CcUC05G107480 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G107480
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RING-type domain-containing protein
Location	CicolChr05: 34458505 .. 34462954 (+)
RNA-Seq Expression	CcUC05G107480
Synteny	CcUC05G107480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGCGGCGGACGGCACGGCGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGGTCTCAAGTTCATGTTTTGCAAGCACTTTCAAAGATTTATGATCCTAGGCTTTCTAAATATTGATATATCTTTTTTTTTTTCTTTTCCTATTTTTCTTTTTTTTTTTTTTCCTGTTTTTCTCAAGTCTTGTATCCAGAAAAAAAAAAAAAAAAAAAGATTAATTGGCTTTTTGGCCACCTTCATATAACATACATACACATTATATATATGTATGGGATGATGTATGTATGTATTTAATGTGTAGATATCACATGACTCAATATCTACTACCATTGTCTTCCTTAATTAGCAAATCAAGATTAATTCAAGGTTCTTCCCCTACCATTGTTCAAATTTTCTGTTTTATTTTGTTCTATGCCAAATCAACACAACTTAACTAGCATATAAATGTGCTAGTGATCATGAGTTCCATACTTCGAATCTTTCAATCCCAAATTTTATTAGGAAAAGAGTTTTTCAGATCGAATCCTTCTAGAATTGTAATTGATGTATTATCGTAGAAATTGAGGTCCTAAGAGAAATTAAAATACTTTTAAGAAATATGAACTATAGTAGCAGTTCATCTAGTCTAGTAGCGGTTTCACAAGTAAATACGGTGTTTTTAAAAATTGCTAGAATCAAAATGTAAAACTTTTGCATCAAATGTAAAATTCCTTGAATGGTCATGTTTTCTTGCGCTGAAAATTGTATTTCAAGGTAAATTTGTTCCAATAACTTTTGTATTATGTTGGTTAATAAGTCACTTACTAATTAGGTTGGATACTGAGAAGCATTTGAATCTAATTTGTGCATTTAAAGCATTACAAATCAATAGATATGAGTGTAAAGGATAAAGGGAAAAAATGGTGTGGTTGAGTTGCAGCCACAATAAATATAGAAGAAAATTAAAATATGTGAAATTGAAAAAATAAATGGAAAAAAGTGGAAGAAATGAGAGGGAAGTTTTGGGAAGAGGACAAGAGCCATTGGTGTTTCAAAATTCATAGACCAAAGTGGCTGTTTACCTCAAAATTCCTTCGTCTAAATGGATAATTCTCTCTTCTGACCTTTTCCTTTTTTCTCTATACATTCTTAATTTTCTAATTCACAAAATTATTGTTATTTTCAAGCTTTCTTTGAAGGTCTTTTTTTAAACTTTGAAATTGTGCAATTTAAAATAAATAAATCTAGTTGATGAGCTAGAACACAACTTTAATCCATTGTGGAGCCTAGACTTATTATTTCATCAACTAATTTATACTTTCTTAAGTTGGATTTCTTAGTTTGTTGGAAGGTTGCTAAAAATATATAAGATTATGCATAATTTAATTTAGTACTAAAGTTTACTAGCATATATATTAGACATAGTGATAGACTACTACAAACTAGTCTTTATTATTATATAATTTCAATGATAACAAAAATTTATAATAAAGATTTCCTCATTTATTTACAATAATGTATATATACACACATTTGAAGTTAACTAATACATTAACGAAAATTTAGAAAAGAAAAAAATGGTCATAAAGGTGTAAAAATCTATTTTTTTTTTCCAATTTTCATCATTTTAGAAAGGGAATTAGAAAATTTCATAATTTTATCAAACATATTTTTAGTTGTTAATGACATACAAAGTTAAGTTAAATTACATGCTTAATTCTATAAATTTTAGAATGTTAAAAAGTATCTAATGATGGATTCATGAACTTATAATTTTATCTCTAAGTTCTTAAAATTTTTTTTTTTAAGATTCACAAAGTTATATAAAAATTCAAATGTTAAGATCTTTTACCTTATAAAATTTAAAATTTTAAAACTTTAAAAATATTCAAGAAGGCAAAAACTTATTCAAGGACTTTGATAAATTTAAGTCATGAAAGCCTACAGGTAGGCACAAAAAAGTTTAAAAGTAAGGATTAAAATGGAAATATCAATAAAATGGTGATGTAAATGGATAATTCTTAAAAGATTATATATAAGAACAAAAAACATCAAAAACTATGTTTAGATTAATAAATAAAATGTTCTATAATTTCTAAACAAGATCATAGAGATTTGTAAACAAGTTAACATGTCTATTATATTTATATCAATGATAGACTTTTGAAATAATTTCTATTTATAGTCTTTTTTTTTTTTTTTACTTTTAATATAATAGAAATATTGGTTCTAACCCTTATATCAAAATTTGTATAAAGTATTGAAAATATGGAGATAGCAACATAAATTTAATAGTGGCTAACAAGAAGAAAATGATTTAAAACCTTGAGACCTTGTTTGGAAAGGATTCCGATTCTACTCTAATAGTCTTTCCTATTCCACACGCGAGCGGAATCCAAATTTAAACCACGTCGGTGGTTACCAAAGCCATATCCCAAACAAGTTACTAAACACCGACCCATCGGCCATCGTTTCCCCTTCTGGAAGCTGCTAACCTTTTCACACCTGGGGCTTCGCCACTGAACCAAACCAATTTGATTTGATTTCTGTGCCAATTTTGAGCCATTCCATTGAAGCCAAACTCCAACGCCATACTATCATACTCTTCTAAAACCTTCAATAGAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCCCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTGCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCTAGTGGATTTCCCGATGACCCAGGTTGGTAAATTGTAAATTTGACCTTGCCAGGTGCGAGGGCTCTTCATTTCTTTTTTTGAAATACCAAGCTTCCCAGTTCCAATTTGACCATGAATTGAAGTTTGGGCGTTCTGGGCAGTGAAAATTCTCTGTCTGTAGTCTAGCAATTTTCATTCTTACTGTAATTTTGAAGTTCAGGGTTTTGATTTTCATTACCCACATGAATTGGCTTTCTTGTCAATGCAATATATCTATATATATAGTTTGTCAATTGCTTGTTTGCCTCAATGCAAGAAGTGCTTTGGCTTAGAGGAAAACGTGGCAGAAGACAACTGATATTAGAAGGATTTCAAGTAGTTGGCTCAGTGTTGGATCGAAGGAGAAAAAAATGGTGCGGAATTAATTATGTTGGCATTTTAAAATGTATTTTGTTCATCCTCAAACCAGAGATTCTCTGGTTAGTCCCTCTATTTCCCCTTTGCATTCTTCTTCTTCTTCTTCATTAGCATTTACCAGTTACTACCAAAAACAAGAACCAACTCCACTCACTTCCTCTAGCAGTAAAATAAGCCCTGCAGTTCTTTTAGTAATAGTTATTCTGGCACTTTTCCTTTTCATCTCTGGTCTTCTTCACTTGCTAGTGAAATTACTTGTAAAGCAACGTTCCTCATCATCATCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTCCCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTGGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACGCATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGGAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTATTCAATGGGGTCCTATCAGTATATTGTGGCTGCTTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAACGAAAGCTTTTCTGTTTCAAAAATCTGGTTGTGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

mRNA sequence

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGCGGCGGACGGCACGGCGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGCCAAACTCCAACGCCATACTATCATACTCTTCTAAAACCTTCAATAGAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCCCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTGCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCTAGTGGATTTCCCGATGACCCAGGTTGTGAAATTACTTGTAAAGCAACGTTCCTCATCATCATCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTCCCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTGGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACGCATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGGAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTATTCAATGGGGTCCTATCAGTATATTGTGGCTGCTTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAACGAAAGCTTTTCTGTTTCAAAAATCTGGTTGTGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

Coding sequence (CDS)

ATGGAATATTATAATAATTGTGAGAGCAAAGGAATTGGGAAGGTGAAGTGGCAGAGGAGAGGGAGGCGCGGCGGACGGCACGGCGGCGGCGGCGGCTCCGTCCAAATGAAGATGAGAAAGCTGCAGCGGCTGATCCCCGGCGGACGGAGGCTGAAACCGGACCGCTTATTCTTGAAAACTGCTGATTATATAATGCAATTGAGCCAAACTCCAACGCCATACTATCATACTCTTCTAAAACCTTCAATAGAACAATCCAATTCCCTTTCCCCAATTAATCACCCATTTCCCCCTTCTTCTTCACTCTTCTGTTTCCCATTTCGCTGTTACAATGCTATTGCCTTGACCCACCGCAATCGCTCTGCAACTCAGGGATTCTCTCGAAACTCCCTGAATCATATGCCACATGCAGTTCCAGCTCCATTTCTAGTGGATTTCCCGATGACCCAGGTTGTGAAATTACTTGTAAAGCAACGTTCCTCATCATCATCAATGTCTGAATCCAATAGCAATAGATTCCCAGAAATGTCTGAATCATCTGCTTTTCAAAGACAGTTACAACAGCTCTTCCATCTTCATGATTCAGGTCTAGATCAAGCCTTCATAGATGCACTCCCTGTTTTCCTTTACAAAGAGATAGTGGGTTTAAAAGAACCGTTTGATTGTGCTGTATGTCTTTGTGAATTTTCAGAACTGGACAAGCTAAGATTGCTCCCTACTTGCAGTCATGCTTTTCACATTGATTGTATAGACGCATGGTTGCTTTCTAATTCAACTTGCCCTCTTTGTAGAGGGACCCTTCACATTCACTCACCTGGACTTGCCATAGAAAACCCTGTATATGGTTTTGAAGATTCAGAAGAGACAGAAGAATCTACAGAGGATGGAAGATTTGGTATTCCTACAGCTCAAAAAGCTCCAGAGAGTGACATTATTGGTGAAAAAAGAGTGTTTTCAATCAGGCTTGGGAAATTTAGGAACTTGAATAATGGAGGATTGAGAGGATTAGAGAAAGGAGAGGGAGAAACCAGCAGTAGCAGTTTGAGTGCAAGAAGATGCTATTCAATGGGGTCCTATCAGTATATTGTGGCTGCTTCAGAGTTGCAAGTTGCGTTACGTACGAGTAATCGCATCTGTGGGGGAAGTATGAGATTTGTGAAAGTAATAAGAGATTCACAAACTGGGAATTGTCCAATTGATGGTGATGATGATGCTGAGGGGAAGAAGATTAACATTGGAAGTAAAAACGAAAGCTTTTCTGTTTCAAAAATCTGGTTGTGGTCCAAGAAGACTCGACAGCCAAGTGGTTCAGACACCCATGTGCGAGCTAGTTAA

Protein sequence

MEYYNNCESKGIGKVKWQRRGRRGGRHGGGGGSVQMKMRKLQRLIPGGRRLKPDRLFLKTADYIMQLSQTPTPYYHTLLKPSIEQSNSLSPINHPFPPSSSLFCFPFRCYNAIALTHRNRSATQGFSRNSLNHMPHAVPAPFLVDFPMTQVVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS

Homology

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BLAST of CcUC05G107480 vs. NCBI nr
Match: XP_038893199.1 (RING-H2 finger protein ATL46-like [Benincasa hispida])

HSP 1 Score: 535.8 bits (1379), Expect = 3.5e-148
Identity = 273/294 (92.86%), Postives = 281/294 (95.58%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 210
           +V+LLVKQRSSSSS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY
Sbjct: 73  LVRLLVKQRSSSSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 132

Query: 211 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIH 270
           KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID WLLSNSTCPLCRGTL  H
Sbjct: 133 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTL--H 192

Query: 271 SPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNN 330
           SP LAIENPVYGFE+SEETE STEDGRFGIPTA KA ES+IIGE+RVFSIRLGKFRNLNN
Sbjct: 193 SPVLAIENPVYGFEESEETEVSTEDGRFGIPTAHKASESEIIGERRVFSIRLGKFRNLNN 252

Query: 331 GGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVIR 390
           GGLRGLEK EGETSSSSLSARRCYSMGSYQYIVA SELQVALRTSNR  GGSMRFVKVIR
Sbjct: 253 GGLRGLEKEEGETSSSSLSARRCYSMGSYQYIVADSELQVALRTSNRNGGGSMRFVKVIR 312

Query: 391 DSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS 445
           DSQ GNCPID DDDA+GKKINIGSKNESFSVSKIWLWSKK+RQPSGSDTHVRAS
Sbjct: 313 DSQIGNCPIDDDDDADGKKINIGSKNESFSVSKIWLWSKKSRQPSGSDTHVRAS 364

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BLAST of CcUC05G107480 vs. NCBI nr
Match: KAA0034330.1 (RING-H2 finger protein ATL46 [Cucumis melo var. makuwa] >TYK15589.1 RING-H2 finger protein ATL46 [Cucumis melo var. makuwa])

HSP 1 Score: 533.9 bits (1374), Expect = 1.3e-147
Identity = 284/355 (80.00%), Postives = 293/355 (82.54%), Query Frame = 0


Query: 131 LNHMPHAVPAPFLVDFPMTQV--------------------------------------- 190
           +NH+ HAVPA FLVDFPM QV                                       
Sbjct: 1   MNHIAHAVPASFLVDFPMPQVAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLFI 60

Query: 191 -------VKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFID 250
                  V+LLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFID
Sbjct: 61  SGLLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFID 120

Query: 251 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLC 310
           ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCID WLLSNSTCPLC
Sbjct: 121 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLC 180

Query: 311 RGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLG 370
           RGTLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLG
Sbjct: 181 RGTLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLG 240

Query: 371 KFRNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSM 430
           KFRNLNNGGLRGLEKGEGETSSSSL+ARRCYSMGSYQYIVA SELQVAL TSNRI GGSM
Sbjct: 241 KFRNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSM 300

Query: 431 RFVKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RFVKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 301 RFVKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 355

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BLAST of CcUC05G107480 vs. NCBI nr
Match: XP_004135477.1 (RING-H2 finger protein ATL46 [Cucumis sativus] >KGN51821.1 hypothetical protein Csa_008432 [Cucumis sativus])

HSP 1 Score: 523.9 bits (1348), Expect = 1.4e-144
Identity = 269/289 (93.08%), Postives = 276/289 (95.50%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 210
           +V+LLVKQRSSSSS+SESNSNRFP++SE SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL
Sbjct: 71  LVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 130

Query: 211 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHI 270
           YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID WLLSNSTCPLCRGTLHI
Sbjct: 131 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLHI 190

Query: 271 HSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLN 330
            SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKFRNLN
Sbjct: 191 QSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKFRNLN 250

Query: 331 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVI 390
           NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVA SELQVAL TSNRI GGSMRFVKVI
Sbjct: 251 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRFVKVI 310

Query: 391 RDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 311 RDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

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BLAST of CcUC05G107480 vs. NCBI nr
Match: XP_008446237.1 (PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo])

HSP 1 Score: 522.3 bits (1344), Expect = 4.0e-144
Identity = 268/289 (92.73%), Postives = 276/289 (95.50%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 210
           +V+LLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL
Sbjct: 71  LVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 130

Query: 211 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHI 270
           YKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCID WLLSNSTCPLCRGTLHI
Sbjct: 131 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLHI 190

Query: 271 HSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLN 330
            SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKFRNLN
Sbjct: 191 QSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKFRNLN 250

Query: 331 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVI 390
           NGGLRGLEKGEGETSSSSL+ARRCYSMGSYQYIVA SELQVAL TSNRI GGSMRFVKVI
Sbjct: 251 NGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRFVKVI 310

Query: 391 RDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 311 RDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

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BLAST of CcUC05G107480 vs. NCBI nr
Match: XP_022151161.1 (RING-H2 finger protein ATL47 [Momordica charantia] >XP_022151162.1 RING-H2 finger protein ATL47 [Momordica charantia])

HSP 1 Score: 489.2 bits (1258), Expect = 3.8e-134
Identity = 253/294 (86.05%), Postives = 267/294 (90.82%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 210
           +V+ LVKQR S SS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY
Sbjct: 66  LVRFLVKQR-SPSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 125

Query: 211 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIH 270
            EIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID WLLSNSTCPLCRGTL  +
Sbjct: 126 TEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTL--Y 185

Query: 271 SPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNN 330
           SPGLAIENP++GFEDSE TE S EDGR G+PTAQK PE+D+ GEKRVFSIRLGKFRNLNN
Sbjct: 186 SPGLAIENPIFGFEDSEGTEGSAEDGRIGVPTAQKPPENDMYGEKRVFSIRLGKFRNLNN 245

Query: 331 GGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVIR 390
           GG+RGLEKGEGETSSSSL ARRCYSMGSYQYIVA S+LQVALRTSNR  G SMRFV+  R
Sbjct: 246 GGVRGLEKGEGETSSSSLGARRCYSMGSYQYIVADSDLQVALRTSNRTGGRSMRFVRA-R 305

Query: 391 DSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS 445
           DSQTGN  I  DDDAEGKKINIGSKNESFSVSKIWLWSKK RQP GSD H+RA+
Sbjct: 306 DSQTGNSLI--DDDAEGKKINIGSKNESFSVSKIWLWSKKARQPIGSDVHLRAN 353

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BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.7e-74
Identity = 165/285 (57.89%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 210
           +V+  +K++ S+ S S + SN+ PE S+S  +QRQLQQLFHLHDSGLDQA IDALPVFLY
Sbjct: 73  LVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLY 132

Query: 211 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIH 270
           KEI G KEPFDCAVCLCEFSE DKLRLLP CSHAFHIDCID WLLSNSTCPLCRGTL   
Sbjct: 133 KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL--F 192

Query: 271 SPGLAIENPVYGFEDSEETEESTEDGRFGIPTA--QKAPESDIIGEKRVFSIRLGKFRN- 330
           S G   E P + F        + +DG  G+  +  QK  E++I   KRVFS+RLGKFR+ 
Sbjct: 193 SLGHQFEYPDFNFGFF-----AGDDGGGGVRVSPVQKPAENEI--GKRVFSVRLGKFRSS 252

Query: 331 --LNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRF 390
             +NNG +  +  G GETSSSSL  RRC+SMGSYQYIVA S+L VAL  +N         
Sbjct: 253 NIVNNGEV--VVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNE-------- 312

Query: 391 VKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKK 431
                        +  + D EGKKIN+ SK ESFSVSKIW WS K
Sbjct: 313 ------------GLKNNKDVEGKKINMRSKGESFSVSKIWQWSNK 326

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BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-73
Identity = 171/318 (53.77%), Postives = 213/318 (66.98%), Query Frame = 0


Query: 142 FLVDFPMTQVVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 201
           F +   +  +V+ L+K  S+++S   S SNRFPE+S S A QRQLQQLFHL+DSGLDQAF
Sbjct: 56  FFISGLLHLLVRFLIKHPSATAS---SRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAF 115

Query: 202 IDALPVFLYKEIVG----------LKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID 261
           IDALPVF YKEIVG           +EPFDCAVCLCEFSE DKLRLLP CSHAFH++CID
Sbjct: 116 IDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCID 175

Query: 262 AWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEES-TEDGRFGIPTAQKAPE-S 321
            WL SNSTCPLCRGTL   SPG ++ENP++ F+D  E EE  TE+G      +QK  E  
Sbjct: 176 TWLQSNSTCPLCRGTL--FSPGFSMENPMFDFDDIREDEEGVTENG------SQKTMEIQ 235

Query: 322 DIIGEKRVFSIRLGKFRNLNN-GGLRGLE-KGEGETSSSSLSARRCYSMGSYQYIVAASE 381
           +I+ EK V  +RLGKF+ L+N G  +G +    GETSSS+L ARRC+SMGSYQYI+  SE
Sbjct: 236 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 295

Query: 382 LQVALRTSNRICGGSMRFVKVIRDS-QTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWL 441
           L+V    ++R+     R     ++S QTGN         + KKIN  +K ESFSVSKIWL
Sbjct: 296 LKVPF-ANDRL----PRLKPQDKESEQTGN-----SSSEDNKKINTVAKGESFSVSKIWL 352

Query: 442 WSKKTRQPSGSDTHVRAS 445
           W KK +  S +   + +S
Sbjct: 356 WPKKDKFSSDAQRRLPSS 352

[Close]

BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 5.8e-45
Identity = 131/318 (41.19%), Postives = 164/318 (51.57%), Query Frame = 0


Query: 165 MSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKE-PFDCA 224
           ++ S+ +R       +A Q QLQQLFHLHDSG+DQ+FID LPVF YK I+GLK  PFDCA
Sbjct: 76  LTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCA 135

Query: 225 VCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIHSPGLAIENPVYGF 284
           VCLCEF   DKLRLLP CSHAFH+DCID WLLS+STCPLCR +L   S   + ++P   F
Sbjct: 136 VCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSL--LSDLSSHQDPRSSF 195

Query: 285 ---EDSEETEESTEDGRFGIPTAQKAPESDI--------------IGEKRV--------- 344
               +S     S E G      A  A   DI              +G  R+         
Sbjct: 196 LLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYL 255

Query: 345 -------------FSIRLGKFRNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIV- 404
                        FS++LGKFRN++ G   G        +SSSL  RRC+SMGSY+YI+ 
Sbjct: 256 DGELGGSVGKVVPFSVKLGKFRNIDIG--EGTSSNNNIGNSSSLDERRCFSMGSYEYIMD 315

Query: 405 AASELQVALRT-----SNRICGGSMRFVKVIRDSQTGNCPIDGDDD----AEGKKINIGS 433
             + L+V + T      NR   G    +       TG     G        E  + N+  
Sbjct: 316 EETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNV-V 375

[Close]

BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.3e-43
Identity = 119/300 (39.67%), Postives = 165/300 (55.00%), Query Frame = 0


Query: 165 MSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLK-EPFDCA 224
           ++ S  +R       +A Q QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 68  LTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 127

Query: 225 VCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTL--------HIHSPGLA 284
           VCLCEF   DKLRLLP CSHAFH++CID WLLS+STCPLCR  L        ++ S  L 
Sbjct: 128 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLL 187

Query: 285 I---------------ENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRV-FS 344
           +                N   G++ + ++E +    R G  +     + D + EK V   
Sbjct: 188 VLESEQSSRDMVPVLESNSQLGYDVNNDSESTRI--RSGRKSCDPDGDMDGLDEKVVPLE 247

Query: 345 IRLGKFRNLNNGGLRGLEKGEGETS--SSSLSARRCYSMGSYQYIVAASELQVALRTSNR 404
           ++LGKFRN+++ G  G ++ +   S  S ++  RRC SMGSY+YI+   E  + +  S +
Sbjct: 248 VKLGKFRNIDHVG-EGSDQKKNSISGNSKNVDGRRCLSMGSYEYIM-DQEATLKVHVSTK 307

Query: 405 ICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
              G  R    +   +T       D   +G + ++  + ESFS+SKIWL  KK +Q   S
Sbjct: 308 KLSGKDR----VPSHRTVMSECGFDPTVKGIEKSV-VERESFSLSKIWLRGKKEKQKGTS 358

[Close]

BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 2.4e-38
Identity = 101/226 (44.69%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 159 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLK 218
           R SS+     + N  P++   S+   QLQ LF LHDSGLDQ  IDALPVFLY  + + L+
Sbjct: 145 RKSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLE 204

Query: 219 EPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTL------HIHS 278
           +PFDCAVCL EFS+ DKLRLLP CSHAFH+ CID WLLSNSTCPLCR +L      + HS
Sbjct: 205 QPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHS 264

Query: 279 PGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNG 338
             L    P+ G        +  +DG+  +              KRVFS+RLG+F++ N  
Sbjct: 265 ETLVA--PLSG-------HQQVDDGKASL-------------AKRVFSVRLGRFKSTNES 324

Query: 339 GLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNR 378
                ++ + +        RRCYSMG+ QY+V   +  VAL +S R
Sbjct: 325 ---QSQRHDVKDEIGVRMPRRCYSMGTQQYLVCDQDFVVALSSSPR 343

[Close]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL
Match: A0A5D3CZH7 (RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00840 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 6.5e-148
Identity = 284/355 (80.00%), Postives = 293/355 (82.54%), Query Frame = 0


Query: 131 LNHMPHAVPAPFLVDFPMTQV--------------------------------------- 190
           +NH+ HAVPA FLVDFPM QV                                       
Sbjct: 1   MNHIAHAVPASFLVDFPMPQVAYDIDYQKLEPTPPSTSSSSKISPAVLLVIVILALFLFI 60

Query: 191 -------VKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFID 250
                  V+LLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFID
Sbjct: 61  SGLLHLLVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFID 120

Query: 251 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLC 310
           ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCID WLLSNSTCPLC
Sbjct: 121 ALPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLC 180

Query: 311 RGTLHIHSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLG 370
           RGTLHI SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLG
Sbjct: 181 RGTLHIQSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLG 240

Query: 371 KFRNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSM 430
           KFRNLNNGGLRGLEKGEGETSSSSL+ARRCYSMGSYQYIVA SELQVAL TSNRI GGSM
Sbjct: 241 KFRNLNNGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSM 300

Query: 431 RFVKVIRDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RFVKVIRDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 301 RFVKVIRDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 355

[Close]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL
Match: A0A0A0KVN9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602200 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 6.7e-145
Identity = 269/289 (93.08%), Postives = 276/289 (95.50%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 210
           +V+LLVKQRSSSSS+SESNSNRFP++SE SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL
Sbjct: 71  LVRLLVKQRSSSSSISESNSNRFPDLSESSSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 130

Query: 211 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHI 270
           YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID WLLSNSTCPLCRGTLHI
Sbjct: 131 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTLHI 190

Query: 271 HSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLN 330
            SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKFRNLN
Sbjct: 191 QSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKFRNLN 250

Query: 331 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVI 390
           NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVA SELQVAL TSNRI GGSMRFVKVI
Sbjct: 251 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRFVKVI 310

Query: 391 RDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 311 RDSQTGNCPIDRDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL
Match: A0A1S3BE30 (RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103489027 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 2.0e-144
Identity = 268/289 (92.73%), Postives = 276/289 (95.50%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSE-SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 210
           +V+LLVKQRSSSSS+SESNSNRFPE+SE SSAFQRQLQQLFHLHDSGLDQAFIDALPVFL
Sbjct: 71  LVRLLVKQRSSSSSISESNSNRFPELSESSSAFQRQLQQLFHLHDSGLDQAFIDALPVFL 130

Query: 211 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHI 270
           YKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCID WLLSNSTCPLCRGTLHI
Sbjct: 131 YKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCRGTLHI 190

Query: 271 HSPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLN 330
            SP LAIENPVYGFEDSEETEESTE+GRFGI TAQKAPESDIIGEKRVFSIRLGKFRNLN
Sbjct: 191 QSPVLAIENPVYGFEDSEETEESTENGRFGILTAQKAPESDIIGEKRVFSIRLGKFRNLN 250

Query: 331 NGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVI 390
           NGGLRGLEKGEGETSSSSL+ARRCYSMGSYQYIVA SELQVAL TSNRI GGSMRFVKVI
Sbjct: 251 NGGLRGLEKGEGETSSSSLNARRCYSMGSYQYIVAESELQVALHTSNRISGGSMRFVKVI 310

Query: 391 RDSQTGNCPID-GDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
           RDSQTGNCPID  DDDAE KKINIGSKNESFSVSKIWLWSKK+RQP  S
Sbjct: 311 RDSQTGNCPIDHDDDDAERKKINIGSKNESFSVSKIWLWSKKSRQPCSS 359

[Close]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL
Match: A0A6J1DCR2 (RING-H2 finger protein ATL47 OS=Momordica charantia OX=3673 GN=LOC111019155 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.8e-134
Identity = 253/294 (86.05%), Postives = 267/294 (90.82%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 210
           +V+ LVKQR S SS+SESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY
Sbjct: 66  LVRFLVKQR-SPSSISESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 125

Query: 211 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIH 270
            EIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID WLLSNSTCPLCRGTL  +
Sbjct: 126 TEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDTWLLSNSTCPLCRGTL--Y 185

Query: 271 SPGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNN 330
           SPGLAIENP++GFEDSE TE S EDGR G+PTAQK PE+D+ GEKRVFSIRLGKFRNLNN
Sbjct: 186 SPGLAIENPIFGFEDSEGTEGSAEDGRIGVPTAQKPPENDMYGEKRVFSIRLGKFRNLNN 245

Query: 331 GGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRFVKVIR 390
           GG+RGLEKGEGETSSSSL ARRCYSMGSYQYIVA S+LQVALRTSNR  G SMRFV+  R
Sbjct: 246 GGVRGLEKGEGETSSSSLGARRCYSMGSYQYIVADSDLQVALRTSNRTGGRSMRFVRA-R 305

Query: 391 DSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHVRAS 445
           DSQTGN  I  DDDAEGKKINIGSKNESFSVSKIWLWSKK RQP GSD H+RA+
Sbjct: 306 DSQTGNSLI--DDDAEGKKINIGSKNESFSVSKIWLWSKKARQPIGSDVHLRAN 353

[Close]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL
Match: A0A6J1FN91 (RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111447334 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 6.1e-130
Identity = 267/360 (74.17%), Postives = 288/360 (80.00%), Query Frame = 0


Query: 89  LSPINHPFPPSSSLFCFPFRCYNAIALTHRNRSATQGFSRNSLNHMPHAV----PAPFLV 148
           +SP   P  PSSSL       YN+    ++ +SA    S + ++     V       F +
Sbjct: 14  VSPSIAPLQPSSSL------AYNS---DYQKQSALPSSSSSKISPAVLLVIVILALLFFI 73

Query: 149 DFPMTQVVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDA 208
              +  +V+LLVKQRSS SS+ ESNSNRF EMS+SSAFQRQLQQLFHLHDSGLDQAFIDA
Sbjct: 74  SGLLHLLVRLLVKQRSSPSSIPESNSNRFLEMSDSSAFQRQLQQLFHLHDSGLDQAFIDA 133

Query: 209 LPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCR 268
           LPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLP+CSHAFHIDCID WLLSNSTCPLCR
Sbjct: 134 LPVFLYKEIVGLKEPFDCAVCLCEFSELDKLRLLPSCSHAFHIDCIDTWLLSNSTCPLCR 193

Query: 269 GTLHIHSPGLAIENPVYGFEDSEETEESTEDG-RFGIPTAQKAPESDIIGEKRVFSIRLG 328
           GTL  +SPGLAIENPVYGFEDSEETEESTEDG R  IPTAQKAPESDI GEKRVFSIRLG
Sbjct: 194 GTL--YSPGLAIENPVYGFEDSEETEESTEDGRRISIPTAQKAPESDINGEKRVFSIRLG 253

Query: 329 KFRNLN-NGGLRGLEKGEGET-SSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGG 388
           KFRNLN NGG+RGLEKGEGET SSSSL ARRCYSMGSYQYIVA SELQVAL TSN     
Sbjct: 254 KFRNLNSNGGVRGLEKGEGETSSSSSLGARRCYSMGSYQYIVADSELQVALSTSN----- 313

Query: 389 SMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGSDTHV 442
                  +RDSQTGNC +D DD+AEGKKI IGSKNESFSVSKIWLWSKK RQPSG+DTHV
Sbjct: 314 -------LRDSQTGNCSVD-DDNAEGKKIKIGSKNESFSVSKIWLWSKKGRQPSGADTHV 349

[Close]

BLAST of CcUC05G107480 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.9e-75
Identity = 165/285 (57.89%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 151 VVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLY 210
           +V+  +K++ S+ S S + SN+ PE S+S  +QRQLQQLFHLHDSGLDQA IDALPVFLY
Sbjct: 73  LVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLY 132

Query: 211 KEIVGLKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIH 270
           KEI G KEPFDCAVCLCEFSE DKLRLLP CSHAFHIDCID WLLSNSTCPLCRGTL   
Sbjct: 133 KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL--F 192

Query: 271 SPGLAIENPVYGFEDSEETEESTEDGRFGIPTA--QKAPESDIIGEKRVFSIRLGKFRN- 330
           S G   E P + F        + +DG  G+  +  QK  E++I   KRVFS+RLGKFR+ 
Sbjct: 193 SLGHQFEYPDFNFGFF-----AGDDGGGGVRVSPVQKPAENEI--GKRVFSVRLGKFRSS 252

Query: 331 --LNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNRICGGSMRF 390
             +NNG +  +  G GETSSSSL  RRC+SMGSYQYIVA S+L VAL  +N         
Sbjct: 253 NIVNNGEV--VVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPNNE-------- 312

Query: 391 VKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKK 431
                        +  + D EGKKIN+ SK ESFSVSKIW WS K
Sbjct: 313 ------------GLKNNKDVEGKKINMRSKGESFSVSKIWQWSNK 326

[Close]

BLAST of CcUC05G107480 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 7.2e-75
Identity = 171/318 (53.77%), Postives = 213/318 (66.98%), Query Frame = 0


Query: 142 FLVDFPMTQVVKLLVKQRSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAF 201
           F +   +  +V+ L+K  S+++S   S SNRFPE+S S A QRQLQQLFHL+DSGLDQAF
Sbjct: 56  FFISGLLHLLVRFLIKHPSATAS---SRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAF 115

Query: 202 IDALPVFLYKEIVG----------LKEPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCID 261
           IDALPVF YKEIVG           +EPFDCAVCLCEFSE DKLRLLP CSHAFH++CID
Sbjct: 116 IDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCID 175

Query: 262 AWLLSNSTCPLCRGTLHIHSPGLAIENPVYGFEDSEETEES-TEDGRFGIPTAQKAPE-S 321
            WL SNSTCPLCRGTL   SPG ++ENP++ F+D  E EE  TE+G      +QK  E  
Sbjct: 176 TWLQSNSTCPLCRGTL--FSPGFSMENPMFDFDDIREDEEGVTENG------SQKTMEIQ 235

Query: 322 DIIGEKRVFSIRLGKFRNLNN-GGLRGLE-KGEGETSSSSLSARRCYSMGSYQYIVAASE 381
           +I+ EK V  +RLGKF+ L+N G  +G +    GETSSS+L ARRC+SMGSYQYI+  SE
Sbjct: 236 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 295

Query: 382 LQVALRTSNRICGGSMRFVKVIRDS-QTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWL 441
           L+V    ++R+     R     ++S QTGN         + KKIN  +K ESFSVSKIWL
Sbjct: 296 LKVPF-ANDRL----PRLKPQDKESEQTGN-----SSSEDNKKINTVAKGESFSVSKIWL 352

Query: 442 WSKKTRQPSGSDTHVRAS 445
           W KK +  S +   + +S
Sbjct: 356 WPKKDKFSSDAQRRLPSS 352

[Close]

BLAST of CcUC05G107480 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-46
Identity = 131/318 (41.19%), Postives = 164/318 (51.57%), Query Frame = 0


Query: 165 MSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKE-PFDCA 224
           ++ S+ +R       +A Q QLQQLFHLHDSG+DQ+FID LPVF YK I+GLK  PFDCA
Sbjct: 76  LTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCA 135

Query: 225 VCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTLHIHSPGLAIENPVYGF 284
           VCLCEF   DKLRLLP CSHAFH+DCID WLLS+STCPLCR +L   S   + ++P   F
Sbjct: 136 VCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSL--LSDLSSHQDPRSSF 195

Query: 285 ---EDSEETEESTEDGRFGIPTAQKAPESDI--------------IGEKRV--------- 344
               +S     S E G      A  A   DI              +G  R+         
Sbjct: 196 LLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYL 255

Query: 345 -------------FSIRLGKFRNLNNGGLRGLEKGEGETSSSSLSARRCYSMGSYQYIV- 404
                        FS++LGKFRN++ G   G        +SSSL  RRC+SMGSY+YI+ 
Sbjct: 256 DGELGGSVGKVVPFSVKLGKFRNIDIG--EGTSSNNNIGNSSSLDERRCFSMGSYEYIMD 315

Query: 405 AASELQVALRT-----SNRICGGSMRFVKVIRDSQTGNCPIDGDDD----AEGKKINIGS 433
             + L+V + T      NR   G    +       TG     G        E  + N+  
Sbjct: 316 EETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNV-V 375

[Close]

BLAST of CcUC05G107480 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 176.0 bits (445), Expect = 6.6e-44
Identity = 119/300 (39.67%), Postives = 165/300 (55.00%), Query Frame = 0


Query: 165 MSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLK-EPFDCA 224
           ++ S  +R       +A Q QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 68  LTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 127

Query: 225 VCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTL--------HIHSPGLA 284
           VCLCEF   DKLRLLP CSHAFH++CID WLLS+STCPLCR  L        ++ S  L 
Sbjct: 128 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLL 187

Query: 285 I---------------ENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRV-FS 344
           +                N   G++ + ++E +    R G  +     + D + EK V   
Sbjct: 188 VLESEQSSRDMVPVLESNSQLGYDVNNDSESTRI--RSGRKSCDPDGDMDGLDEKVVPLE 247

Query: 345 IRLGKFRNLNNGGLRGLEKGEGETS--SSSLSARRCYSMGSYQYIVAASELQVALRTSNR 404
           ++LGKFRN+++ G  G ++ +   S  S ++  RRC SMGSY+YI+   E  + +  S +
Sbjct: 248 VKLGKFRNIDHVG-EGSDQKKNSISGNSKNVDGRRCLSMGSYEYIM-DQEATLKVHVSTK 307

Query: 405 ICGGSMRFVKVIRDSQTGNCPIDGDDDAEGKKINIGSKNESFSVSKIWLWSKKTRQPSGS 438
              G  R    +   +T       D   +G + ++  + ESFS+SKIWL  KK +Q   S
Sbjct: 308 KLSGKDR----VPSHRTVMSECGFDPTVKGIEKSV-VERESFSLSKIWLRGKKEKQKGTS 358

[Close]

BLAST of CcUC05G107480 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-39
Identity = 101/226 (44.69%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 159 RSSSSSMSESNSNRFPEMSESSAFQRQLQQLFHLHDSGLDQAFIDALPVFLYKEI-VGLK 218
           R SS+     + N  P++   S+   QLQ LF LHDSGLDQ  IDALPVFLY  + + L+
Sbjct: 145 RKSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLE 204

Query: 219 EPFDCAVCLCEFSELDKLRLLPTCSHAFHIDCIDAWLLSNSTCPLCRGTL------HIHS 278
           +PFDCAVCL EFS+ DKLRLLP CSHAFH+ CID WLLSNSTCPLCR +L      + HS
Sbjct: 205 QPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHS 264

Query: 279 PGLAIENPVYGFEDSEETEESTEDGRFGIPTAQKAPESDIIGEKRVFSIRLGKFRNLNNG 338
             L    P+ G        +  +DG+  +              KRVFS+RLG+F++ N  
Sbjct: 265 ETLVA--PLSG-------HQQVDDGKASL-------------AKRVFSVRLGRFKSTNES 324

Query: 339 GLRGLEKGEGETSSSSLSARRCYSMGSYQYIVAASELQVALRTSNR 378
                ++ + +        RRCYSMG+ QY+V   +  VAL +S R
Sbjct: 325 ---QSQRHDVKDEIGVRMPRRCYSMGTQQYLVCDQDFVVALSSSPR 343

The following BLAST results are available for this feature:

BLAST of CcUC05G107480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893199.1	3.5e-148	92.86	RING-H2 finger protein ATL46-like [Benincasa hispida]	[more]
KAA0034330.1	1.3e-147	80.00	RING-H2 finger protein ATL46 [Cucumis melo var. makuwa] >TYK15589.1 RING-H2 fing...	[more]
XP_004135477.1	1.4e-144	93.08	RING-H2 finger protein ATL46 [Cucumis sativus] >KGN51821.1 hypothetical protein ...	[more]
XP_008446237.1	4.0e-144	92.73	PREDICTED: RING-H2 finger protein ATL46 [Cucumis melo]	[more]
XP_022151161.1	3.8e-134	86.05	RING-H2 finger protein ATL47 [Momordica charantia] >XP_022151162.1 RING-H2 finge...	[more]

BLAST of CcUC05G107480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW38	2.7e-74	57.89	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9FL07	1.0e-73	53.77	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q940Q4	5.8e-45	41.19	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	9.3e-43	39.67	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q7X843	2.4e-38	44.69	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of CcUC05G107480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZH7	6.5e-148	80.00	RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KVN9	6.7e-145	93.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602200 P...	[more]
A0A1S3BE30	2.0e-144	92.73	RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103489027 PE=4 SV=1	[more]
A0A6J1DCR2	1.8e-134	86.05	RING-H2 finger protein ATL47 OS=Momordica charantia OX=3673 GN=LOC111019155 PE=4...	[more]
A0A6J1FN91	6.1e-130	74.17	RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111447334 ...	[more]

BLAST of CcUC05G107480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23980.1	1.9e-75	57.89	RING/U-box superfamily protein	[more]
AT5G40250.1	7.2e-75	53.77	RING/U-box superfamily protein	[more]
AT4G30400.1	4.1e-46	41.19	RING/U-box superfamily protein	[more]
AT2G18650.1	6.6e-44	39.67	RING/U-box superfamily protein	[more]
AT3G48030.1	1.7e-39	44.69	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 222..263 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 221..264 e-value: 3.7E-12 score: 46.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 222..264 score: 12.223724
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 181..269 e-value: 1.2E-19 score: 71.8
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 151..439
None	No IPR available	PANTHER	PTHR45768:SF54	RING-H2 FINGER PROTEIN ATL47-RELATED	coord: 151..439
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 221..264 e-value: 1.50701E-18 score: 76.9569
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 201..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G107480.1	CcUC05G107480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding