CcUC05G095470 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTATCAATCTCTTACTCTTCTTGCTCTTACGATCGCCGCTGTCGTCGGTACTATTGCTCAGGCTCCTTCTACCTCCCCCATGACCTCCCCAGCTCCAGTGCCCTCTTCATTTGATTCCACCTCTTCTCCGACGAGCTCACCAGATTCAGCAACGGTTTCCGCAAGCTCGCCAGGTTCATCTACCTTATCTCCATCTTTACTCGATGGAACTCCCACCACCTCGCCCGATGTCTCTGCCTATGCTCCGTCAATCTCTGTGGCTCCTGCATTCATGCCGGATTCCCCCAATTTCCACGCTCAGTCACCAACGACCGAGACAGCTCCAATTAGTTCTCCTCCTGCTGAGACTTCTCGCTTGTTTACAAATGGTTTTCTTGGCCGATAG ATGGCCTATCAATCTCTTACTCTTCTTGCTCTTACGATCGCCGCTGTCGTCGGTACTATTGCTCAGGCTCCTTCTACCTCCCCCATGACCTCCCCAGCTCCAGTGCCCTCTTCATTTGATTCCACCTCTTCTCCGACGAGCTCACCAGATTCAGCAACGGTTTCCGCAAGCTCGCCAGGTTCATCTACCTTATCTCCATCTTTACTCGATGGAACTCCCACCACCTCGCCCGATGTCTCTGCCTATGCTCCGTCAATCTCTGTGGCTCCTGCATTCATGCCGGATTCCCCCAATTTCCACGCTCAGTCACCAACGACCGAGACAGCTCCAATTAGTTCTCCTCCTGCTGAGACTTCTCGCTTGTTTACAAATGGTTTTCTTGGCCGATAG ATGGCCTATCAATCTCTTACTCTTCTTGCTCTTACGATCGCCGCTGTCGTCGGTACTATTGCTCAGGCTCCTTCTACCTCCCCCATGACCTCCCCAGCTCCAGTGCCCTCTTCATTTGATTCCACCTCTTCTCCGACGAGCTCACCAGATTCAGCAACGGTTTCCGCAAGCTCGCCAGGTTCATCTACCTTATCTCCATCTTTACTCGATGGAACTCCCACCACCTCGCCCGATGTCTCTGCCTATGCTCCGTCAATCTCTGTGGCTCCTGCATTCATGCCGGATTCCCCCAATTTCCACGCTCAGTCACCAACGACCGAGACAGCTCCAATTAGTTCTCCTCCTGCTGAGACTTCTCGCTTGTTTACAAATGGTTTTCTTGGCCGATAG MAYQSLTLLALTIAAVVGTIAQAPSTSPMTSPAPVPSSFDSTSSPTSSPDSATVSASSPGSSTLSPSLLDGTPTTSPDVSAYAPSISVAPAFMPDSPNFHAQSPTTETAPISSPPAETSRLFTNGFLGR Homology
BLAST of CcUC05G095470 vs. NCBI nr
Match: XP_038887448.1 (putative protein TPRXL [Benincasa hispida]) HSP 1 Score: 107.8 bits (268), Expect = 6.9e-20 Identity = 79/129 (61.24%), Postives = 87/129 (67.44%), Query Frame = 0
BLAST of CcUC05G095470 vs. NCBI nr
Match: XP_038887469.1 (classical arabinogalactan protein 6-like [Benincasa hispida]) HSP 1 Score: 104.8 bits (260), Expect = 5.8e-19 Identity = 78/129 (60.47%), Postives = 86/129 (66.67%), Query Frame = 0
BLAST of CcUC05G095470 vs. NCBI nr
Match: KAA0056285.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall protein DAN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-15 Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of CcUC05G095470 vs. NCBI nr
Match: XP_008450206.1 (PREDICTED: cell wall protein DAN4-like [Cucumis melo]) HSP 1 Score: 91.3 bits (225), Expect = 6.7e-15 Identity = 67/127 (52.76%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of CcUC05G095470 vs. NCBI nr
Match: KAA0056279.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall protein DAN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 3.7e-13 Identity = 69/128 (53.91%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of CcUC05G095470 vs. ExPASy TrEMBL
Match: A0A5D3C1H7 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00200 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.5e-16 Identity = 71/128 (55.47%), Postives = 80/128 (62.50%), Query Frame = 0
BLAST of CcUC05G095470 vs. ExPASy TrEMBL
Match: A0A1S3BPQ2 (cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.2e-15 Identity = 67/127 (52.76%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of CcUC05G095470 vs. ExPASy TrEMBL
Match: A0A5D3C1I1 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00260 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13 Identity = 69/128 (53.91%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of CcUC05G095470 vs. ExPASy TrEMBL
Match: A0A0A0LB81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10 Identity = 65/129 (50.39%), Postives = 78/129 (60.47%), Query Frame = 0
BLAST of CcUC05G095470 vs. ExPASy TrEMBL
Match: A0A0A0L8Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592670 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09 Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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