CcUC05G106610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G106610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr05: 33742895 .. 33745911 (-)
RNA-Seq Expression	CcUC05G106610
Synteny	CcUC05G106610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGGTTATACATTTTGTGCCTATGTAAGTTAAACAGTGTCCTGGTGGGAGGTCACTTGAGGTCCTGATGCTATTGCAAATTGCAGCCCCCTGTGCCGTCCTGATTGTAGCACAAAAGCAACTTGTGCTGCACCCAAGGCTGCAGCCTCCCGTTCCTCAAATTAGGCAAAACATAAAAAGGAAAAAGTAACATTTACTACAAAAATTTATCCTTGAGTTAATAAGTTGACAGTAATTTGGGAGATAATATGCACCTGTCGTCGTTGTCGACGTTGCAAGATGTTGACTGCACAAGCCATAATGTAACAGGGCAAGAGAAAACCAGCTGCTCGAAGCAAGAAAATCTGAATGGTACGGTTAAAAACAATGTCCACAAGATGAGAAATGTCAGGAAAACTGCAGGAGATTGTTGTCCATTCCAGATTCAAACAATGAACTCGAACTTACAGAGAAGAAAGCAGACAAGTAATCGTCGCCATCAGGATCTGTGACTTCAAGTGCATGACGTAAGAAAAGTAGGATCATGAGCTGCGATATTGAAATCAAGAAAACGATTTATCCCAATTGAATGGAAAAACATCAGCAAACAGGCTCTTTAATTGATTTATTTTCTTTGAGAATATGAAATTGCAATGCCAATTTTGTAAGAGAGTAATTCGAAGACAAGTATGAAAAAACCTTCAAATGTGACGTATTAGCGCACTGGTGTATTGATATTGACATGACTTTGTGGAGAGTGTATGATAATAGTACGTTTCTTGTTTATTCTACTGAGAATTCTTATGTGCGGTATCAAGCAAGAAACTTACAATAAGAGCAGCTGCTCGGCAAAATGCAGCTCCACTGGCCTCGGAAGCAGCATATTCATCATACTCAGCTTCCAATAAATTATGTTCAGCCTCTGCAATAGCCAAGAGGCGAGGATCGTGTAAATTCAAAGGGGTGCCAGTGATGGTCCACCCTCCCCTGCAGAAAAAAGAATCCAAACAAAGAATAGGACATGTTTAGCTTAATATCTCAAATGCAAAATATCGGAAAGCTTACCACAATTTTTTCAGTAAACAAAAAATTTCATAAGGTACCCGATGTCAATGGATGTTTCTTCAATGCGAGGGGGAGGTGGTGGAGCTGTATAACCAGGTTGGTAAGGCTGTTCATCATATGCAAGCGTATAAAATCAGATAAGTTGAAACCTCTAAAACCATAACATTCAAAGTAGCTGAATTGTTTCCATATACATATGCGTCTACACTCATCATTTAAATTATTTTATCTTTTAATGGTCAACTTGTAGCATTTCTTGACTTCATTTTTTAATGTAAATATCATTAAGTAAAACATGTTTTTCTTTCAACCAAAACAAGCCAAGATGCTTTCACCAGATAGTGAATATTGAATGGAGTAACATGCGTCCACATAACAAGTTGAATGCACGTGCACACACTCATATAAATATATTGATAAGAACCTAGCTTTCATGAGAAAATATGAAAGAATAAATAAGAGCAATACAAAAACGACGACCCAACAAAGGGAGTTCATTCAAAGCTAGGGACTCCGGTCCAAAAGAATCAATCAAGCTAATAACTGCACAAAGCCTCAGAAGTAGAAGCCGCAACGAAGCATCCAATCTAACACTATCGAGCACCTCAAACCAAGGTCAATTGACATTTCTAAAAATTCTACTATTTCTTTCAACCCAAACACCCTACACCACAGCGAAGCAACAAGTTTGCCGAAGAACCCTGGCTTTATCCCAAAAAGAGGGACAAGTGCAACAACATCTCTTCTAGCATAACTTTGATGTCAAATGCGCATATGATTCCAAGAACTTAAAATACCCAAGTAAAATCAAGAATGTGAACTTACCTGATGACAAATCTCGCAAATTATATCCCCTTTCTCATTGCACCAAAGCTGTATACACTTCCGATGAGCATACTGAGAAAGCAACCATTGTTAACATCTCATCTAAATCGTATTGCAACACAAGCAATAAATGTGTCATTAGATATATTTGAGATAAACAAATCAGGAGAAATATAAACAGGCATTTTACCATAAAATAGAACATTCCTATCAAACTTCCTCAGATTTATGGCATACATTAAACAACTGGTTTCCGTAAATTTTCACATCATCACCAACTTAATTAGCCAACCACGATGGCTAATGACTGCAATTTGAACTACAAAAAACAACTGAGCTGCTAACCTTATGACATATATCAAGCTCAATAACCCCTATATATTTGTACTTCAAATTACTTGTTGATAACTATGCAATCCGATAGGAACTATATCATTTGCGATTTGCAACGAACCCTAGAGCCGAAACATTTAGCAGTGACACAAATTTACAAAGAAACTATAAAGTTTTACAATACTTAATTGATCAATCATCTGTACCTTAAGACTGCCACTACAGGCACATGGAGTTTCCAGCTTCCTAATTACATCCTCATCCTGACAAATGCGACACTCCGCTGTCTGAATCAATGAATCATCCTCTCCATCCAAACCCTCATTTTCTTGTGCTCTCTCATCAACATTGGAAGTGGAGGTTGTTGAAGAAGATAAACCCACCGAGTCGGTCTCCAAATCCCCACCAACCGGCAAGAGAGGAACAACCTCAGTCGGATTGGGGACGGAATCAACGGTTTGCGGCCGAATTAATCGGTCCACATACAGAACGAGATGATCGCTCATAGCTTCTCAAACGGAAATGAAAGACCTAAGTGGGCAAAAACAAACCACATAGGCTACAGGAATTCAGAAGAAAAAGGAAAAAACTGACTCAAAGAAGAAGAAAACAGGGGCGTACTAGTAGTAATCGGAGAAGAACCAGAATCCCCAGTGATCGCGCTGAGAAGGCAGCGGACCGGTGGGATTCCGGAGCAGAGTTGAAGAGAAGAGGAAGACAAATGAGGGATTTAATCGTATGGAAGTGGGTTCGATCAAATTGGGGAAAAATCCAAGAATATACGTGTGGTAATGCAATGAAATCGGGTTAG

mRNA sequence

ATGAAGAGTAATTTGGGAGATAATATGCACCTGTCGTCGTTGTCGACGTTGCAAGATGTTGACTGCACAAGCCATAATGTAACAGGGCAAGAGAAAACCAGCTGCTCGAAGCAAGAAAATCTGAATGGTACGGTTAAAAACAATGTCCACAAGATGAGAAATGTCAGGAAAACTGCAGGAGATTGTTGTCCATTCCAGATTCAAACAATGAACTCGAACTTACAGAGAAGAAAGCAGACAATGGAGGTTGTTGAAGAAGATAAACCCACCGAGTCGGTCTCCAAATCCCCACCAACCGGCAAGAGAGGAACAACCTCAGTCGGATTGGGGACGGAATCAACGGGGCGTACTAGTAGTAATCGGAGAAGAACCAGAATCCCCAGTGATCGCGCTGAGAAGGCAGCGGACCGGTGGGATTCCGGAGCAGAGTTGAAGAGAAGAGGAAGACAAATGAGGGATTTAATCGTATGGAAGTGGGTTCGATCAAATTGGGGAAAAATCCAAGAATATACGTGTGGTAATGCAATGAAATCGGGTTAG

Coding sequence (CDS)

ATGAAGAGTAATTTGGGAGATAATATGCACCTGTCGTCGTTGTCGACGTTGCAAGATGTTGACTGCACAAGCCATAATGTAACAGGGCAAGAGAAAACCAGCTGCTCGAAGCAAGAAAATCTGAATGGTACGGTTAAAAACAATGTCCACAAGATGAGAAATGTCAGGAAAACTGCAGGAGATTGTTGTCCATTCCAGATTCAAACAATGAACTCGAACTTACAGAGAAGAAAGCAGACAATGGAGGTTGTTGAAGAAGATAAACCCACCGAGTCGGTCTCCAAATCCCCACCAACCGGCAAGAGAGGAACAACCTCAGTCGGATTGGGGACGGAATCAACGGGGCGTACTAGTAGTAATCGGAGAAGAACCAGAATCCCCAGTGATCGCGCTGAGAAGGCAGCGGACCGGTGGGATTCCGGAGCAGAGTTGAAGAGAAGAGGAAGACAAATGAGGGATTTAATCGTATGGAAGTGGGTTCGATCAAATTGGGGAAAAATCCAAGAATATACGTGTGGTAATGCAATGAAATCGGGTTAG

Protein sequence

MKSNLGDNMHLSSLSTLQDVDCTSHNVTGQEKTSCSKQENLNGTVKNNVHKMRNVRKTAGDCCPFQIQTMNSNLQRRKQTMEVVEEDKPTESVSKSPPTGKRGTTSVGLGTESTGRTSSNRRRTRIPSDRAEKAADRWDSGAELKRRGRQMRDLIVWKWVRSNWGKIQEYTCGNAMKSG

Homology

The following BLAST results are available for this feature:

BLAST of CcUC05G106610 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G106610 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G106610 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC05G106610 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G106610.1	CcUC05G106610.1	mRNA