CcUC05G105940 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G105940
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosome maturation factor RimP
Location	CicolChr05: 33322680 .. 33327727 (-)
RNA-Seq Expression	CcUC05G105940
Synteny	CcUC05G105940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGATGGGTCAACCGCAGGGTTTATATAGGGTTTAGAGCAACCGTCGACAACCCGCGAAATATCCATTCTGCGAGCTTCCATCGATCAACCGTCGAGGCAAAACAATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGGCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTATTCCTCCCGTCGCGACTACGCATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCTCAGTGTACGGATGCGTTTTCTTATTCTTGTGCAATCCGTCAAATTTCTCTTATTTTGACGCTTCAATCGAGATTACCGTTTGGGATATGATTAATTAATGGCTCTGCGTAGTTTTTTGCTGCAGATGGTGCTTTCTGTTTAGTGGAATATCTTACTAAGAGTGTGGTGTGATTCAGTCATGTTCAGTTGTTTTGATTGTTGAACTGCTTATCTAGTGTATTATGTTTCCTCGAGCTTTTTGTTCCTTTACTTATCCATGCAGTTCTAATGCTTGAAAAGCTTTATGATTACAATATTATATGACTAGTTGCTTTCAGTGTCGATAACCGGTGATTGTTGTAGTGTTATTTGTAAAATTTTTAGTGGGTGTTTGAGGTGCTGAGTTGGTTATTATAGTTTGTAGGTTATAATAGTATTTTTTGGGGTGTAGATTATTGTAGTCTGTGTTTGGGTGGTGCAAACTATTTTGGTTTGACAAAGAAGGAAAAAAATAATGACTAGGAAATTGTAAACACTATAGCAAATAGGGATATGAAATAGTAATTATGTTGTTAATTGTAAGTTACAATAGTTGAAAACACCTATTGGTGTAATTGGTGTCCCAAACATGTAGCCCACTCCATGAACTTCGAGTTGGTGGGCCAAACACCCTTAAGTGTAAAATGATAATGGTGTACTATAGATTTGATGCATAAGGTCCCCTTCGCTTCAGTCTATGAAGTTTTCCCCATTCTAATGATGATATTAGTGTGTAAAATGATAATGGTGTACTATAGATTTGATGCATAAGGTCCCCTTCGCTTCAGTCTATGAAGTTTTCCCCATTCTAATGATGATATTAGTGTGTTCGTTGCTAGTTGTACATTTGTCCAGCTATTTTTTACTCTCTTACAGCCACTATTGGCTATTGGAATTTCTAATTGAAGACTTGTTTAAGCAATGCCTAAAGCTTGAGGCCTCAATCTTGGAAATCTCTGAACTTTTGTAGATGGGAGGGATGAATGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGGTAATTCCATCTACTGAACTGAGCTTTTTATTTCACTATTATTATAGCCATAGGTGATGCTAATTGTTGATAACATAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAGTAATTTTCTTCTTTTTGTTCATATTTTTCTCACATAAGAGCTATGCGTTCTATCTTCTGAGTACTGGGGAATTTGATTTGCAGTCGCATTTTAAGCGCTTTTTGCTTGTGGGAGAGATTAGCAATCAACTCAACCTTGTCTTCTAATAACAGAAGAACAAGAATAATGATCTCAAACTCAACTGTCTCCAAACTTTTTAAATTTTGTTTCAACCTTTCTCTTTGTCACCATGAATTTGGCTGACTCTGACGGTTGTGTTATCCCCAACTAGTTAATATTGAAAATTTCTATTCTTTGCTAAGAATCTGTTTTTTTTTGTTTGAGTTATATATTTGTTTTTGGATAGGAAATCTGTAGTCATGTATTTGTGATGATAGTATAACCATGAAAACAAACTGAGGTGGGCATTCCGTCAGTTTGGATTTCATAATTAAGAATTACAGGCTGCTTTAACTTGGATTTATGAATTTACAATTTGTAAAATATTATTCTCTTCTTAGATTTGGTTGTCCCGGCTTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTAATAGCTGATAGACTTTGCTATCCATCCCTACTGTACAAAAATGATTACTTAGTGGTTAGTGCACACTTATGGTTGCATACATTAAACCTTAACAATCATGCTTCTGCTGAAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACACTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAGAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATGCTGAATGTCAGCACCTGAAGGTCCAAAAGAGAGCATGGGTGTCCTTAATTCAGGAGGTTAGTTTTAGTTTTACGTGGCATTATTTCTATTTGAGGTCTTGGAGCTTTTCCAATTGGACACTTTCTTCTGTTTGGAAAAGCTGTCTGTAACTCAAGCATTATTTTCTAATAGGATATTTTTCTTCTTTTGGAATTGATATCTTTGTAAGGACTTGGTATATTTGGTATATCTTCCAGCTCTGCTTATGTCAGCTCTTCAACTGATATTTCTTTTCTCAACTATATTGAACTTCAAAGTTGTTACTTTTTCCCCTAATCTAATTCGTTTTCACGACCTAAGTGGTGTTTTCTTTTAGATATATATTCTCTTTCATTTACTAGGTCCCCCCTCCCCCTTCTCACTGCTCTTCTGGCGTAATCTTTTAATACTTGCTCTTAATCTTGGGCTTCTCTTTTGGTATTGCCTTTCCCTTTCTTTTCTCAACTATATTGAACTTCAAAGTTGGTATTGCCTTTCTCTTTCTACTCTATTGGTTAAAGTTCTGTAAATCAGAGGAAGTGTCTTTTTCACCCTTTCCCAGTCCTTTATATAAGCATTTTCCCTTTATCCATTTATTCTGTGATAATCTCATTATCTAAGTTGCATGCGCATTAGTTGTTGTGAAAGCCTTGAAGATTTTTCCTTTATCGCATTATATGGTAAGAATATTCTTGCATGGTACACCCAGCAGGATTTTAACTTTAAAATAAAAATAAAGTGCAGATATATGGCTGTCTTACACGTTGATTAAACAAAGAGCTGATTGAGTAAGATTCCTGAAGTTAGGTGGTCATGGGAACAAAATCGGTTGACTTCGTATTATACGCATTTGGTTTGCTGACGTTAAAATCTTGAAAAAAGAGTGAGGCATTGCCCTTCATGGACTGAGGAAAGGAATTGTACTCTCTCACTATGTGTGTGTGTGTGTCTCAGGGAGCTTGTTATTGATTTGATTCTTTCTATAAGAATGTTGAAGTAAAACTATTTGAATAAAACCATCATGGGTTGGCTTAGTGATAGTGAGAATATTTTAAAAAGGCCATGGGTTATGGGTTCAATCTATGATGGCCACCTACCTAGGATTTAATATCCTACGGGTTTCCTTGACACCCAAATGTTGTAGGAGCAGGAGGCTATCCTGTGAGATTAGTCGAGGTGCGTGTAAGCTGGTCCGAATACTCACGGATATAAAAAAAAAAAACAAACTATTTGAATAATATTCACAAGAATGATATTGTTTATTTTAGAGTAACATTTAGAGCGATGTCATTTTGAATCTACCACATCAAAGAAGTATAATAATGACAACATTACTATTCCTAGAAGAATAATACTTTGCTGAAAGATACTAGAAAGCTTGCGCATATTTTTTTAGTATGATTCAATATTAAATATATAGCTTTTTCCTCCTATCCTTGACCCAATAGAAATAAACATATCAAAGACTAAGTAAAATTTCTTATTAACTTATGTGTAACAAAAAATTTCTTCTCTTCTACTAGAACTACATTCATCCATGCATATTACACAATAGAACCATAAGAGCTGACGGTCTTTTGGAGGACATCCAACTGAGCCACAGTAATCTTATCATCCATCACGGCTGGAGGGTCAGTTAACAAATTACTAACTTGGCACGTATTGTTTGTCAGACTCGTAGAACGAGCCAACGAGGAGTACTTTTCTCCTCGTGGAGGAGGGGATTTTAAGGAGGGACAGGTTAATAATGGAGGAAACTGTTTGATGTGTGATTTTTTCCTAAATGGTTATAGATCCTACGAGTAATTTGTATATTAATGAAACTCATCTGAATGGTTTAGTTGCTTTTGGGTAGTGAAATGTCCACCACAAGGTCTTGTGCTTCTCCTGTGTGTGTATGTGTGTGTGTATATATATATTTTTCCTTCTTTCTTTTTCAGCCCGTCTCCGTCAGCAGTAAAGTATTTTGTGGGTGTTAGCTCTCTAATTCCTCTTTCTAAATTTGTCTCAGTTTTTTTTTTGTTCTCTCTGACTCAACCTCATCTCTTTTGTTTGTTCATAGCTAACTACCACAAATTAATAAAGTTTTAGCAGTACTTTATTTTTCAATATTTGATAATTACAAATAACGTGGCATCATATAATCTATCTATGATATTATTTTTCTCACAGGTCTGTTGACATCAATATTTCCATCATGAATATATAAACTCTACATTTTATCTATGATAACAGGCACATTCAACAAAGGTAGAGCCAAGATACTTATTGTCAATCAAAAGGAGGTGGATGTTGCCATGTTGGGCAGGCCCCCCGGCTGTAGAGATAGATAG

mRNA sequence

AAAAAAAAAAAGATGGGTCAACCGCAGGGTTTATATAGGGTTTAGAGCAACCGTCGACAACCCGCGAAATATCCATTCTGCGAGCTTCCATCGATCAACCGTCGAGGCAAAACAATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGGCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTATTCCTCCCGTCGCGACTACGCATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCTCAGTATGGGAGGGATGAATGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACACTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAGAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCCACCTGAAGGTCCAAAAGAGAGCATGGGTGTCCTTAATTCAGGAGGCACATTCAACAAAGGTAGAGCCAAGATACTTATTGTCAATCAAAAGGAGGTGGATGTTGCCATGTTGGGCAGGCCCCCCGGCTGTAGAGATAGATAG

Coding sequence (CDS)

ATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGGCTGTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTATTCCTCCCGTCGCGACTACGCATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCTCAGTATGGGAGGGATGAATGGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTTTGCAAGGCGTACCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATACATTTATGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTTCCTACACTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATTTGGAAATTGGCAAATGTGAGGGAGAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCCACCTGAAGGTCCAAAAGAGAGCATGGGTGTCCTTAATTCAGGAGGCACATTCAACAAAGGTAGAGCCAAGATACTTATTGTCAATCAAAAGGAGGTGGATGTTGCCATGTTGGGCAGGCCCCCCGGCTGTAGAGATAGATAG

Protein sequence

MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEEDDDLEPELGDGGGGGGVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTPPEGPKESMGVLNSGGTFNKGRAKILIVNQKEVDVAMLGRPPGCRDR

Homology

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BLAST of CcUC05G105940 vs. NCBI nr
Match: XP_038891543.1 (uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 uncharacterized protein LOC120080930 [Benincasa hispida])

HSP 1 Score: 493.4 bits (1269), Expect = 1.5e-135
Identity = 252/278 (90.65%), Postives = 258/278 (92.81%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN IAHTLLHRARIA+VSSSLSS+GAPSSI   SEATSSQSACS SSRRD+AFAF PA
Sbjct: 1   MRGNWIAHTLLHRARIAAVSSSLSSIGAPSSIVFASEATSSQSACSSSSRRDHAFAFPPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEEDDDLEPELGDGGGGGGVVLQ 120
           ATLRLFNTNSSKDFQDE KEHNP QYG DE GETTDGWEEDDDLEPELGDGGGGGGVVLQ
Sbjct: 61  ATLRLFNTNSSKDFQDEGKEHNPLQYGGDEGGETTDGWEEDDDLEPELGDGGGGGGVVLQ 120

Query: 121 GVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQ 180
           GVPWGE VLLLAQEVL QFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCP LEELESYSQ
Sbjct: 121 GVPWGERVLLLAQEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEELESYSQ 180

Query: 181 EYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTE 240
           EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKA+PMRVSY E+VD RGTE
Sbjct: 181 EYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAIPMRVSYIEEVDSRGTE 240

Query: 241 NDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           NDGV+MLD VE E E CIWKLANVRENRDPLSKGRPLT
Sbjct: 241 NDGVYMLDRVESEYECCIWKLANVRENRDPLSKGRPLT 278

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BLAST of CcUC05G105940 vs. NCBI nr
Match: XP_008446450.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X1 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 9.2e-130
Identity = 249/314 (79.30%), Postives = 269/314 (85.67%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT--PPEGPKESMGVLNSGGTFN 300
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT    E   +     +   T N
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKDTLN 300

Query: 301 KGRAKILIVNQKEV 312
           KGRAKILI+NQKEV
Sbjct: 301 KGRAKILIINQKEV 314

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BLAST of CcUC05G105940 vs. NCBI nr
Match: XP_008446452.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X2 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-124
Identity = 233/279 (83.51%), Postives = 250/279 (89.61%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279

[Close]

BLAST of CcUC05G105940 vs. NCBI nr
Match: XP_008446453.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_016900168.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-124
Identity = 233/279 (83.51%), Postives = 250/279 (89.61%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279

[Close]

BLAST of CcUC05G105940 vs. NCBI nr
Match: KAG7013097.1 (rimP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.6 bits (1163), Expect = 2.9e-123
Identity = 231/283 (81.63%), Postives = 248/283 (87.63%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSS-----RRDYAF 60
           M G+RIA TLLHRAR  +  SS SS G PSSI  G++A SSQS+CS SS     RR++AF
Sbjct: 1   MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAF 60

Query: 61  AFSPAATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEEDDDLEPELGDGGGGG 120
           AFSP+ T+RLFNTN SK+F+DEVKEHNP QYGRDE  ETTDGWEEDDDLEPELGDGGGGG
Sbjct: 61  AFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120

Query: 121 GVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEEL 180
           GVVLQGVPWGE VL LA EVL QFGDDI LYSFKTT RGYIYVRLDKLSNE+GCP LEEL
Sbjct: 121 GVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEEL 180

Query: 181 ESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVD 240
           ESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKAMPMRV Y ED +
Sbjct: 181 ESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGE 240

Query: 241 LRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
            RGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPLT
Sbjct: 241 SRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLT 283

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BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot
Match: Q72NX1 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rimP PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 143 IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-D 202
           +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTENDGVF 246
              +VSS GAER L +P DL RF+ +P+R+ +  +   +  E +G+F
Sbjct: 80  YTLKVSSAGAERKLNLPGDLDRFRGIPIRLVFRSEESEK--EQEGIF 119

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BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot
Match: Q8F7K3 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=rimP PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.2e-08
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 143 IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-D 202
           +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTENDGVF 246
              +VSS GAER L +P DL RF+ +P+R+ +  +   +  E +G+F
Sbjct: 80  YTLKVSSAGAERKLNLPGDLDRFRGIPIRLVFRSEESEK--EQEGIF 119

[Close]

BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot
Match: Q04U33 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rimP PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.1e-08
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 143 IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-D 202
           +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTENDGVFML 248
              +VSS GAER L +P+D+ RF+ +P+R+ +      +  E  G+F +
Sbjct: 80  FTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQE--GIFRI 121

[Close]

BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot
Match: Q04ZJ3 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=rimP PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.1e-08
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 143 IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-D 202
           +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGTENDGVFML 248
              +VSS GAER L +P+D+ RF+ +P+R+ +      +  E  G+F +
Sbjct: 80  FTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQE--GIFRI 121

[Close]

BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 32/97 (32.99%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 135 VLRQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGA 194
           +LR     + L+S +   R     I + LD L+++ G   LE+ E+ S+  K+ LD+ G 
Sbjct: 12  ILRVLAPPLALFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCETVSRRLKEELDQWGE 71

Query: 195 LGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRV 229
                 D   +VSS GAER+L++P+DL RF+ + +++
Sbjct: 72  ----EFDFTLQVSSAGAERVLRLPEDLIRFQGLLVKL 104

[Close]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL
Match: A0A1S3BEL4 (uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.5e-130
Identity = 249/314 (79.30%), Postives = 269/314 (85.67%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT--PPEGPKESMGVLNSGGTFN 300
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT    E   +     +   T N
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKDTLN 300

