CcUC03G057180 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGAGCCAAACCCTAACTCTTCATTTCTCGACCTTCGATCACTTCTTTTTCCTGTGTTTATCGGTTATTTTATCTGTAAGAATCTGTTTGTGAATTGTGTGTATTCGTGCTTTGATCGATTTTCAGGGAAAGTACACGGATCTCTGGCTCGTGCCGGGAAGGTGAGAGGTCAAACTCCGAAAGTAGCAAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTTACTGCAGGTAACCTATTGTTCTTAACTTCATTTGCTTTTCCGATGTATTGCCGGTTTAGAATTGCTTATTTTGGTTTAACATCGTATTCAATCACTATTTTACGGGTTATGGTAATTGGTTTGTTTGGGATTACATGTAGCTCTGTATAATAATCATTATTGCATTAGTAAGGTTTTCGTTTCAGGATTCGATAAGCATCGTTCTAATGTGCGATTATTATTTGTTTGATCTTTGCAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAAGCAAACAGCAAACCGGGGGGGGGGGGGGGGG ATGGGTGAGCCAAACCCTAACTCTTCATTTCTCGACCTTCGATCACTTCTTTTTCCTGTGTTTATCGGTTATTTTATCTGTAAGAATCTGTTTGTGAATTGTGTGTATTCGTGCTTTGATCGATTTTCAGGGAAAGTACACGGATCTCTGGCTCGTGCCGGGAAGGTGAGAGGTCAAACTCCGAAAGTAGCAAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTTACTGCAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAAGCAAACAGCAAACCGGGGGGGGGGGGGGGGG ATGGGTGAGCCAAACCCTAACTCTTCATTTCTCGACCTTCGATCACTTCTTTTTCCTGTGTTTATCGGTTATTTTATCTGTAAGAATCTGTTTGTGAATTGTGTGTATTCGTGCTTTGATCGATTTTCAGGGAAAGTACACGGATCTCTGGCTCGTGCCGGGAAGGTGAGAGGTCAAACTCCGAAAGTAGCAAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTTACTGCAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAA MGEPNPNSSFLDLRSLLFPVFIGYFICKNLFVNCVYSCFDRFSGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK Homology
BLAST of CcUC03G057180 vs. NCBI nr
Match: KYP67165.1 (40S ribosomal protein S30 [Cajanus cajan]) HSP 1 Score: 125.2 bits (313), Expect = 3.4e-25 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. NCBI nr
Match: KOM44808.1 (hypothetical protein LR48_Vigan06g011400, partial [Vigna angularis]) HSP 1 Score: 125.2 bits (313), Expect = 3.4e-25 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. NCBI nr
Match: RZR96505.1 (hypothetical protein BHM03_00025534, partial [Ensete ventricosum]) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25 Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of CcUC03G057180 vs. NCBI nr
Match: KAG6404511.1 (hypothetical protein SASPL_136760 [Salvia splendens]) HSP 1 Score: 124.8 bits (312), Expect = 4.4e-25 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. NCBI nr
Match: KAF3454219.1 (hypothetical protein FNV43_RR04666 [Rhamnella rubrinervis]) HSP 1 Score: 124.4 bits (311), Expect = 5.7e-25 Identity = 63/74 (85.14%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy Swiss-Prot
Match: P49689 (40S ribosomal protein S30 OS=Arabidopsis thaliana OX=3702 GN=RPS30A PE=3 SV=3) HSP 1 Score: 118.6 bits (296), Expect = 4.1e-26 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy Swiss-Prot
Match: P62866 (40S ribosomal protein S30 OS=Bos taurus OX=9913 GN=FAU PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy Swiss-Prot
Match: P62860 (40S ribosomal protein S30 OS=Cricetulus griseus OX=10029 GN=FAU PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy Swiss-Prot
Match: P62861 (40S ribosomal protein S30 OS=Homo sapiens OX=9606 GN=FAU PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy Swiss-Prot
Match: P62862 (40S ribosomal protein S30 OS=Mus musculus OX=10090 GN=Fau PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy TrEMBL
Match: I1J9W0 (40S ribosomal protein S30 OS=Glycine max OX=3847 GN=GLYMA_01G209400 PE=3 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy TrEMBL
Match: A0A151TJD2 (40S ribosomal protein S30 OS=Cajanus cajan OX=3821 GN=KK1_013488 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy TrEMBL
Match: A0A0L9UPY5 (40S ribosomal protein S30 (Fragment) OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g011400 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25 Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy TrEMBL
Match: A0A444F7Y5 (40S ribosomal protein S30 OS=Ensete ventricosum OX=4639 GN=GW17_00017242 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25 Identity = 71/101 (70.30%), Postives = 78/101 (77.23%), Query Frame = 0
BLAST of CcUC03G057180 vs. ExPASy TrEMBL
Match: B9FRR9 (40S ribosomal protein S30 OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_20291 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of CcUC03G057180 vs. TAIR 10
Match: AT2G19750.1 (Ribosomal protein S30 family protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. TAIR 10
Match: AT4G29390.1 (Ribosomal protein S30 family protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CcUC03G057180 vs. TAIR 10
Match: AT5G56670.1 (Ribosomal protein S30 family protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.9e-27 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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