+
Sbjct: 24 MRRVPNKARPTRVSSPRMIPKTAVAANVVAFVTGTAKEMGVSIKMPKKVADADRFIRKGK 83
Query: 61 VYCQIERSLSH 72
VYCQI S +H
Sbjct: 84 VYCQINTSFNH 94
BLAST of CcUC06G118640 vs. ExPASy TrEMBL
Match:
A0A118JVW5 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_004055 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.0e-12
Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MRAVPNSAYPTRVSSPRSIPNTAVAAKVVALVTGTASDIGALLRMAKKVAEAVRLSKKGR 60
M+ VP PTRVSSP +IPNTAVAA VVALVTGTA +IG LR+ KK AEA RL++KG
Sbjct: 1 MKKVPKRVNPTRVSSPSNIPNTAVAANVVALVTGTAREIGVSLRIEKKAAEADRLTRKGT 60
Query: 61 VYCQIERSLSHRRR 75
YCQ +R L+ R
Sbjct: 61 EYCQTKRRLNQSMR 74
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6428663.1 | 2.2e-17 | 77.46 | hypothetical protein SASPL_112916 [Salvia splendens] | [more] |
RXI05944.1 | 3.5e-15 | 62.24 | hypothetical protein DVH24_017986 [Malus domestica] | [more] |
KAF9827179.1 | 4.6e-15 | 70.67 | hypothetical protein H0E87_016793 [Populus deltoides] | [more] |
KAF9864746.1 | 4.6e-15 | 70.67 | hypothetical protein H0E87_024280 [Populus deltoides] | [more] |
TKS10737.1 | 7.8e-15 | 62.37 | hypothetical protein D5086_0000080730 [Populus alba] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A498KHR2 | 1.7e-15 | 62.24 | Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017986 PE=4 SV=1 | [more] |
A0A6M2EE18 | 2.2e-15 | 70.67 | Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1 | [more] |
A0A4U5QN65 | 3.8e-15 | 62.37 | Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000080730 PE=4 SV=1 | [more] |
A0A022QWP3 | 5.4e-14 | 64.79 | Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016904mg PE... | [more] |
A0A118JVW5 | 3.0e-12 | 62.16 | Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_004... | [more] |
Match Name | E-value | Identity | Description | |