Query: 301 KGRAKILIVNQKEV 312
           KGRAKILI+NQKEV
Sbjct: 301 KGRAKILIINQKEV 314

[Close]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL
Match: A0A1S3BF38 (uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 233/279 (83.51%), Postives = 250/279 (89.61%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279

[Close]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL
Match: A0A1S3BF35 (uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 233/279 (83.51%), Postives = 250/279 (89.61%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           MRGN+IA TLL R+RI +VSS LSS+GAPSS    SEAT  Q+ CS  S RD+AF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
            TLRLF+T+SSKDF+DEVKE NP QYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS++FGCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSY EDVD RG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279

[Close]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL
Match: A0A6J1FZQ6 (uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC111449365 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 231/283 (81.63%), Postives = 248/283 (87.63%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSS-----RRDYAF 60
           M G+RIA TLLHRAR  +  SS SS G PSSI  G++A SSQS+CS SS     RR++AF
Sbjct: 1   MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAF 60

Query: 61  AFSPAATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEEDDDLEPELGDGGGGG 120
           AFSP+ T+RLFNTN SK+F+DEVKEHNP QYGRDE  ETTDGWEEDDDLEPELGDGGGGG
Sbjct: 61  AFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120

Query: 121 GVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEEL 180
           GVVLQGVPWGE VL LA EVL QFGDDI LYSFKTT RGYIYVRLDKLSNE+GCP LEEL
Sbjct: 121 GVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEEL 180

Query: 181 ESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVD 240
           ESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKAMPMRV Y ED +
Sbjct: 181 ESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGE 240

Query: 241 LRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
            RGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPLT
Sbjct: 241 SRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLT 283

[Close]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL
Match: A0A0A0KW71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606760 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 5.0e-121
Identity = 230/279 (82.44%), Postives = 245/279 (87.81%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIGCGSEATSSQSACSYSSRRDYAFAFSPA 60
           M  N+IAHTLL R+ IA+VSS LSS+GAPSS    SE T SQ+ CS  S R +AF FS  
Sbjct: 17  MLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFS-- 76

Query: 61  ATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWEE-DDDLEPELGDGGGGGGVVL 120
             LRLFNTNSSK F+DEVKE NPPQYGR++ GETTDGWEE DDDLEPELGDGG GGGVVL
Sbjct: 77  --LRLFNTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 136

Query: 121 QGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVL QFGDDIKLYSFK TPRGYIYVRLDKLS+EFGCP LEEL+SYS
Sbjct: 137 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYS 196

Query: 181 QEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVDLRGT 240
           +EYKKRLDETGALGNIPDDLA EVSSPGAERLLK+PDDL RFKA PMRVSY EDVD RG+
Sbjct: 197 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKIPDDLLRFKATPMRVSYIEDVDSRGS 256

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
           ENDGVFMLDH+ELESESCIWKLANVRENRDPLSKGRPLT
Sbjct: 257 ENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLT 291

[Close]

BLAST of CcUC05G105940 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 248.4 bits (633), Expect = 7.7e-66
Identity = 124/223 (55.61%), Postives = 165/223 (73.99%), Query Frame = 0


Query: 58  SPAATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWE--EDDDLEPELGDGGGGG 117
           SP+ + R   T  S   +++  E     Y   +  E  + WE  ED+D+E +LGDGG GG
Sbjct: 65  SPSPSARPPKTAGSNGDEEDTFE-----YKATDDVEVIEDWEEDEDEDVESQLGDGGDGG 124

Query: 118 GVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEEL 177
           G+VL+GV WGE VL +A +VL+Q   D++L++FKT+PRGYIYVRLDKLS E+GCP ++EL
Sbjct: 125 GIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDEL 184

Query: 178 ESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYTEDVD 237
           E +S+E+KKRLD+ GA   IP+DLA EVSSPGAERLL+VP+DL RFK MPM VSY E+ +
Sbjct: 185 EEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMTVSYVEETN 244

Query: 238 LRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLT 279
            R     GVF+L+ ++ ES++C+WKLA+VRENRDP SKGRPL+
Sbjct: 245 SRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLS 282

[Close]

BLAST of CcUC05G105940 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 89/206 (43.20%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 76  DEVKEHNPPQYGRDEWGETTDGWEEDDDLEPEL--GDGGGGGGVVLQGVPWGEHVLLLAQ 135
           +E++E+       DE+ E  D   E D+ E EL  GDGGGGGG+ L G  W +  L LA 
Sbjct: 97  EEIQENQDELLLDDEYDEDDDDDFEFDESEEELYAGDGGGGGGIKLAGTLWDKVALALAV 156

Query: 136 EVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALG 195
           +V   F  D+ +Y+FKT P   I VR+++L+N+FG P +E++E++S  Y+ +L E     
Sbjct: 157 KVCESFDGDLGIYAFKTLPNSTIQVRIERLTNKFGSPTMEDIEAFSTIYRAKLAEAELAK 216

Query: 196 NIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYT-EDVDLRGTENDGVFMLDHVEL 255
           +IPD+++ EVSSPG ER++++P DL R+K  PM V YT ED +   TE DG+F L   ++
Sbjct: 217 SIPDNISLEVSSPGVERVVRIPQDLDRYKDRPMYVRYTNEDTE---TEGDGIFRLVSFDV 276

Query: 256 ESESCIWKLANVRENRDPLSKGRPLT 279
           E++ CIW +A++R NR+   KGRPL+
Sbjct: 277 EAKICIWGIADIRVNREKAGKGRPLS 299

[Close]

BLAST of CcUC05G105940 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 146.7 bits (369), Expect = 3.1e-35
Identity = 76/148 (51.35%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 58  SPAATLRLFNTNSSKDFQDEVKEHNPPQYGRDEWGETTDGWE--EDDDLEPELGDGGGGG 117
           SP+ + R   T  S   +++  E     Y   +  E  + WE  ED+D+E +LGDGG GG
Sbjct: 65  SPSPSARPPKTAGSNGDEEDTFE-----YKATDDVEVIEDWEEDEDEDVESQLGDGGDGG 124

Query: 118 GVVLQGVPWGEHVLLLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEEL 177
           G+VL+GV WGE VL +A +VL+Q   D++L++FKT+PRGYIYVRLDKLS E+GCP ++EL
Sbjct: 125 GIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDEL 184

Query: 178 ESYSQEYKKRLDETGALGNIPDDLAFEV 204
           E +S+E+KKRLD+ GA   IP+DLA EV
Sbjct: 185 EEFSREFKKRLDDAGAEKVIPEDLALEV 207

The following BLAST results are available for this feature:

BLAST of CcUC05G105940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891543.1	1.5e-135	90.65	uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 unchara...	[more]
XP_008446450.1	9.2e-130	79.30	PREDICTED: uncharacterized protein LOC103489189 isoform X1 [Cucumis melo]	[more]
XP_008446452.1	4.4e-124	83.51	PREDICTED: uncharacterized protein LOC103489189 isoform X2 [Cucumis melo]	[more]
XP_008446453.1	4.4e-124	83.51	PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_01...	[more]
KAG7013097.1	2.9e-123	81.63	rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC05G105940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q72NX1	3.2e-08	36.45	Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemor...	[more]
Q8F7K3	3.2e-08	36.45	Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemor...	[more]
Q04U33	7.1e-08	34.86	Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovi...	[more]
Q04ZJ3	7.1e-08	34.86	Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovi...	[more]
B0SH16	1.6e-07	32.99	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]

BLAST of CcUC05G105940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEL4	4.5e-130	79.30	uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BF38	2.1e-124	83.51	uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BF35	2.1e-124	83.51	uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FZQ6	1.4e-123	81.63	uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC1114493...	[more]
A0A0A0KW71	5.0e-121	82.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606760 PE=3 SV=1	[more]

BLAST of CcUC05G105940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69210.1	7.7e-66	55.61	Uncharacterised protein family UPF0090	[more]
AT1G77122.1	1.2e-42	43.20	Uncharacterised protein family UPF0090	[more]
AT1G69210.2	3.1e-35	51.35	Uncharacterised protein family UPF0090	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..108
None	No IPR available	PANTHER	PTHR34544	OSJNBA0006B20.18 PROTEIN	coord: 17..278
None	No IPR available	PANTHER	PTHR34544:SF3	OS01G0594650 PROTEIN	coord: 17..278
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..34 score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G105940.1	CcUC05G105940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis