CcUC05G082420 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC05G082420
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description50S ribosomal protein L5, chloroplastic
LocationCicolChr05: 1288198 .. 1291339 (+)
RNA-Seq ExpressionCcUC05G082420
SyntenyCcUC05G082420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTCTTCGTTGTTGAGCTCTGCTACGTCGTTGTTTTACGGTCATTCCCCATTCTTCTCGGTCCGTTTTGCTGCACCGATTGCCTGCGGAAACCCTAACAATGTAGCTCCATTGGCGGTGAGAGTAAAAGCCTCGGCTGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAAACCAATTACCTTGAGAAAATCGTGCCGCTGCTTATGGATGAATTCTCCTACGCCAATATCCACCAGGTATTCACAGTATAATTTGGGGAGGTATTGATTGAATTCTTGATTTATTTGCTCGATTGGTCGCTGGAGTTCGTTGGATTTTGACTATATTGCTTCCGGTAGGATAATTTATTTGTTCTGCAACTGTTTGTTATAATTGCTAGAAGAATTGGAAATTCTTAATGGGCTTTTCTTCTTATTTCAATTCGAGTATGCATCTTGCATACAACCGCTTGGATTCGCGGAGCTTTAAGTTTCTAGACACAAGTACTTCTATGTTTGTATGAAAATATGTACACCCCTGTGGAAGATAAGGATTCTTGATGAATTAAATACCCTGAAAACTGAGACGGTTTCCGTATTTGTACTCAGTAGTGGTATTCTACAATACTTGTTTTTTCTTAAATTAAGTTCGAATTTTCATGTTTGGCTGTGATTCTAATTAGTGGGTCTCAAACAATTCTGGTTTTAGTGTTTTTTCCCCCTCCATCTCCAAATTTTGGCAGCCCATATGATGGCTAAACACAAATTTTTCTAATGAAATATCTGTACCTTTTCTGTTAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCCGCAATGAATGAGTTGGCATCCATTACAGGACAGCGACCTGTGAAAACACGCGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCAACCCTAAGGGGAAATGTGAGTTTCACTTGTTCCTCTTAGAATTTTCAGCTAGTCACTGTTTCTTCTGATCTTTTGGTGTCTGTTATAGTCCTCAGTGCAACTTGGTTCAGCATATCTTGATATGGAACATGCATTTTGATATTTGGATTTGGCTCTGATTTTCAATATTTGTAGTTAAAAACATTTCTTATGTTCCTTTACATGTCTATCTTGCCTGTCTTGAATTATAACGTCAATGATCTTTATATGCTTTTAACGCATTCGGTGTAGTGGATGTCTCTAGTAGGATGATGTAAGGAATTCAATTGGTTGAGATAATAATATAAAAGAAGTGTGAAAGAATGACTTCGGAGGAGAGGAGGGAGTTGCTCCTTCATGCCATGGGCTTGATAAACATTACCATGATACTCGTCTAATGAAAATGATTTGTGTGCAATTGTCAATTAGTTGAAAGGACAAAATAGACGCAACGCTCTCTTGTGTATTCTTATAATTGAAGGGAGGTAGCATCATTAAATGGAAGAAGGCATGCATGTCGCTGCAGGCATTAGTATCATTTTGATGATCCGTAAATGCCTCAATGCATTCAGTGCAGCAGATTTCTCTGTATAATGATGTTAGGAATTTGATTCTTTGAGATAATTATCCAAACCAAGTGCAGAGAATAGCCTCGTAGTAAGGAGTTGCTCCTTCGCAGGCTTGATACTCGTTTAGTTAACAAGATTTTTGTTTTCATGTCAATTACTATGGAGTATGTGGAAGGACAAAAAACATAAGGAGTATTAAAGATCTGATATTGCAATAATGGAAGGTATCTCGAATCATTACATGGAAGAAGTTCTGGATATTGCTTTGTGTCCTAATTGTTAAAAGGACTTGATTTTTAGCTGCTTGCTTGTGTTGACTACTGTACTTAAAGGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGTTGCCTAGAACAAGGGACTTTCAGGGACTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGTATCCGCGAACAGAGCGTGTTCCCAGAAATAAAGTTTGATACACTTGGCAAACCAAGGGGAATGGACGTTTGCATCACAACAACAGCTGAAACCGATCAAGAAGCCCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTAGTGGTTCTGCAGTTGTGATGAGGAAAAAGAAGCTAAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTAATGAGTGCATTTTAGGAACAAGGCTTTTACATTTCCTCAATTCATCTGTTGTATTTTTACTAGAAAAAACTATACTCTAGCAAATTTAGCTGGGTTGTATGCTAACTTGATGAAGTTATAGAGGTTTGTTTATGAGATTAGTTCCTTTAGCTCAGAAAGTCGATGGGCAATTTCGCAGTCCTGAACAGAGTTTTAGCACCGGATGCTGCATATGAACAGTATCCCCATAGCCATTGAACAAACCATAGGCCTTGCTAAAGAAAACAAACTTTTGTTATGAGAATTTGGATGGGCAGTAAAACTAGATTTAAAGCCACGTCACTAATTCAATCACTGGTTAGCTATTATAAATTATAGCATGTGAATTTGTAGGGGTTACATTTTTACTTTAAAAAACAATGTGTGAGAAGTTATATAAGTCTATTCGAAACTATGGAATAGAGAAATGAGAATCTTCAAAAAGCTCCCTAGTTTCTGTATGAATTTGACAATTGTGTTAATAAGGTCTGTTTTTGCTTGTGAATTTTGATTCTCTATTATCAAGTCGGCCAACCTTTCAAAATTTGTACCATTTCCCCCTTGTACCAATTGTTTCACGTCATGGATTTTATTTTAGAAAATTCTCTTTAGGAAAAAAAAAAAAAAAAAAACTTTTGGTCTTTGTTAGAATTTTTGTCTAACTTTTTAAATTCGACATTTTTGTTTGTTCTTTCATCCATATGACTAATTTTTTTATTCTCTACTTCTTTTTGCTCCTTTCATCTTATTTTCCTCTTTGCAAACTTTATATATATAATATATATAAGTAAAACTCTTCAGGTCCCTAAGTTTTTTCTTTCAATTTCGGGTATTCATCCATAAGCTTCACTATCTCAGGCCTCTCTAA

mRNA sequence

ATGGCCTCTTCTTCGTTGTTGAGCTCTGCTACGTCGTTGTTTTACGGTCATTCCCCATTCTTCTCGGTCCGTTTTGCTGCACCGATTGCCTGCGGAAACCCTAACAATGTAGCTCCATTGGCGGTGAGAGTAAAAGCCTCGGCTGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAAACCAATTACCTTGAGAAAATCGTGCCGCTGCTTATGGATGAATTCTCCTACGCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCCGCAATGAATGAGTTGGCATCCATTACAGGACAGCGACCTGTGAAAACACGCGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGTTGCCTAGAACAAGGGACTTTCAGGGACTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGTATCCGCGAACAGAGCGTGTTCCCAGAAATAAAGTTTGATACACTTGGCAAACCAAGGGGAATGGACGTTTGCATCACAACAACAGCTGAAACCGATCAAGAAGCCCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTAGTGGTTCTGCAGTTGTGATGAGGAAAAAGAAGCTAAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTCCCTAAGTTTTTTCTTTCAATTTCGGGTATTCATCCATAAGCTTCACTATCTCAGGCCTCTCTAA

Coding sequence (CDS)

ATGGCCTCTTCTTCGTTGTTGAGCTCTGCTACGTCGTTGTTTTACGGTCATTCCCCATTCTTCTCGGTCCGTTTTGCTGCACCGATTGCCTGCGGAAACCCTAACAATGTAGCTCCATTGGCGGTGAGAGTAAAAGCCTCGGCTGGTGGCGCTATAGTGCTTGTGGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAAACCAATTACCTTGAGAAAATCGTGCCGCTGCTTATGGATGAATTCTCCTACGCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCCGCAATGAATGAGTTGGCATCCATTACAGGACAGCGACCTGTGAAAACACGCGCAAAGAAGTCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCAACCCTAAGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGTTGCCTAGAACAAGGGACTTTCAGGGACTGAACTCAAATAGCTTTGATGGACATGGAAATTACTCCATCGGTATCCGCGAACAGAGCGTGTTCCCAGAAATAAAGTTTGATACACTTGGCAAACCAAGGGGAATGGACGTTTGCATCACAACAACAGCTGAAACCGATCAAGAAGCCCAGCGACTCTTGGCTCTCATGGGAATGCCTTTCAGAGAGAGTAGTGGTTCTGCAGTTGTGATGAGGAAAAAGAAGCTAAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGAGCTCGGAGGTCCCTAAGTTTTTTCTTTCAATTTCGGGTATTCATCCATAAGCTTCACTATCTCAGGCCTCTCTAA

Protein sequence

MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAVVMRKKKLKSHHFDSKSKGRARRSLSFFFQFRVFIHKLHYLRPL
Homology
[Close]
BLAST of CcUC05G082420 vs. NCBI nr
Match: XP_038878175.1 (50S ribosomal protein L5, chloroplastic [Benincasa hispida])

HSP 1 Score: 500.7 bits (1288), Expect = 8.2e-138
Identity = 256/269 (95.17%), Postives = 261/269 (97.03%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEA 60
           MASSSLLSSATS F+GHSPFFS RFAAPIACGNP+N+APLAVRVKAS GGAIVLV+KAEA
Sbjct: 1   MASSSLLSSATSSFHGHSPFFSARFAAPIACGNPSNIAPLAVRVKASTGGAIVLVDKAEA 60

Query: 61  EKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLK+NYLEKIVPLLMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYLEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
           SITGQRPVKTRAKKSIATFKIREGQPLGIA TLRGNVMYSFLDRLINLGLPRTRDFQGLN
Sbjct: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIATTLRGNVMYSFLDRLINLGLPRTRDFQGLN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           ES GS  VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESGGSVAVMRKKKLKSHHFDSKSKGRARR 269

[Close]
BLAST of CcUC05G082420 vs. NCBI nr
Match: TYK17619.1 (50S ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 491.9 bits (1265), Expect = 3.8e-135
Identity = 253/271 (93.36%), Postives = 265/271 (97.79%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRF+AP+ CGNP+NVA LAVRVK  ASAGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES+G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. NCBI nr
Match: XP_008438004.1 (PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo] >KAA0048949.1 50S ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 253/271 (93.36%), Postives = 264/271 (97.42%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES+G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. NCBI nr
Match: XP_004133849.1 (50S ribosomal protein L5, chloroplastic [Cucumis sativus] >KGN56524.2 hypothetical protein Csa_011628 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 7.2e-134
Identity = 252/271 (92.99%), Postives = 261/271 (96.31%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRFAAP+ CGNP+NVA L +RVK  AS GGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NYLEKIVPLLMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAA+NE
Sbjct: 61  EAEKVNRLKSNYLEKIVPLLMDEFSYDNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAINE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESGGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. NCBI nr
Match: XP_022147519.1 (50S ribosomal protein L5, chloroplastic [Momordica charantia])

HSP 1 Score: 482.3 bits (1240), Expect = 3.0e-132
Identity = 246/269 (91.45%), Postives = 258/269 (95.91%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEA 60
           MA+SSLLSSA S F+GH P FSVRF AP ACGNP+NVAPLAVRVKA+AG +IVLVEKAEA
Sbjct: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60

Query: 61  EKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLK+NY+EKIVPLLMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+N
Sbjct: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           ESSGSA +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269

[Close]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match: P82192 (50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL5 PE=1 SV=3)

HSP 1 Score: 344.4 bits (882), Expect = 1.3e-93
Identity = 186/266 (69.92%), Postives = 216/266 (81.20%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEA 60
           MAS+SLL S +S F G      VRF    +      V   +  VKA+AG A V V+KAEA
Sbjct: 1   MASTSLLQSTSSSFAG------VRFHCRTSAA--PRVGLSSFTVKAAAGTA-VFVDKAEA 60

Query: 61  EKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           E +NRLKTNY+EK+VPLL +EFSY+NI +VPK+ KIVVNCGIGDA QNAKGL+AA+NELA
Sbjct: 61  ETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELA 120

Query: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQRPVKT+AK SIA FK+REG  LGIA TLRGN+MYSFLDRLINL LPRTRDFQG+N
Sbjct: 121 LITGQRPVKTKAKTSIAGFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
            NSFDGHGNYS+G REQSVFPEIK + +GK RGMDVCITTTA+TD+EA +LL+LMGMPFR
Sbjct: 181 PNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVCITTTAKTDKEAYKLLSLMGMPFR 240

Query: 241 ESSGSAVVMRKKKLKSHHFDSKSKGR 267
           E SG + ++RKKKLKSHHFD+K KGR
Sbjct: 241 EGSGPSTLVRKKKLKSHHFDAK-KGR 256

[Close]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match: O04603 (50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.4e-92
Identity = 180/270 (66.67%), Postives = 216/270 (80.00%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKA 60
           MAS SLL S+ S F+G       RF +P+A  +   +   PL   VK SA G  VLVEK+
Sbjct: 1   MASPSLLQSSASSFHG-------RF-SPLAAPSSARMLSPPLRNVVKVSASGT-VLVEKS 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEK  RLKT YLE+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM +
Sbjct: 61  EAEKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKD 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           +A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG
Sbjct: 121 IALITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           ++ +SFDG+GNYSIG+++Q VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMP
Sbjct: 181 VSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMP 240

Query: 241 FRESSG--SAVVMRKKKLKSHHFDSKSKGR 267
           FRE  G  +  ++RKKKLKSHHFD+K KG+
Sbjct: 241 FREGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match: Q9ZST0 (50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 299.3 bits (765), Expect = 4.8e-80
Identity = 152/248 (61.29%), Postives = 188/248 (75.81%), Query Frame = 0 

Query: 19  PFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEAEKVNRLKTNYLEKIVPLL 78
           P  ++R AA  A   P   AP       ++   IVLV+  EA+KV+RLK  Y +K+VPL+
Sbjct: 36  PRRALRVAASAAADAPPKPAP-----PPTSPSGIVLVDPTEAQKVHRLKAVYDQKVVPLI 95

Query: 79  MDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIAT 138
            +EF Y N+HQVPK+EKIVVNCG+G    N+KGLE+AM +LA ITGQ PVKT+AKKS+A+
Sbjct: 96  TEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVAS 155

Query: 139 FKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQS 198
           FKIREG  +GIA TLRG VM++FLDRLINLGLPRT DF G+N NSFDGHGN++IG+R+Q 
Sbjct: 156 FKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQG 215

Query: 199 VFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESSGSAVVMRKKKLKSHH 258
           VFPEI ++  GK  GMDVCI TTA+TD EA RLL L+GMPF E   S+VV+RKK+LK HH
Sbjct: 216 VFPEIPYEVGGKKNGMDVCIVTTAKTDNEALRLLTLLGMPFAEHIKSSVVIRKKRLKRHH 275

Query: 259 FDSKSKGR 267
           F SK +GR
Sbjct: 276 FMSKGRGR 278

[Close]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match: B8HMR6 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplE PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-61
Identity = 113/177 (63.84%), Postives = 141/177 (79.66%), Query Frame = 0 

Query: 65  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITG 124
           RLKT YLE  VP LM++F Y NIHQVPK+ KI +N G+G+A QNAK LEA++NE+A I G
Sbjct: 4   RLKTYYLENAVPKLMEQFKYKNIHQVPKLVKITINRGLGEAAQNAKSLEASLNEIALIAG 63

Query: 125 QRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSF 184
           Q+PV TRAKK+IA FKIR+G P+GI  TLR + MY+F DRLINL LPR RDF+G+N  SF
Sbjct: 64  QKPVVTRAKKAIAGFKIRQGMPVGIMVTLRSDRMYAFFDRLINLALPRIRDFRGVNPKSF 123

Query: 185 DGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRE 242
           DG GNYS+G+REQ +FPEI +D++ + RGMDV I TTA TD+E + LL +MGMPFR+
Sbjct: 124 DGRGNYSLGLREQLIFPEISYDSIDQMRGMDVSIITTATTDEEGRALLKVMGMPFRD 180

[Close]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match: P73308 (50S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rplE PE=3 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 4.9e-61
Identity = 112/176 (63.64%), Postives = 141/176 (80.11%), Query Frame = 0 

Query: 65  RLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELASITG 124
           RLKT Y E I+P L +EF Y NIHQVPK+ K+ VN G+G+A QNAK LE+++ ELA+ITG
Sbjct: 4   RLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITG 63

Query: 125 QRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSF 184
           Q+PV TRA+K+IA FKIREG P+G+  TLR   MY+FLDRLINL LPR RDF+G++ NSF
Sbjct: 64  QKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSF 123

Query: 185 DGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 241
           DG GNYS+GIREQ +FPEI +DT+ + RGMDV I T+A+TD+E + LL  +GMPFR
Sbjct: 124 DGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEGRALLKALGMPFR 179

[Close]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match: A0A5D3D3L2 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004890 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135
Identity = 253/271 (93.36%), Postives = 265/271 (97.79%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRF+AP+ CGNP+NVA LAVRVK  ASAGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFSAPVGCGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES+G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match: A0A5A7U637 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001700 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 253/271 (93.36%), Postives = 264/271 (97.42%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES+G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match: A0A1S3AVB4 (50S ribosomal protein L5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483250 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 253/271 (93.36%), Postives = 264/271 (97.42%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVK--ASAGGAIVLVEKA 60
           MASSSLLSS+TS F+GHSPFFSVRFAAP+  GNP+NVA LAVRVK  ASAGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEKVNRLK+NY+EKIVPLLMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGL+AAMNE
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           FRES+G+A VMRKKKLKSHHFDSKSKGRARR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match: A0A6J1D186 (50S ribosomal protein L5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016423 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.5e-132
Identity = 246/269 (91.45%), Postives = 258/269 (95.91%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEA 60
           MA+SSLLSSA S F+GH P FSVRF AP ACGNP+NVAPLAVRVKA+AG +IVLVEKAEA
Sbjct: 1   MAASSLLSSAASSFHGHCPLFSVRFPAPGACGNPSNVAPLAVRVKAAAGDSIVLVEKAEA 60

Query: 61  EKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLK+NY+EKIVPLLMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYIEKIVPLLMDEFSYTNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQRPVKTRAKKSIATFKIREGQPLGIAATLRG+VMYSFLDR+INLGLPRTRDFQG+N
Sbjct: 121 LITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGSVMYSFLDRVINLGLPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDT GKPRGMD+CITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTFGKPRGMDICITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           ESSGSA +MRKKKLKSHHFDSKSKGRARR
Sbjct: 241 ESSGSATLMRKKKLKSHHFDSKSKGRARR 269

[Close]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match: A0A6J1ECQ6 (50S ribosomal protein L5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431985 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.8e-129
Identity = 242/269 (89.96%), Postives = 255/269 (94.80%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNVAPLAVRVKASAGGAIVLVEKAEA 60
           MASSS+LSSA S F+GHSP  S RF AP A G P+ VAPL+VRVKAS GGAIVLVEKAEA
Sbjct: 1   MASSSMLSSAMSSFHGHSPLVSARFPAPTALGYPSIVAPLSVRVKASTGGAIVLVEKAEA 60

Query: 61  EKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120
           EKVNRLK+NYLEKIVP+LMDEFSY+NIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA
Sbjct: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNELA 120

Query: 121 SITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
           SITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN
Sbjct: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
           SNSFDGHGNYSIGIREQSVFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMPFR
Sbjct: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240

Query: 241 ESSGSAVVMRKKKLKSHHFDSKSKGRARR 270
           ES+G+A  +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 ESAGAASGLRKKKLKSHHFDSKSKGRSRR 269

[Close]
BLAST of CcUC05G082420 vs. TAIR 10
Match: AT4G01310.1 (Ribosomal L5P family protein )

HSP 1 Score: 340.1 bits (871), Expect = 1.7e-93
Identity = 180/270 (66.67%), Postives = 216/270 (80.00%), Query Frame = 0 

Query: 1   MASSSLLSSATSLFYGHSPFFSVRFAAPIACGNPNNV--APLAVRVKASAGGAIVLVEKA 60
           MAS SLL S+ S F+G       RF +P+A  +   +   PL   VK SA G  VLVEK+
Sbjct: 1   MASPSLLQSSASSFHG-------RF-SPLAAPSSARMLSPPLRNVVKVSASGT-VLVEKS 60

Query: 61  EAEKVNRLKTNYLEKIVPLLMDEFSYANIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMNE 120
           EAEK  RLKT YLE+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM +
Sbjct: 61  EAEKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKD 120

Query: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           +A ITGQ+P+KTRA+ SIATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG
Sbjct: 121 IALITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240
           ++ +SFDG+GNYSIG+++Q VFPEI+FD +GK RGMDVCI+TTA++DQE Q+LLALMGMP
Sbjct: 181 VSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMP 240

Query: 241 FRESSG--SAVVMRKKKLKSHHFDSKSKGR 267
           FRE  G  +  ++RKKKLKSHHFD+K KG+
Sbjct: 241 FREGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]
BLAST of CcUC05G082420 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0 

Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKP 211
           T+RG        +L+  GL + ++++ L  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 128

Query: 212 RGMD 216
            GMD
Sbjct: 135 YGMD 128

[Close]
BLAST of CcUC05G082420 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0 

Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKP 211
           T+RG        +L+  GL + ++++ L  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 128

Query: 212 RGMD 216
            GMD
Sbjct: 135 YGMD 128

[Close]
BLAST of CcUC05G082420 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0 

Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 15  KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 74

Query: 152 TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKP 211
           T+RG        +L+  GL + ++++ L  N F   G +  GI+E  +   IK+D     
Sbjct: 75  TVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 128

Query: 212 RGMD 216
            GMD
Sbjct: 135 YGMD 128

[Close]
BLAST of CcUC05G082420 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = 0 

Query: 92  KIEKIVVNCGIGDAQQNAKGLEAAMNELASITGQRPVKTRAKKSIATFKIREGQPLGIAA 151
           K++K+V+N  +G++      L  A   L  ++GQ PV ++A+ ++ +F IR  + +    
Sbjct: 5   KVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 64

Query: 152 TLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLGKP 211
           T+RG        +L+  GL + ++++ L  N F   G +  GI+E  +   IK+D     
Sbjct: 65  TVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH-IDLGIKYDPSTGI 118

Query: 212 RGMD 216
            GMD
Sbjct: 125 YGMD 118

The following BLAST results are available for this feature:
BLAST of CcUC05G082420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878175.18.2e-13895.1750S ribosomal protein L5, chloroplastic [Benincasa hispida][more]
TYK17619.13.8e-13593.3650S ribosomal protein L5 [Cucumis melo var. makuwa][more]
XP_008438004.13.2e-13493.36PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo] >KAA0048949.1 ... [more]
XP_004133849.17.2e-13492.9950S ribosomal protein L5, chloroplastic [Cucumis sativus] >KGN56524.2 hypothetic... [more]
XP_022147519.13.0e-13291.4550S ribosomal protein L5, chloroplastic [Momordica charantia][more]
BLAST of CcUC05G082420 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P821921.3e-9369.9250S ribosomal protein L5, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL5 PE=... [more]
O046032.4e-9266.6750S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL5 ... [more]
Q9ZST04.8e-8061.2950S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947... [more]
B8HMR61.3e-6163.8450S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395... [more]
P733084.9e-6163.6450S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111... [more]
BLAST of CcUC05G082420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D3L21.8e-13593.3650S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7U6371.6e-13493.3650S ribosomal protein L5, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3AVB41.6e-13493.3650S ribosomal protein L5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483250 ... [more]
A0A6J1D1861.5e-13291.4550S ribosomal protein L5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1ECQ65.8e-12989.9650S ribosomal protein L5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
BLAST of CcUC05G082420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01310.11.7e-9366.67Ribosomal L5P family protein [more]
AT2G42740.11.8e-0528.23ribosomal protein large subunit 16A [more]
AT3G58700.11.8e-0528.23Ribosomal L5P family protein [more]
AT4G18730.11.8e-0528.23ribosomal protein L16B [more]
AT5G45775.11.8e-0528.23Ribosomal L5P family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 86..142
e-value: 3.1E-26
score: 91.4
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 57..242
e-value: 3.4E-74
score: 250.3
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 65..240
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 146..239
e-value: 1.2E-32
score: 111.9
NoneNo IPR availablePANTHERPTHR11994:SF454S RIBOSOMAL PROTEIN L7, MITOCHONDRIALcoord: 59..241
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 59..241
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 119..135
IPR020930Ribosomal protein L5, bacterial-typeHAMAPMF_01333_BRibosomal_L5_Bcoord: 63..241
score: 40.931889

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC05G082420.1CcUC05G082420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome