
CcUC02G038570 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTGCTCCGATTCGTCTGAAATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTTAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGTCTTTTCATCTGCCTTTAAATTTCTCTGAATTCCTGATTTCTGTTTTACTTCAACTCTGAATTTCTAACTGTTTGGTTAGTTTGAAGATTGAATCAAATGAACTAGGGCTGAAAATGTGCATCGATTTGGTACAAACTAACGACCTTGTTGCAATGAGATTTGGAGTATTAAGTTTCTTAAAATCGTCTTTTCTTAAGATTTTTGTTGCAAGAGCCGCCGTAAATTATATGAGACTTTTCTTTCTAACATTTTGTTTGATCCTAAACTTTCTTCATCATATCTTTTCAGCCACTTAACCTACTAAACTTTACATTATGTTTCTGTTAACATTGTTCACCTTATTTGTTATACAATATAAATTTTCGAGGTGTGGAAGTTTGAAAAAGTAGTATTCTCAGACCAACTCAAAAGCTAAGCCTGATGGGATTTTCATTTCTCATTTTCCTCTATATGAATAGTTAAATTTACAACACAAGAAGAGCTCTCTGCAAAAACCCATTTGTCATGAACTGAAATTTCTCTTGGGTCATTGTTTAAACAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATCATCTGACCTTTCTTTTTTTAGTGTATGCATTTAAGGTGTTTGATAAAATGTTCCGGTGAAGTTTCTCCAAACTTTTAAGCCAATTTGTGGTTGTGGGTAGGAGAAACTTTGTGGAAAATACAACAGAAATCTAGTTTCTTGTTATGATTAAATTACTAATGAAATGGACAAAACAAAAGGAGGGAAACCAAAGCTTTATTAGGGATATGTCTTTATCCATAATCTCTTTGTTTAGGCCAAAAAAGAAAGAGACAAAAAAAAGAAAAGAAAAAAGAAAGAAGGGGAAAAGCAGATGCCTTGGTATAATCAGTGTGAAAGAGATGCATACCAATTGCTTAACCATCTCTCCTTTGAAATAAAATATTCATTAACAAGTCAG TTTTTTTTTGCTCCGATTCGTCTGAAATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTTAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATCATCTGACCTTTCTTTTTTTAGTGTATGCATTTAAGGTGTTTGATAAAATGTTCCGGTGAAGTTTCTCCAAACTTTTAAGCCAATTTGTGGTTGTGGGTAGGAGAAACTTTGTGGAAAATACAACAGAAATCTAGTTTCTTGTTATGATTAAATTACTAATGAAATGGACAAAACAAAAGGAGGGAAACCAAAGCTTTATTAGGGATATGTCTTTATCCATAATCTCTTTGTTTAGGCCAAAAAAGAAAGAGACAAAAAAAAGAAAAGAAAAAAGAAAGAAGGGGAAAAGCAGATGCCTTGGTATAATCAGTGTGAAAGAGATGCATACCAATTGCTTAACCATCTCTCCTTTGAAATAAAATATTCATTAACAAGTCAG ATGGAAGGGAGTGATTCAATCGCCACCGTTTCATCAACTCCGCTATCTCAATCTCCTTCTTCTTCTTCTCCGGCACCGCCGCCGCCCGTCGTTCTTAGTCCATGTGCGGCCTGCAAGATTTTGAGACGGCGATGTGCCGAACGATGTGTTTTGGCGCCTTATTTCCCTCCCACTGAGCCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAATTCTTGCAGGAACTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCGAGAATTAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTTCAAAAGCAAGTCAATGAGCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGGTTGTGAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAGTCTCATCATCAGTCTTTTGATGATTTCAATGGCAGCCCTCATAATGGCTTATTATTCCAGAGCATCAGCCCAAGCTACTTTGATGATAGCAATGTAAACTCATTGTGGGAACCTCTTTGGACATGA MEGSDSIATVSSTPLSQSPSSSSPAPPPPVVLSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHHQSFDDFNGSPHNGLLFQSISPSYFDDSNVNSLWEPLWT Homology
BLAST of CcUC02G038570 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida]) HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93 Identity = 189/197 (95.94%), Postives = 191/197 (96.95%), Query Frame = 0
BLAST of CcUC02G038570 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91 Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of CcUC02G038570 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima]) HSP 1 Score: 339.0 bits (868), Expect = 2.8e-89 Identity = 177/196 (90.31%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of CcUC02G038570 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88 Identity = 183/201 (91.04%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of CcUC02G038570 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88 Identity = 180/197 (91.37%), Postives = 183/197 (92.89%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 7.2e-56 Identity = 123/196 (62.76%), Postives = 145/196 (73.98%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 209.5 bits (532), Expect = 3.3e-53 Identity = 124/215 (57.67%), Postives = 150/215 (69.77%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 5.7e-37 Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.7e-36 Identity = 90/170 (52.94%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31 Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91 Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91 Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 177/196 (90.31%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 177/196 (90.31%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of CcUC02G038570 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 6.7e-89 Identity = 183/201 (91.04%), Postives = 188/201 (93.53%), Query Frame = 0
BLAST of CcUC02G038570 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 218.4 bits (555), Expect = 5.1e-57 Identity = 123/196 (62.76%), Postives = 145/196 (73.98%), Query Frame = 0
BLAST of CcUC02G038570 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 ) HSP 1 Score: 209.5 bits (532), Expect = 2.4e-54 Identity = 124/215 (57.67%), Postives = 150/215 (69.77%), Query Frame = 0
BLAST of CcUC02G038570 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 155.6 bits (392), Expect = 4.1e-38 Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 0
BLAST of CcUC02G038570 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37 Identity = 90/170 (52.94%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of CcUC02G038570 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32 Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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