CcUC06G117170 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G117170
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	S-protein homolog
Location	CicolChr06: 9373514 .. 9373942 (+)
RNA-Seq Expression	CcUC06G117170
Synteny	CcUC06G117170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCGTTTTCAACATTTGTACTATGTCTTTTGATATCAGTGGTTTTCGCTAGCCTATTCACTGTTCAAGGAAAACCCTTCCAATCCCCACCGATTACGGTTAACATCACAAATGCTCTAAAAGGTCAGAATAATCAACTTACTGTTCACTGCAAATCTGGCGATGATGACTTGGGAGTCCACCAACTCCCACATTTGATTAGTTACGCCTTCACTTTTCGACCAAACTTTTGGGGTTCAACCTTGTTTTATTGTACCTTTCAATGGCCTGGTTGGACACATTACTTCGATATCTACAAGGATTCAAGAGATAGAACGCGTTGCAATGAAACTTTGTGTTTGTGGATTGTGGGTGAAGAAGGTATCTGTATGTTCAACTATGGCACCAAAAAATATGATATTTGCTATACGTGGTTGGCTAAATGA

mRNA sequence

ATGGGTTCGTTTTCAACATTTGTACTATGTCTTTTGATATCAGTGGTTTTCGCTAGCCTATTCACTGTTCAAGGAAAACCCTTCCAATCCCCACCGATTACGGTTAACATCACAAATGCTCTAAAAGGTCAGAATAATCAACTTACTGTTCACTGCAAATCTGGCGATGATGACTTGGGAGTCCACCAACTCCCACATTTGATTAGTTACGCCTTCACTTTTCGACCAAACTTTTGGGGTTCAACCTTGTTTTATTGTACCTTTCAATGGCCTGGTTGGACACATTACTTCGATATCTACAAGGATTCAAGAGATAGAACGCGTTGCAATGAAACTTTGTGTTTGTGGATTGTGGGTGAAGAAGGTATCTGTATGTTCAACTATGGCACCAAAAAATATGATATTTGCTATACGTGGTTGGCTAAATGA

Coding sequence (CDS)

ATGGGTTCGTTTTCAACATTTGTACTATGTCTTTTGATATCAGTGGTTTTCGCTAGCCTATTCACTGTTCAAGGAAAACCCTTCCAATCCCCACCGATTACGGTTAACATCACAAATGCTCTAAAAGGTCAGAATAATCAACTTACTGTTCACTGCAAATCTGGCGATGATGACTTGGGAGTCCACCAACTCCCACATTTGATTAGTTACGCCTTCACTTTTCGACCAAACTTTTGGGGTTCAACCTTGTTTTATTGTACCTTTCAATGGCCTGGTTGGACACATTACTTCGATATCTACAAGGATTCAAGAGATAGAACGCGTTGCAATGAAACTTTGTGTTTGTGGATTGTGGGTGAAGAAGGTATCTGTATGTTCAACTATGGCACCAAAAAATATGATATTTGCTATACGTGGTTGGCTAAATGA

Protein sequence

MGSFSTFVLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFNYGTKKYDICYTWLAK

Homology

[Close]

BLAST of CcUC06G117170 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60
Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MGSFSTFVLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLG 60
           M SFSTF L L IS++FA++FT++GKPFQSPP+TVNITNALK  NNQLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLPHLISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGE 120
           VHQL HL SYAF FRPNFWGSTLFYC F W G +HYF+IY+D RDR +CN+TLCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 EGICMFNYGTKKYDICYTW 140
           +G+CMF+Y T  YDICYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of CcUC06G117170 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 6.4e-51
Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 20  LFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFW 79
           LFT++GKPFQ+P +TVNITNAL    +QLTVHCKSGDDDLG+HQL  L  YAFTFRPNF 
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALT-HKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI 60

Query: 80  GSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFNYGTKKYDICYTW 139
           G+TLFYCTFQWPGW+H FDIYKDSRDR RCN  LCLWIVGE+G+CMF+Y TKKYD CYTW
Sbjct: 61  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGVCMFHYVTKKYDFCYTW 120

Query: 140 LAK 143
           + K
Sbjct: 121 VDK 121

[Close]

BLAST of CcUC06G117170 vs. NCBI nr
Match: XP_008460739.1 (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-50
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 33  ITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFYCTFQWPG 92
           +TVNITN + G NNQLTVHCKSGDDDLGVH+LPHL+SY FTFRPNFWGSTLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 93  WTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFNYGTKKYDICYTW-LAK 143
           W HYFDIYKDSRD  RCN+TLCLWI+ E+GICMFNY TK YD CY W LAK
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWPLAK 111

[Close]

BLAST of CcUC06G117170 vs. NCBI nr
Match: XP_022975116.1 (S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975441.1 S-protein homolog 3-like, partial [Cucurbita maxima])

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41
Identity = 80/112 (71.43%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 13  ISVVFASLF-TVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYA 72
           +S+ F +LF T+ G  F+ PPITVNITN L+  +NQLTVHCKSGDDDLG+HQLP+L  YA
Sbjct: 1   MSLSFTTLFTTIDGSIFKDPPITVNITNVLE-SHNQLTVHCKSGDDDLGIHQLPYLGGYA 60

Query: 73  FTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGI 124
           FTFRPNFWG+T FYCTFQWPG++ YFDIYKD RDR +CN+TLCLWIVG++GI
Sbjct: 61  FTFRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of CcUC06G117170 vs. NCBI nr
Match: XP_023522352.1 (S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.3 bits (451), Expect = 4.6e-41
Identity = 82/122 (67.21%), Postives = 97/122 (79.51%), Query Frame = 0


Query: 1   MGSFSTFVLCLLISVVFASLF-TVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDL 60
           M SFST    LL+S+ F +LF T+ G  F+ PP+TVNITN LK  +NQL V CKS DDDL
Sbjct: 30  MNSFSTLAFALLMSLFFTTLFTTIDGSIFKDPPMTVNITNVLK-SHNQLAVRCKSSDDDL 89

Query: 61  GVHQLPHLISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVG 120
            +HQLP L  YAFTF+PNFWGST FYCTF+W G++HYFDIYKD+RDRT+CN TLCLWIVG
Sbjct: 90  RIHQLPPLGGYAFTFQPNFWGSTQFYCTFEWSGFSHYFDIYKDNRDRTKCNNTLCLWIVG 149

Query: 121 EE 122
           E+
Sbjct: 150 EQ 150

[Close]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 28  FQSPPITVNITNALKGQNNQLTV--HCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFY 87
           F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++
Sbjct: 43  FPTSKRTVEINNDL---GNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYF 102

Query: 88  CTFQWPGWTHYFDIYKDSRDR---TRCNETLCLWIVGEEGICMFNYGTKKYDICYTW 140
           C+F WP  +H FDIYKD RD     +C    C+W +   G C FN  TK++D+CY W
Sbjct: 103 CSFSWPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.3e-21
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           V+ LLI + F+ + T     + +  + V ITN L G    L +HCKS DDDLG+  L   
Sbjct: 13  VIYLLIKIAFSQVKTDFDVNWSTSKM-VRITNRL-GDGLTLNLHCKSADDDLGLKILAPN 72

Query: 68  ISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETL--CLWIVGEEGICM 127
            S++F FR +  G+TLFYC F WPG +  FDIY D RD  R + +   C+W +  +G CM
Sbjct: 73  GSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCM 132

Query: 128 FNYGTKKYDICYTW 140
           F+     ++ICY W
Sbjct: 133 FSESDHAFNICYDW 144

[Close]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           V+ LLI + F+ +       + +    V ITN L G  + L +HCKS DDDLG+  L   
Sbjct: 13  VIYLLIQIAFSQVKPGSDLKWSTLKSVVTITNRL-GDGSTLKLHCKSADDDLGLKILAPN 72

Query: 68  ISYAFTFRPNFW-GSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNE--TLCLWIVGEEGIC 127
            S++F FRP+   G TLF+C F WPG + +F+IY D RD  R       C+W +G+ G C
Sbjct: 73  GSWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC 132

Query: 128 MFNYGTKKYDICYTW 140
            F+     ++ICY W
Sbjct: 133 RFSEIDDAFNICYDW 146

[Close]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-18
Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           ++C    ++F S +   G P       V +TN + G    LT+HCKS  DDLG+H +P  
Sbjct: 6   IVCFFFFLLFGSGY--GGLPPFWRATVVTMTNLIGGP--PLTIHCKSKQDDLGIHVVPFK 65

Query: 68  ISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFN 127
             Y F F+PN W STLF+C+FQW      FDIY   RD+  C++  C W +  +G C   
Sbjct: 66  QEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD--CQWEIKPDGPCRLG 125

Query: 128 YGTKKYDICYTW 140
              K    C+ W
Sbjct: 126 KKAK----CFPW 127

[Close]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-16
Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 5   STFVLCLLISVVFASLFTVQG-KPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQ 64
           S+ +  +L  ++F  + +  G  PF    +TV  TN +  Q   LT+ C+S DDDLG H 
Sbjct: 4   SSKIFVVLSIILFYVISSCHGYNPFAKTVVTV--TNNISPQTT-LTISCRSKDDDLGEHL 63

Query: 65  LPHLISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGI 124
           L H  ++ + FRP+++ +TLF C F W     +FD Y+  RD+  C    C W +  +  
Sbjct: 64  LLHGQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYS--CNWSINADSA 123

Query: 125 CMFNYGTKKYDICYTW 140
           C+     KK+D CY W
Sbjct: 124 CISGNFNKKFDRCYPW 134

[Close]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.6e-61
Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 1   MGSFSTFVLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLG 60
           M SFSTF L L IS++FA++FT++GKPFQSPP+TVNITNALK  NNQLT+HCKSGDDDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHQLPHLISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGE 120
           VHQL HL SYAF FRPNFWGSTLFYC F W G +HYF+IY+D RDR +CN+TLCLWIVGE
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRAKCNDTLCLWIVGE 161

Query: 121 EGICMFNYGTKKYDICYTW 140
           +G+CMF+Y T  YDICYTW
Sbjct: 162 QGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 20  LFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFW 79
           LFT++GKPFQ+P +TVNITNAL    +QLTVHCKSGDDDLG+HQL  L  YAFTFRPNF 
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALT-HKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI 60

Query: 80  GSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFNYGTKKYDICYTW 139
           G+TLFYCTFQWPGW+H FDIYKDSRDR RCN  LCLWIVGE+G+CMF+Y TKKYD CYTW
Sbjct: 61  GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-GLCLWIVGEQGVCMFHYVTKKYDFCYTW 120

Query: 140 LAK 143
           + K
Sbjct: 121 VDK 121

[Close]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 33  ITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFYCTFQWPG 92
           +TVNITN + G NNQLTVHCKSGDDDLGVH+LPHL+SY FTFRPNFWGSTLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 93  WTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFNYGTKKYDICYTW-LAK 143
           W HYFDIYKDSRD  RCN+TLCLWI+ E+GICMFNY TK YD CY W LAK
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWPLAK 111

[Close]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL
Match: A0A6J1IDA7 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.9e-42
Identity = 80/112 (71.43%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 13  ISVVFASLF-TVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYA 72
           +S+ F +LF T+ G  F+ PPITVNITN L+  +NQLTVHCKSGDDDLG+HQLP+L  YA
Sbjct: 1   MSLSFTTLFTTIDGSIFKDPPITVNITNVLE-SHNQLTVHCKSGDDDLGIHQLPYLGGYA 60

Query: 73  FTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGI 124
           FTFRPNFWG+T FYCTFQWPG++ YFDIYKD RDR +CN+TLCLWIVG++GI
Sbjct: 61  FTFRPNFWGTTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL
Match: A0A6J1IDI1 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.9e-41
Identity = 80/112 (71.43%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 13  ISVVFASLF-TVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYA 72
           +S+ F +LF T+    F+ PPITVNITN L+  +NQLTVHCKSGDDDLG+HQLP+L  YA
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLE-SHNQLTVHCKSGDDDLGIHQLPYLGGYA 60

Query: 73  FTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGI 124
           FTFRPNFWGST FYCTFQWPG++ YFDIYKD RDR +CN+TLCLWIVG++GI
Sbjct: 61  FTFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of CcUC06G117170 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 107.5 bits (267), Expect = 9.2e-24
Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 28  FQSPPITVNITNALKGQNNQLTV--HCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFY 87
           F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++
Sbjct: 43  FPTSKRTVEINNDL---GNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYF 102

Query: 88  CTFQWPGWTHYFDIYKDSRDR---TRCNETLCLWIVGEEGICMFNYGTKKYDICYTW 140
           C+F WP  +H FDIYKD RD     +C    C+W +   G C FN  TK++D+CY W
Sbjct: 103 CSFSWPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CcUC06G117170 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.3 bits (251), Expect = 6.6e-22
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           V+ LLI + F+ + T     + +  + V ITN L G    L +HCKS DDDLG+  L   
Sbjct: 13  VIYLLIKIAFSQVKTDFDVNWSTSKM-VRITNRL-GDGLTLNLHCKSADDDLGLKILAPN 72

Query: 68  ISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETL--CLWIVGEEGICM 127
            S++F FR +  G+TLFYC F WPG +  FDIY D RD  R + +   C+W +  +G CM
Sbjct: 73  GSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCM 132

Query: 128 FNYGTKKYDICYTW 140
           F+     ++ICY W
Sbjct: 133 FSESDHAFNICYDW 144

[Close]

BLAST of CcUC06G117170 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           V+ LLI + F+ +       + +    V ITN L G  + L +HCKS DDDLG+  L   
Sbjct: 13  VIYLLIQIAFSQVKPGSDLKWSTLKSVVTITNRL-GDGSTLKLHCKSADDDLGLKILAPN 72

Query: 68  ISYAFTFRPNFW-GSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNE--TLCLWIVGEEGIC 127
            S++F FRP+   G TLF+C F WPG + +F+IY D RD  R       C+W +G+ G C
Sbjct: 73  GSWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC 132

Query: 128 MFNYGTKKYDICYTW 140
            F+     ++ICY W
Sbjct: 133 RFSEIDDAFNICYDW 146

[Close]

BLAST of CcUC06G117170 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-19
Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 8   VLCLLISVVFASLFTVQGKPFQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHL 67
           ++C    ++F S +   G P       V +TN + G    LT+HCKS  DDLG+H +P  
Sbjct: 6   IVCFFFFLLFGSGY--GGLPPFWRATVVTMTNLIGGP--PLTIHCKSKQDDLGIHVVPFK 65

Query: 68  ISYAFTFRPNFWGSTLFYCTFQWPGWTHYFDIYKDSRDRTRCNETLCLWIVGEEGICMFN 127
             Y F F+PN W STLF+C+FQW      FDIY   RD+  C++  C W +  +G C   
Sbjct: 66  QEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDD--CQWEIKPDGPCRLG 125

Query: 128 YGTKKYDICYTW 140
              K    C+ W
Sbjct: 126 KKAK----CFPW 127

[Close]

BLAST of CcUC06G117170 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.9 bits (224), Expect = 8.9e-19
Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 28  FQSPPITVNITNALKGQNNQLTVHCKSGDDDLGVHQLPHLISYAFTFRPNFWGSTLFYCT 87
           F +P  TV I N L G +  L  HCKS +DDLG   +    +++F FRP+ +G TLF+C 
Sbjct: 23  FDNPRTTVVIYNDL-GGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCG 82

Query: 88  FQWPGWTHYFDIYKDSRDR--TRCNETLCLWIVGEEGICMFNYGTKKYDICYTW 140
           F W    H+FDIYK SRDR         C W + ++G C  N  +  +D+C  W
Sbjct: 83  FIWDKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPW 135

The following BLAST results are available for this feature:

BLAST of CcUC06G117170 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61530.1	1.2e-60	75.54	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_008465559.1	6.4e-51	76.42	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
XP_008460739.1	4.1e-50	79.28	PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]	[more]
XP_022975116.1	2.1e-41	71.43	S-protein homolog 3-like, partial [Cucurbita maxima] >XP_022975285.1 S-protein h...	[more]
XP_023522352.1	4.6e-41	67.21	S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC06G117170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.3e-22	45.30	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	9.3e-21	41.04	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	1.8e-19	39.26	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
O23020	5.7e-18	37.12	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
P0DN93	1.8e-16	34.56	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]

BLAST of CcUC06G117170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI28	5.6e-61	75.54	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A1S3CP53	3.1e-51	76.42	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A1S3CDK4	2.0e-50	79.28	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]
A0A6J1IDA7	9.9e-42	71.43	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474089 PE=3 SV=1	[more]
A0A6J1IDI1	2.9e-41	71.43	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1	[more]

BLAST of CcUC06G117170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	9.2e-24	45.30	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	6.6e-22	41.04	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.2e-20	39.26	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	4.0e-19	37.12	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	8.9e-19	40.35	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..139 e-value: 2.3E-32 score: 111.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 14..125
None	No IPR available	PANTHER	PTHR31232:SF53	S-PROTEIN HOMOLOG 29-RELATED	coord: 14..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G117170.1	CcUC06G117170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane