CcUC05G083290 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC05G083290
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein LITTLE ZIPPER 1-like
Location	CicolChr05: 1962324 .. 1962738 (+)
RNA-Seq Expression	CcUC05G083290
Synteny	CcUC05G083290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCATTCTTCGCGATTCATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTCTACCGACTCTTGAGGTGATTGATTGGATTTTCTTCTTTCTTCTTTCTTCTTCGTTTTCTCTGAATTTGTTATTTACAGAGTTTGTGGATTCGTTTTCAGGAGGATGAGATTCGCGAAGGAAGAGGTCGAGAAAGAAATGGAGATAAAGAATTTGAAATTGTACATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTAGCTCCGATTTGAGTGTCTGCGGCCGGGAAATTAAACAAAATCATCTGTAA

mRNA sequence

ATGTGCCATTCTTCGCGATTCATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTCTACCGACTCTTGAGGAGGATGAGATTCGCGAAGGAAGAGGTCGAGAAAGAAATGGAGATAAAGAATTTGAAATTGTACATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTAGCTCCGATTTGAGTGTCTGCGGCCGGGAAATTAAACAAAATCATCTGTAA

Coding sequence (CDS)

ATGTGCCATTCTTCGCGATTCATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTCTACCGACTCTTGAGGAGGATGAGATTCGCGAAGGAAGAGGTCGAGAAAGAAATGGAGATAAAGAATTTGAAATTGTACATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTAGCTCCGATTTGAGTGTCTGCGGCCGGGAAATTAAACAAAATCATCTGTAA

Protein sequence

MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLSVCGREIKQNHL

Homology

[Close]

BLAST of CcUC05G083290 vs. NCBI nr
Match: XP_038901104.1 (protein LITTLE ZIPPER 1-like [Benincasa hispida])

HSP 1 Score: 193.7 bits (491), Expect = 8.1e-46
Identity = 100/109 (91.74%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEE 60
           MC SSR ILTPSYLACRHRRRP+RVYRLLRRM+FAKEEVE+EMEIKNLKLYMENQSIIEE
Sbjct: 1   MCDSSRLILTPSYLACRHRRRPVRVYRLLRRMKFAKEEVEREMEIKNLKLYMENQSIIEE 60

Query: 61  NERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLSVCGREIKQNHL 110
           NERLRKKAFLLHKENQVLLS+LQNFSNHKP Q SSDLS CGREIKQNHL
Sbjct: 61  NERLRKKAFLLHKENQVLLSRLQNFSNHKPSQPSSDLSDCGREIKQNHL 109

[Close]

BLAST of CcUC05G083290 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_011002 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 96/115 (83.48%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACR-HRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMEN 60
           MCHSS FILTPSYLACR  RRRP+RVY LLRRMRFAKEE     V+ EMEIKNLKLYMEN
Sbjct: 1   MCHSSPFILTPSYLACRQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMEN 60

Query: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLSVCGREIKQNHL 110
           QSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP SSSDLS C  E KQNHL
Sbjct: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSHYKPPHSSSDLSACSWESKQNHL 115

[Close]

BLAST of CcUC05G083290 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29
Identity = 83/103 (80.58%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SSR  LT S+L  RHRRRPIRVYRLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ SS+LS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPSSNLS 102

[Close]

BLAST of CcUC05G083290 vs. NCBI nr
Match: XP_023527865.1 (protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.5 bits (345), Expect = 6.9e-29
Identity = 80/100 (80.00%), Postives = 83/100 (83.00%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SSR  LT S+L  RHRRRPIRVYRLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSS 96
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  KP  SS+
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPLPSSN 100

[Close]

BLAST of CcUC05G083290 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 9.0e-29
Identity = 82/103 (79.61%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SSR  LT S+L  RHRRRPIRVYRLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPGSNLS 102

[Close]

BLAST of CcUC05G083290 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 1   MCHSS--RFILTPSYLACRHRRRP-IRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSI 60
           MC SS   F  TP+ L    + +  +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+I
Sbjct: 44  MCLSSSETFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE--EKKMEMINLKLYVENQNI 103

Query: 61  IEENERLRKKAFLLHKENQVLLSQLQ 84
           I ENE+L+KKA LLH+EN+ L S LQ
Sbjct: 104 IRENEKLKKKALLLHQENKTLFSLLQ 127

[Close]

BLAST of CcUC05G083290 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 23 IRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
          +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 35 LRILNLTRRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 92

[Close]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL
Match: A0A0A0L3S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.3e-40
Identity = 96/115 (83.48%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACR-HRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMEN 60
           MCHSS FILTPSYLACR  RRRP+RVY LLRRMRFAKEE     V+ EMEIKNLKLYMEN
Sbjct: 1   MCHSSPFILTPSYLACRQRRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMEN 60

Query: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLSVCGREIKQNHL 110
           QSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP SSSDLS C  E KQNHL
Sbjct: 61  QSIIEENERLRKKAFLLHKENQVLLSQLQNFSHYKPPHSSSDLSACSWESKQNHL 115

[Close]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 83/103 (80.58%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SSR  LT S+L  RHRRRPIRVYRLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ SS+LS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPSSNLS 102

[Close]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.3e-29
Identity = 82/103 (79.61%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MCHSSRFILTPSYLACRHRRRPIRVYRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQ 60
           MC SSR  LT S+L  RHRRRPIRVYRLLRRMRF KEE     V+ EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S+LS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPGSNLS 102

[Close]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL
Match: A0A6J1IF90 (protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.1e-27
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MCHSSRFIL---TPSYLACRHRRRPIRVYRLLRRMRFAKEE--VEKEMEIKNLKLYMENQ 60
           MC SSRF+L   T S L CRHRRRPIR+YRL RRM+FAK+   V++EMEI+NLKLYMENQ
Sbjct: 1   MCDSSRFMLLSFTRSSLRCRHRRRPIRLYRLFRRMKFAKDRTGVKEEMEIENLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQ FS  K  Q +SDLS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQIFSKRK-SQPNSDLS 102

[Close]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL
Match: A0A6J1F7Z1 (protein LITTLE ZIPPER 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442972 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.6e-26
Identity = 78/103 (75.73%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MCHSSRFIL---TPSYLACRHRRRPIRVYRLLRRMRFAKEE--VEKEMEIKNLKLYMENQ 60
           MC SSRF+L     S L CRH RRPIR+YRL RRMRFAK+   V++EMEIKNLKLYMENQ
Sbjct: 1   MCDSSRFMLLSFNRSSLRCRHHRRPIRLYRLFRRMRFAKDRTGVKEEMEIKNLKLYMENQ 60

Query: 61  SIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSSSDLS 99
           SIIEENERLRKKAFLLHKENQVLLSQLQ  S  K  QS+SDLS
Sbjct: 61  SIIEENERLRKKAFLLHKENQVLLSQLQILSKRK-SQSNSDLS 102

[Close]

BLAST of CcUC05G083290 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 1   MCHSS--RFILTPSYLACRHRRRP-IRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSI 60
           MC SS   F  TP+ L    + +  +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+I
Sbjct: 44  MCLSSSETFSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE--EKKMEMINLKLYVENQNI 103

Query: 61  IEENERLRKKAFLLHKENQVLLSQLQ 84
           I ENE+L+KKA LLH+EN+ L S LQ
Sbjct: 104 IRENEKLKKKALLLHQENKTLFSLLQ 127

[Close]

BLAST of CcUC05G083290 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-10
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 23 IRVYRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 82
          +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 35 LRILNLTRRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 92

[Close]

BLAST of CcUC05G083290 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-09
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 30 RRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL 83
          RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Sbjct: 43 RRRRLLKE--QKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALL 93

[Close]

BLAST of CcUC05G083290 vs. TAIR 10
Match: AT3G52770.1 (protein binding )

HSP 1 Score: 44.3 bits (103), Expect = 7.4e-05
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 43 MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSNHKPPQSSSD 97
          ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  S  K   + S+
Sbjct: 1  MERLNSKLFVENCYIMKENERLRKKAELLNQENQQLLFQLKQKLSKTKNSNNGSN 55

The following BLAST results are available for this feature:

BLAST of CcUC05G083290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901104.1	8.1e-46	91.74	protein LITTLE ZIPPER 1-like [Benincasa hispida]	[more]
KGN56585.1	1.9e-39	83.48	hypothetical protein Csa_011002 [Cucumis sativus]	[more]
XP_022924351.1	3.1e-29	80.58	protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE Z...	[more]
XP_023527865.1	6.9e-29	80.00	protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022980450.1	9.0e-29	79.61	protein LITTLE ZIPPER 1-like [Cucurbita maxima]	[more]

BLAST of CcUC05G083290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IG60	2.2e-09	52.33	Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1	[more]
Q9LZX5	1.1e-08	58.33	Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1	[more]

BLAST of CcUC05G083290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S0	9.3e-40	83.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1	[more]
A0A6J1E9A8	1.5e-29	80.58	protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 ...	[more]
A0A6J1IWC5	4.3e-29	79.61	protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV...	[more]
A0A6J1IF90	9.1e-27	75.73	protein LITTLE ZIPPER 3-like OS=Cucurbita maxima OX=3661 GN=LOC111472719 PE=4 SV...	[more]
A0A6J1F7Z1	2.6e-26	75.73	protein LITTLE ZIPPER 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442972 PE=4 ...	[more]

BLAST of CcUC05G083290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45450.1	1.5e-10	52.33	protein binding	[more]
AT3G60890.1	7.6e-10	58.33	protein binding	[more]
AT3G60890.2	8.4e-09	62.26	protein binding	[more]
AT3G52770.1	7.4e-05	54.55	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..101
None	No IPR available	PANTHER	PTHR33601:SF22	PROTEIN LITTLE ZIPPER 1	coord: 1..89
IPR039312	Protein LITTLE ZIPPER	PANTHER	PTHR33601	PROTEIN LITTLE ZIPPER 4	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC05G083290.1	CcUC05G083290.1	mRNA