CcUC02G038440 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G038440
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DNA repair protein RAD51 homolog 2
Location	CicolChr02: 33858747 .. 33866398 (-)
RNA-Seq Expression	CcUC02G038440
Synteny	CcUC02G038440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGTTCATGTTTCTTTAGTTTTGCCGCCATTTCAACTGCTTACCCTTTACCTGATCAACCATTCTAGGGTTTCGTATTTGGCGGGAAAGCAAAGAACCAACCAGCGACATAGCATGATTTGGCAGAGAGATTGAAGTTGATAGAATGGCGAACAGATTAATTAATCAGATGGGATTACCCAGATCGATTGCCAACATTTTCGCTGCGCGAAATATTAACACAGCTAAGGTAATGAATGAAACTTCGTGGTTTCTCACCATTAATTTGTCGATTTATTCATCCAGTTCGTGTTAAATACGCCATAATTAGAAACCGAGGTGAATCCTTTGCATCATGTAGTTCAGACGAACAACTTGACACGCTACTTCCTTTTAAGTTTCTCAATTGACCACTTATTGGAAATCCTTCATGTGGAAATTAAACTTTTGCAATGGTTCTTAATTTAGAGCGAATTCATAATGTCACGTATTGATCGAGATTTTCTCTTTTGAGTTGTTTTTCCATTCCTGGCTGCATTATTTTTCCGCCCTTTAGTCTGTTTTAGCCTATAGAAACAGAAATTGCAGAATTAGTTTATTTAATTTGTTTCAGGAAGCTTTATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGATGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATTGCTTCTCCACCTTATCAGACCGTAAGCAATTAGTTGATTCTGTTTAATTGGTTGGAGCCTATTAAACTTCTCTAAGATGGGGTGTTTCTTTTGACATCTTTGACTTCTGTTGCTTTTAGAAGTGATGTTCTAGTGGCGTCTGTAGGTTCTTTCTCTGATGGAGCAAAGACTTCAAAACGAACATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGAATACCATTTGGTGTCTTGACAGAACTTGTTGGTCCAGCTGGAATTGGCAAAACACAAGTGTGATTCTTTCCTGGCTTCTGGTTTGTTAAATCTTTATTTTATATCGGAAAACTTTCACTGGTTGGAGTATCAATTGAGAATCTGTGATTGCCTTGAAGCTGTAGCCTTTTAACAAATTTCTGCTGACTCGCTACTTCTGCTGTTTGTTGGATTTCAGTTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTACCATCAAGCTACGGAGGTTTGGATGGCCGTGTAATATATATTGACGTAGAATCTAAGTTTAGTTCCAGAAGGTATTTAAATATGCCATCGTATTGGATGTTTCTATATTTGTGCAATGGGCACATGACTTCTTTGCTTTTTCATCTCCCTGTTTCTTTCTCCAGGATGATTGAAATTGGTATGAGAAGCTTTCCTGATGTATTTCACAAGAAAGACATGGCACAAGAGGTATTAAAATAATAAATATCCTCTTCTTTTAAAATTTTAATTTATAGTGCTTAAGATGGATCGTTTTCAATTTACATTCTAGATGGCTGGTAGGATCCTTGTTTTGCGGCCTGCATCACTTTCCGAATTCACTGAGAGGTTTGATCAATGTCAACTAAATTTTATTTGGCCTAGCCTTGTCAATGATTCGTGAGGGAAAAAAAATGCTGATGATAACATGAATTAGTCTGCAAATTTTTAGCAGAATGCGTACTCATAGAAAAAGAAATTGGGGTTATTTGCGATAAACATGCTCTAGTTACAGATTGGTTCAACTGCAATGACAATGAATATTCAAATGGAATACAAGTGAGGTGATTGTGAGTGTCGTTCCTAACTAATGTCTGACGTCAAGTACCAGAGGGTTCATCTGATCGCTTCCTATATGGAGGGCATAAGTTTTTGGCTCCAATGTGATGGGAGCACAAATGAAATGCCAACATATACATTTGTTTAAGTTATAGCAATGAGATCTGAATAAGTCTGTATCTTGTACTGCTTCTACGAGAGATTTATTATGTGCACTCGACATGCAATGCTCAAACTCAATTCAATTATCTAATAAAATTGCTGCAAATTCAGCATGTCGAGTATATTCTCTTTTCCCTCCAACCTATGAACCCATTAAAGATTTTCAATATTTGCATTGATATAGCTCTATGGTTATGGATTTTGAGGTATATTTTCATGAAATGTCCATGAATTTACTCAGCTTATTTTTGTTAGGATTTTCAACAGCTGCCATGGTAAGAGGTTTGTTAGGATACTTCCTAACAGGAATCACAATTTGGAGTATATTGAAATGTAAAGGAAATACTACAAGATAACCCAAGTATTGAGGAACTTGGAACCTCCTTCTTGAGTGAGCACAATCAAGCCCCTATACCACTCCATGGAATTCCCTCACTCACCCTTCTTCTTTTTATAACCACATTCAGTAACTAACTATTTATCAAATTGCCCTTATACCCTTTTACTAATATCATACTAATTATCTAGGTATTTAACAAGTTTCTGTTGTCTGTTTTTCCAGTTTGCACAAAATCAAGGTTTCACTTCTTGAGCAAGAAGTAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGTAACTCATTTTTTTCTCTCTCCTGACTTGTACTCTTATCTTCTGTTCAAATGAGGCTTCTACACCCAGCTTCAGTTGGGGTCTCAATTTTCGTTGGTGTGTCCTAACGTGGCTTCAGTTTTACAATATGTAGGTTTCTTCAATAGATTTCTCTGTTCGTTCAATTTTCTACATGGTTCAATCAAGAGTCCTAATAATTTTGGTCACAGTTTTCATCTTTCTTAAAAAAGGAGTTGAATTATTAGCCAAATTCCAACAACAAAAACAAGTTTTTGTTTTTTATTATTTCTTGTTTTTTTTTTTTTTTTAGTTTTCAAAACTTAGCTTGGATATCTTTGGATGTTTCATCAATGAAATTGATTCTTAAAAAATAATAATAATAAAATAAAATAAAATAAAATTTGGTTTGGTTTTTGAAAATATTGGTAGTAAAGTAGATAACAAGGCAAGAAATTTAGAGGTTGAAGTGATGTTTATAGGCTTAATCTTCAAAAACTGAAAACCAAAAACCAAATAGTTACTAAACAGGGCCTTAACTTTTAGTGTTTGGTTTTTGAAAATTACAATTGTTTTCTTACTTCTTTACTTTGGTTTTTGAGAACTTCTTTTTTCCGGTTTTCAAAACCTAACTTAGTTTTTGAAAACACTCCTAAAAAGTAGATAGCAAAACAAAGAAATCAATAGGTAGAAGTAGTGTTTATAAGCTTAATTTTCAAAAATCAAATGGTTATCAAATGGGACCATTGTTTTTTGTTTTCTCTTTCTCTAGATCAAGCTGATTTTTTTTTTCTTTGGAATTTGGATAACTCTTTAAAATCTTAGCCAAATTTTAAGGCCTAAATTAGTAGTTTTCAAGAACTTTATGTTAGGTACTTAAAGCATCTTGGAGAACCACACCCTAAAAAGCTAGCTATTGTGGTGGGAGAGCCAAGTCACTTAAGTACCACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGATAGCCCATACTACCTTGGTTCCTAATAATACCCCATCCCTGGAAAGTCAACATCCTAGCGGCTACTCCGACGGTACTTCACTAGGCCTCACCCGGTAGAACTCTCCACCAGTTCCACTCTAAACATCAACCACCAGCTTTGATACCATTGTTAGATACTTAAGTATCTTGGAGAACCACACCCCAATAGCTAGCTTTTGAGGTAGGAGAGCCAAGTTACTTAAGTACCACATTGGTCATCCCATTCTAACCAATGTGGGACAAAGGTAGCCCATACTACCTTGGTTCCTAATACTTTATCTTAAATAAGTAGTAGACTAAGATTTAAAGAGTGGAAAAATAAACCAAAAAAATGAGTAAACTAGCTTAAACTTTAGAAACAAAATTATCTCAAATTGGCCAAAAATGTCAAATCTTAGCTTTGATCTTTTGTGCTATAATGTATTTTTTAGGAGAATTCCCCATATTATTTGAAACAAAACCACATTGGGGTAAGAATGAATGGTTATTCATAGTGCATTTCTGTCAGCTTCTATCTGATGCTTTAAGGAAGGGTTCTTTTTCCAGGGAGTATGAGCAAGGGGTACCCAAACAGCATTCATTGGGTTGGCATATTTCGTTTATCAAGTGAGATTTAATTCCGTATTACTCCGGTTGGGTTTTGTTGCGTTCTATAACTGTTCCATTTGTCTTCTGAGTGCTCATTTGATTTCCCACCATCTCAGGTCAATTGCTGAGTTTGCACGAATTCCAGTAGTTGTGACGAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGTAGGGTGATGTTATTAATCTGAAATTGATAAAACGTGTTTACTTACTATAGCTTCTCTGTTGCAGGATTGAGCAGGAGTGCAACTCAAGAATGTTCTCCAGAATATGATTCTCATCTTGTTGCTGCCTTGGGTGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTTTGTACACTTTTTAATGATTGTTGCCTTATAGCTCACATAAAGCACAAAATGACACTTTCGGTGTCGATGGAGTCAGATGAACCATCATCTTACAGACATCTTCTCAACTTATTTAACTTTTAAATGGAAAGGGGGTTGTCAAAACTAGAGAAGTTGCTTCTAAACGTTTCATTACTCCTTCTGTAGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCATGATAACCTCATCTGGAATTTCATTGCTGAGCGACAAGGGAAAAGAACTGAGTGGAGCAGCAATCAACGAGATTCTCTGTCAAGGTTAACAGTACCAATATATATTAAAAAAAAAAAAAAAAAAAAACCTTCTCTTCATTTTCCTCTTCTATTGGTCAAAAGTCTAGTTGACTTAAGTTAGAAGCTCGATTAAACTTATAACATTTACACATTGGCATGTTTACTTTTGTTTTTAAACCTGTCAAACTATCAAAACATGTTAAAGAGATCTTTTTGCAAATTCAATATCATTGCCTGCTGATGTTAATGCAATTACCTCCCGGCCTCATTGTCTGAAAATTATCCACCAAGGATGCTACGAGAAGTTGATGCTTTTAGTTGTGTTATTTTCTATGATTCAGTCTAACATATACACTGCACTGGGTTTCTTTTTAGCTTTGTTATCTTTTATTCATTTGATTTTTCAACATTATTGCAGGACAGAGTGATATTATCAGCAATCATTTTGCAAAGCAGCAGTGACCATTGCCACTTAAATGCAAATGAGACTGCTAAAATTTCAAGCTTCTCATGCAATGTATAGGTGGCTTCCGGTTGTTAATGGTCGGTTAACAATGAAATAGTTGATTCCTAATTATTATTTCCATTCTAATTTCTTATTCAATTTTAACATTTGAAATTACAGTGAAGTATTTTTCCCATTTCATGAGAATCCATGATTTATTCTATCATTTTCTTTTTATTCAGGACATGCTTACAGGATAGCTTAGAACTAAACCAGCAGAGCATGGAAGATGGAAGCGATACCCAAGCTGCGGATGATTTTTCTTGAGAGGAATTGCCTACCTTAGTTTCTTTAGTGATAACAATTAGTGGAAAGTACAGGCAGGACTTTGTTTCTCAGTGATAAAAATGTTTAGAAAGTACTGGTAGGACATCATTTTGGTTCATTAATATGCTAGGACAAGGTTGCCAGGAATTTGATCGTCCTTCGGCCAAGCTCCTAACTGAAAACAAAAGCGGGCACCTGTGATGTGCTAGCATTGTGGTTTGGCCCACCCTTTCTTTGATCCTTGTAACGGTGCATCGGGACTTATGCCTATATGCTATATCCATTGAAGCTCTATAGGTTATGGAATATGTTCTGAAAATTTTAAATTATGCCCCTGAAATTGTTGCCTTGAAAATTTTAAATGCCGCACTTTCTTCTGAATATTATCTTGATGATGGAGGTCCCAACATGTTCGTTATACTCATGTCCAGGTGGTGACTACACATTTAGAGAATGAATCTTGCATTATTTAGCAAAAAATATGATGATGCATCAAATCCATGTACTGGACTAAAGTTACAAAGATTCCATAGACCACTTTTGGAACCCTTGGAACTCAATCACTATCAAAACCATGGAATTTGTGTTATGTTCTAAACATGGAGAATACAAATTTCTATGTGACTAATACATTTTATGGTGACGTGAGTATTTCATCGTTCCAAACTTTCAAGTACAGCAAGCTTGGGAAGGAAAAAAATCGAGTTAACCTGAAGGTTTGTATGCAATGTTGTATCCTGTTGTAAGACTGGGCCTACTTGAGGAAAAAAGGAAACTCGAATTAATTTATCTTTTATATTGCAGGTTTTCAATGAAGGAAGATGGCTTGCTGGAAGATAGAGCGAGTTCTCCTGAACCTGTTTTTGGGCATTTTGTGCAAGTGGTTGGCTGAAAGAAAGTAATCTCAATACTGCCAAATTAAGGAAGGTGGCTTTGCTGAAACACTTTGCATTTTAAAATTGCCGATATGTTTGCACATAAATTATGCTCTTTCTAGTAGATTCTCCATTCTCATTATTTATTTGGTTGTAGATGCTTTAACTAATCCTAGCCACTTTGTATATTATATTTAAAAACCTGATCAAGATCCACCAATTATCTTTAACTTTGAAAAATAAGGAATAAAGAATGCAGCAACTTATCGAATCCTTCGACAGAGGAAAGGAATATCGGCCTCCAATTGACACAAACGAAGAACAAACTAAGGAACAGAAAAGAAAACGAAACAAAACAAAGCACAGCAAAGCTGTAGAAACATAGAACTTTGGATGAAGCCAGCCAATTAGGAACAGATGTATTGTCCTAAATCCGGCTTGAAAATTGTCCTTTACCATGCAAATAATATCCTGTTTTTTGCCTTTCGTAGGTTTGTCTTAGTTGGTTGTCTAATTTTCCACATGTTGGTTGTATAAGCTTAAGTTATGGGCTGTCTCTCACTCTCTCTCTCTCTGAATCTTATTGGCTCTCTTGTCCATAGTTTGCTTTGGACATAATATTGAAAAGAATTCAAAAAGATAAGAAAATGTGCTTTATATGATACGATTCATGTTGGGTGGAGTGACAATGCCATCAAAGCACAACCCTTTTAAGTTCAACTCAAAACCTTCAAATGGAAGAATGAAACACGCATATTAATCAAAGCCCTACCTGTTGTTTCCCTATATCATTGCTGTTAAAACACTATTCACTTGGGGGCCAAAAGTAAAACACACACACATAAAAAAATAAATAAAGAAATAAAGAAATCTCTCAGAATAAAATCTTTTAGAATCTGCTTCAATAAGACTGATTTTTGAAAATCCTACAAAAGGACTGAGAGTGGGGTAAAATTTTCAGCCAATTACTTTCCTGTCCCACATTCCTACCGACTAAAGAAGTTGAGTTTATAACCTTTTCTTTTTGTTAGTCATGATATTTTTTTTTGGGTAATAACCAATAGAAGGTTAAAAAAAAAAGGAGGGAGAAAAAGTAATGCATACAGAAAAAGGAGTGGAAAGTAGAAACTGGGTTGCTTTTGTTTTAGCCCAAG

mRNA sequence

AGTGTTCATGTTTCTTTAGTTTTGCCGCCATTTCAACTGCTTACCCTTTACCTGATCAACCATTCTAGGGTTTCGTATTTGGCGGGAAAGCAAAGAACCAACCAGCGACATAGCATGATTTGGCAGAGAGATTGAAGTTGATAGAATGGCGAACAGATTAATTAATCAGATGGGATTACCCAGATCGATTGCCAACATTTTCGCTGCGCGAAATATTAACACAGCTAAGGAAGCTTTATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGATGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATTGCTTCTCCACCTTATCAGACCGTTCTTTCTCTGATGGAGCAAAGACTTCAAAACGAACATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGAATACCATTTGGTGTCTTGACAGAACTTGTTGGTCCAGCTGGAATTGGCAAAACACAATTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTACCATCAAGCTACGGAGGTTTGGATGGCCGTGTAATATATATTGACGTAGAATCTAAGTTTAGTTCCAGAAGGATGATTGAAATTGGTATGAGAAGCTTTCCTGATGTATTTCACAAGAAAGACATGGCACAAGAGATGGCTGGTAGGATCCTTGTTTTGCGGCCTGCATCACTTTCCGAATTCACTGAGAGTTTGCACAAAATCAAGGTTTCACTTCTTGAGCAAGAAGTAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGGAGTATGAGCAAGGGGTACCCAAACAGCATTCATTGGGTTGGCATATTTCGTTTATCAAGTCAATTGCTGAGTTTGCACGAATTCCAGTAGTTGTGACGAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGGAGTGCAACTCAAGAATGTTCTCCAGAATATGATTCTCATCTTGTTGCTGCCTTGGGTGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCATGATAACCTCATCTGGAATTTCATTGCTGAGCGACAAGGGAAAAGAACTGAGTGGAGCAGCAATCAACGAGATTCTCTGTCAAGGACAGAGTGATATTATCAGCAATCATTTTGCAAAGCAGCAGTGACCATTGCCACTTAAATGCAAATGAGACTGCTAAAATTTCAAGCTTCTCATGCAATGTATAGGTGGCTTCCGGTTGTTAATGGACATGCTTACAGGATAGCTTAGAACTAAACCAGCAGAGCATGGAAGATGGAAGCGATACCCAAGCTGCGGATGATTTTTCTTGAGAGGAATTGCCTACCTTAGTTTCTTTAGTGATAACAATTAGTGGAAAGTACAGGCAGGACTTTGTTTCTCAGTGATAAAAATGTTTAGAAAGTACTGGTAGGACATCATTTTGGTTCATTAATATGCTAGGACAAGGTTGCCAGGAATTTGATCGTCCTTCGGCCAAGCTCCTAACTGAAAACAAAAGCGGGCACCTGTGATGTGCTAGCATTGTGGTTTGGCCCACCCTTTCTTTGATCCTTGTAACGGTGCATCGGGACTTATGCCTATATGCTATATCCATTGAAGCTCTATAGGTGGTGACTACACATTTAGAGAATGAATCTTGCATTATTTAGCAAAAAATATGATGATGCATCAAATCCATGTACTGGACTAAAGTTACAAAGATTCCATAGACCACTTTTGGAACCCTTGGAACTCAATCACTATCAAAACCATGGAATTTGTGTTATGTTCTAAACATGGAGAATACAAATTTCTATGTGACTAATACATTTTATGGTGACGTGAGTATTTCATCGTTCCAAACTTTCAAGTACAGCAAGCTTGGGAAGGAAAAAAATCGAGTTAACCTGAAGGTTTTCAATGAAGGAAGATGGCTTGCTGGAAGATAGAGCGAGTTCTCCTGAACCTGTTTTTGGGCATTTTGTGCAAGTGGTTGGCTGAAAGAAAGTAATCTCAATACTGCCAAATTAAGGAAGGTGGCTTTGCTGAAACACTTTGCATTTTAAAATTGCCGATATGTTTGCACATAAATTATGCTCTTTCTAGTAGATTCTCCATTCTCATTATTTATTTGGTTGTAGATGCTTTAACTAATCCTAGCCACTTTGTATATTATATTTAAAAACCTGATCAAGATCCACCAATTATCTTTAACTTTGAAAAATAAGGAATAAAGAATGCAGCAACTTATCGAATCCTTCGACAGAGGAAAGGAATATCGGCCTCCAATTGACACAAACGAAGAACAAACTAAGGAACAGAAAAGAAAACGAAACAAAACAAAGCACAGCAAAGCTGTAGAAACATAGAACTTTGGATGAAGCCAGCCAATTAGGAACAGATGTATTGTCCTAAATCCGGCTTGAAAATTGTCCTTTACCATGCAAATAATATCCTGTTTTTTGCCTTTCGTAGGTTTGTCTTAGTTGGTTGTCTAATTTTCCACATGTTGGTTGTATAAGCTTAAGTTATGGGCTGTCTCTCACTCTCTCTCTCTCTGAATCTTATTGGCTCTCTTGTCCATAGTTTGCTTTGGACATAATATTGAAAAGAATTCAAAAAGATAAGAAAATGTGCTTTATATGATACGATTCATGTTGGGTGGAGTGACAATGCCATCAAAGCACAACCCTTTTAAGTTCAACTCAAAACCTTCAAATGGAAGAATGAAACACGCATATTAATCAAAGCCCTACCTGTTGTTTCCCTATATCATTGCTGTTAAAACACTATTCACTTGGGGGCCAAAAGTAAAACACACACACATAAAAAAATAAATAAAGAAATAAAGAAATCTCTCAGAATAAAATCTTTTAGAATCTGCTTCAATAAGACTGATTTTTGAAAATCCTACAAAAGGACTGAGAGTGGGGTAAAATTTTCAGCCAATTACTTTCCTGTCCCACATTCCTACCGACTAAAGAAGTTGAGTTTATAACCTTTTCTTTTTGTTAGTCATGATATTTTTTTTTGGGTAATAACCAATAGAAGGTTAAAAAAAAAAGGAGGGAGAAAAAGTAATGCATACAGAAAAAGGAGTGGAAAGTAGAAACTGGGTTGCTTTTGTTTTAGCCCAAG

Coding sequence (CDS)

ATGGCGAACAGATTAATTAATCAGATGGGATTACCCAGATCGATTGCCAACATTTTCGCTGCGCGAAATATTAACACAGCTAAGGAAGCTTTATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGATGTGGGATTGTCGGAAGTTGCATCTGCAGTTGCACACATTAGTGAAATTGCTTCTCCACCTTATCAGACCGTTCTTTCTCTGATGGAGCAAAGACTTCAAAACGAACATTTAGCTGGCCATCTTTCCACATGTTTAAAAGGTTTAGATGAGGCCTTATTTGGTGGAATACCATTTGGTGTCTTGACAGAACTTGTTGGTCCAGCTGGAATTGGCAAAACACAATTTTGCTTGAAACTCTCTTTCTTAGCTGCTCTACCATCAAGCTACGGAGGTTTGGATGGCCGTGTAATATATATTGACGTAGAATCTAAGTTTAGTTCCAGAAGGATGATTGAAATTGGTATGAGAAGCTTTCCTGATGTATTTCACAAGAAAGACATGGCACAAGAGATGGCTGGTAGGATCCTTGTTTTGCGGCCTGCATCACTTTCCGAATTCACTGAGAGTTTGCACAAAATCAAGGTTTCACTTCTTGAGCAAGAAGTAAAGCTAGTAATCATTGATAGCATGGCTGCTCTTATTACTGGGGAGTATGAGCAAGGGGTACCCAAACAGCATTCATTGGGTTGGCATATTTCGTTTATCAAGTCAATTGCTGAGTTTGCACGAATTCCAGTAGTTGTGACGAACCAAGTAAGATCCCGGAACAGGAATGAGGTCTCCCATTATTCTTTTCAAGGATTGAGCAGGAGTGCAACTCAAGAATGTTCTCCAGAATATGATTCTCATCTTGTTGCTGCCTTGGGTGTTCATTGGGCTCATTCTGTGACAATCCGTTTGGTGCTTGAAGCAAAATCTGGTCAGAGGTTTATAAAGCTTGCAAAGTCTCCCATGTCTCCACCTCTAGCTTTCCCATTCATGATAACCTCATCTGGAATTTCATTGCTGAGCGACAAGGGAAAAGAACTGAGTGGAGCAGCAATCAACGAGATTCTCTGTCAAGGACAGAGTGATATTATCAGCAATCATTTTGCAAAGCAGCAGTGA

Protein sequence

MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQSDIISNHFAKQQ

Homology

[Close]

BLAST of CcUC02G038440 vs. NCBI nr
Match: XP_038901703.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901704.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901705.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901707.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901708.1 DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 683.3 bits (1762), Expect = 1.1e-192
Identity = 355/371 (95.69%), Postives = 357/371 (96.23%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFEL+ELLDVGLSEVASAVA ISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELIELLDVGLSEVASAVALISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIPVVVTNQVRSRNRNEVSHYSFQG SRS T ECSP YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGWSRSETHECSPGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMIT SGISLLSD G+ELSGAAINEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITPSGISLLSDNGEELSGAAINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIISNH  K Q
Sbjct: 361 DIISNHLGKHQ 371

[Close]

BLAST of CcUC02G038440 vs. NCBI nr
Match: XP_022943309.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943311.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943312.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_023511983.1 DNA repair protein RAD51 homolog 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671.0 bits (1730), Expect = 5.9e-189
Identity = 349/371 (94.07%), Postives = 353/371 (95.15%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQGLS S  QECS  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISLLSD GKELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIIS    KQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CcUC02G038440 vs. NCBI nr
Match: XP_022986663.1 (DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986665.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 667.9 bits (1722), Expect = 5.0e-188
Identity = 348/371 (93.80%), Postives = 352/371 (94.88%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGL GRVIYIDVE KFSSRRMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQGLS S  QECS  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISLLSD GKELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIIS    KQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CcUC02G038440 vs. NCBI nr
Match: KAG6570753.1 (DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 667.2 bits (1720), Expect = 8.5e-188
Identity = 346/371 (93.26%), Postives = 353/371 (95.15%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISE+A
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEVA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHL+GHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLSGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAAL  SYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVF K+DMA+EMAGRILV
Sbjct: 121 KLSFLAALLPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKEDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQGLS S  QECS  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISLLSD GKELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIIS    KQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CcUC02G038440 vs. NCBI nr
Match: XP_038901711.1 (DNA repair protein RAD51 homolog 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 665.6 bits (1716), Expect = 2.5e-187
Identity = 346/358 (96.65%), Postives = 348/358 (97.21%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFEL+ELLDVGLSEVASAVA ISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELIELLDVGLSEVASAVALISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIPVVVTNQVRSRNRNEVSHYSFQG SRS T ECSP YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGWSRSETHECSPGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQG 359
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMIT SGISLLSD G+ELSGAAINEI CQG
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITPSGISLLSDNGEELSGAAINEIHCQG 358

[Close]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot
Match: Q9SK02 (DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=2 SV=2)

HSP 1 Score: 498.4 bits (1282), Expect = 6.8e-140
Identity = 249/366 (68.03%), Postives = 306/366 (83.61%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KL+  A+ P +YGGLDGRVIYIDVESKFSSRR+IE+G+ SFP+VFH K MAQEMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ +VKL++IDSM AL++GE + G  +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           +AEF+RIP+VVTNQVRS+NR+E S YSFQ   +   ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSD G EL G  IN I  +G S
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHS 360

Query: 361 DIISNH 367
           D+I+ H
Sbjct: 361 DMINFH 366

[Close]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot
Match: O15315 (DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-46
Identity = 121/368 (32.88%), Postives = 198/368 (53.80%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           M ++ + ++GL + + +  +   I T ++ L L+  ELM++  +    V   +  +S   
Sbjct: 1   MGSKKLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRAC 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           +P  QT   +  QR   +     LST L  LDEAL GG+  G LTE+ GP G GKTQFC+
Sbjct: 61  APKMQTAYGIKAQR-SADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCI 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
            +S LA LP++ GGL+G V+YID ES FS+ R++EI    FP  F+ ++     + ++ +
Sbjct: 121 MMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHL 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYE---QGVPKQHS--LGWHI 240
            R  +  E  + +  ++  ++ + +KLVI+DS+A+++  E++   QG  K+ +  L    
Sbjct: 181 YRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREA 240

Query: 241 SFIKSIAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYD----------S 300
           S +K +AE   IPV++TNQ+        +H S  G   S     SP  D          S
Sbjct: 241 SSLKYLAEEFSIPVILTNQI-------TTHLS--GALASQADLVSPADDLSLSEGTSGSS 300

Query: 301 HLVAALGVHWAHSVTIRLVLE-AKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGK 353
            ++AALG  W+HSV  RL+L+   S +R I +AKSP++P  +F + I   G+ L      
Sbjct: 301 CVIAALGNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFTSFVYTIKEEGLVLQETTFC 358

[Close]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot
Match: O35719 (DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-45
Identity = 124/355 (34.93%), Postives = 193/355 (54.37%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           M+++ + ++GL   + +  +   I   +  LSL+  ELM++  +    V   +  +S+  
Sbjct: 1   MSSKKLRRVGLSPELCDRLSRYQIVNCQHFLSLSPLELMKVTGLSYRGVHELLHTVSKAC 60

Query: 61  SPPYQTVLSLMEQRLQNEHLA-GHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFC 120
           +P  QT   L  +R  + HL+   LST L  LDEAL GG+P G LTE+ GP G GKTQFC
Sbjct: 61  APQMQTAYELKTRR--SAHLSPAFLSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFC 120

Query: 121 LKLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRIL 180
           + +S LA LP+S GGL+G V+YID ES F++ R++EI    FP  F+ ++     + R+ 
Sbjct: 121 IMMSVLATLPTSLGGLEGAVVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVH 180

Query: 181 VLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYE---QGVPKQHS--LGWH 240
           + R  +     + L  ++  ++ + VKLVI+DS+A+++  E++   QG  K+ +  LG  
Sbjct: 181 LCRELTCEGLLQRLESLEEEIISKGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKG 240

Query: 241 ISFIKSIAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYD---------- 300
            S +K +A    IPV++TNQ+        +H S  G   S     SP  D          
Sbjct: 241 ASLLKYLAGEFSIPVILTNQI-------TTHLS--GALPSQADLVSPADDLSLSEGTSGS 300

Query: 301 SHLVAALGVHWAHSVTIRLVLE-AKSGQRFIKLAKSPMSPPLAFPFMITSSGISL 339
           S LVAALG  W H V  RL+L+   S +R I +AKSP++   +F + I   G+ L
Sbjct: 301 SCLVAALGNTWGHCVNTRLILQYLDSERRQILIAKSPLAAFTSFVYTIKGEGLVL 344

[Close]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot
Match: Q74MX9 (DNA repair and recombination protein RadA OS=Nanoarchaeum equitans (strain Kin4-M) OX=228908 GN=radA PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.4e-23
Identity = 99/338 (29.29%), Postives = 155/338 (45.86%), Query Frame = 0


Query: 12  PRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAV-AHISEIASPPYQTVLSL 71
           P++   + +A   +  K A +  E ELME  D+G +     + A +  +    ++T   +
Sbjct: 21  PKTAEKLISAGYDSLIKIASASVE-ELMEAADIGEATARKIIEAAMERLGLLEFKTAEEV 80

Query: 72  MEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPS 131
           +E+R +       ++T  K LD  L GGI    LTE  G  G GKTQ   +L+    LP 
Sbjct: 81  LEERQK----TARITTMSKNLDSLLGGGIETAALTEFYGEYGSGKTQVGHQLAVDVQLPP 140

Query: 132 SYGGLDGRVIYIDVESKFSSRRMIEIG-------MRSFPDVFHKKDMAQEMAGRILVLRP 191
             GGL+G+ +YID E  F   R+ ++         ++  +V+H K    +   ++L  R 
Sbjct: 141 EQGGLEGKAVYIDTEGTFRPERIKQMAEALDLDPKKALKNVYHMKVFNTD--HQMLAARK 200

Query: 192 ASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYE---QGVPKQHSLGWHISFIKS 251
           A      E + K       + +KL+++DS+ AL   EY    Q   +QH LG H+  +  
Sbjct: 201 AE-----ELIRK------GEPIKLIVVDSLTALFRAEYTGRGQLAERQHKLGRHVHDLLR 260

Query: 252 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVH-WAHSV 311
           IAE   + + VTNQV ++  + +                 P  DS  V A+G H  AH+ 
Sbjct: 261 IAELYNVAIYVTNQVMAKPDSFI-----------------PGLDS--VQAVGGHVLAHAS 320

Query: 312 TIRLVL-EAKSGQRFIKLAKSPMSPPLAFPFMITSSGI 337
           T R+ L + K G R  +L  SP  P     F+IT  GI
Sbjct: 321 TYRVFLRKGKKGIRIARLVDSPHLPERETTFVITEEGI 321

[Close]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot
Match: Q2NE95 (DNA repair and recombination protein RadA OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) OX=339860 GN=radA PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.9e-22
Identity = 88/310 (28.39%), Postives = 141/310 (45.48%), Query Frame = 0


Query: 34  TEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDE 93
           T  EL   +++G    A  +    +     ++T   +ME+R       G ++T  KGLDE
Sbjct: 33  TPKELSVKVEIGEGVAAKVIEAARKAEKIDFETAFEVMERRED----VGRITTGSKGLDE 92

Query: 94  ALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPSSYGGLDGRVIYIDVESKFSSRRM 153
            + GGI    +TE+ G  G GK+Q   +LS    LP   GGLDG V++ID E+ F   R+
Sbjct: 93  LIGGGIETQSITEVYGEFGSGKSQISHELSVTTQLPVEEGGLDGEVVFIDTENTFRPERI 152

Query: 154 IEIGM---RSFPDVFHKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVII 213
            +I      +  +V  K  +A+       +L    ++E  +S            +KL+II
Sbjct: 153 EQIAEGFGLNIEEVLKKIHVARAFNSSHQILMADKINELIQS---------GVNIKLIII 212

Query: 214 DSMAALITGEY---EQGVPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRNEVSHYS 273
           DS+ A    EY   E    +Q  L  H+  +++IA    + V++TNQV+S+        S
Sbjct: 213 DSLMAHFRAEYVGRESLATRQQKLNQHLHTLQTIANTYNVAVLITNQVQSKPD------S 272

Query: 274 FQGLSRSATQECSPEYDSHLVAALGVHWAHSVTIRLVL-EAKSGQRFIKLAKSPMSPPLA 333
           F G    A          H++        H+ T R++L +  SG+R  +L  SP  P   
Sbjct: 273 FFGTPTKAV-------GGHVL-------GHASTYRILLKKGLSGKRIARLVDSPHLPEGE 309

Query: 334 FPFMITSSGI 337
             F +T+ G+
Sbjct: 333 SVFKVTTEGL 309

[Close]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1FTX6 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448118 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.8e-189
Identity = 349/371 (94.07%), Postives = 353/371 (95.15%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVESKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQGLS S  QECS  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSSSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISLLSD GKELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIIS    KQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1JH72 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484351 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 2.4e-188
Identity = 348/371 (93.80%), Postives = 352/371 (94.88%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANKLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGL GRVIYIDVE KFSSRRMIEIGMRSFPDVF KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLAGRVIYIDVEYKFSSRRMIEIGMRSFPDVFQKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQE+KLVIIDSMAALITGEYEQG PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEIKLVIIDSMAALITGEYEQGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQGLS S  QECS  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQGLSCSEIQECSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF ITSSGISLLSD GKELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFSITSSGISLLSDNGKELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIIS    KQQ
Sbjct: 361 DIISYQLGKQQ 371

[Close]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL
Match: A0A0A0KFZ1 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.3e-186
Identity = 345/371 (92.99%), Postives = 351/371 (94.61%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGLDGRVIYIDVESKFSS+RMIEIGMRSFPDVF+KKDMAQEMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSKRMIEIGMRSFPDVFNKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYE G PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIPVVVTNQVRSRNR EVSHYSFQG SRS  QE S  Y SH+VAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQEYSSGYGSHIVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF IT+SGISLLS+ G+ELSGA INEI CQG S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DIISNH  K Q
Sbjct: 361 DIISNHLGKHQ 371

[Close]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL
Match: A0A1S3CKQ5 (DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501904 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 342/371 (92.18%), Postives = 350/371 (94.34%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLS+VASAVAHISEIA
Sbjct: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSDVASAVAHISEIA 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQT LSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTALSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLSFLAALP SYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVF+KKDMA+EMAGRILV
Sbjct: 121 KLSFLAALPPSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFNKKDMAKEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYE G PKQHSLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYELGAPKQHSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIPVVVTNQVRSRNR EVSHYSFQG SRS +QE S  YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPVVVTNQVRSRNRKEVSHYSFQGRSRSESQEYSSGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLE KSGQRFIKLAKSPMSPPLAFPF IT SG+SLL++ G+ELSGA INEI CQG S
Sbjct: 301 IRLVLEVKSGQRFIKLAKSPMSPPLAFPFTITPSGVSLLTNNGEELSGAEINEIHCQGHS 360

Query: 361 DIISNHFAKQQ 372
           DII NH  K Q
Sbjct: 361 DIIINHLGKHQ 371

[Close]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL
Match: A0A6J1CY45 (DNA repair protein RAD51 homolog 2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015517 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.1e-184
Identity = 341/371 (91.91%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LI+QMGLPRSIANIFAARNI TAKEALSLTEFEL+ELLDVGLSEVA AVAHISEI 
Sbjct: 1   MANKLISQMGLPRSIANIFAARNITTAKEALSLTEFELLELLDVGLSEVAFAVAHISEIT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL
Sbjct: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KLS LAALP SYGGL GRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV
Sbjct: 121 KLSLLAALPPSYGGLGGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRPASLSEFTESL KIKVSLLEQEVKLVIIDSMAALITGEYEQG P Q+SLGWHISFIKS
Sbjct: 181 LRPASLSEFTESLQKIKVSLLEQEVKLVIIDSMAALITGEYEQGAPIQNSLGWHISFIKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           IAEFARIP+VVTNQVRSRNRNEVSHYSFQ LS S  Q CSP YDSHLVAALGVHWAHSVT
Sbjct: 241 IAEFARIPIVVTNQVRSRNRNEVSHYSFQELSSSGAQGCSPGYDSHLVAALGVHWAHSVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQRFIKLAKSPMSPPLAFPF+ITSSGISLLSD GKELSG  INEI CQ  S
Sbjct: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFIITSSGISLLSDSGKELSGTEINEIHCQAYS 360

Query: 361 DIISNHFAKQQ 372
           DIISNH+  QQ
Sbjct: 361 DIISNHWENQQ 371

[Close]

BLAST of CcUC02G038440 vs. TAIR 10
Match: AT2G28560.2 (DNA repair (Rad51) family protein )

HSP 1 Score: 498.4 bits (1282), Expect = 4.9e-141
Identity = 249/366 (68.03%), Postives = 306/366 (83.61%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KL+  A+ P +YGGLDGRVIYIDVESKFSSRR+IE+G+ SFP+VFH K MAQEMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ +VKL++IDSM AL++GE + G  +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           +AEF+RIP+VVTNQVRS+NR+E S YSFQ   +   ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSD G EL G  IN I  +G S
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHS 360

Query: 361 DIISNH 367
           D+I+ H
Sbjct: 361 DMINFH 366

[Close]

BLAST of CcUC02G038440 vs. TAIR 10
Match: AT2G28560.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 490.3 bits (1261), Expect = 1.3e-138
Identity = 246/361 (68.14%), Postives = 301/361 (83.38%), Query Frame = 0


Query: 1   MANRLINQMGLPRSIANIFAARNINTAKEALSLTEFELMELLDVGLSEVASAVAHISEIA 60
           MAN+LI +MGL   I+NIFAARNI TAK+ALS+TEFELMELLDVG+ E+ SA++ ISE  
Sbjct: 1   MANKLIGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEAT 60

Query: 61  SPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCL 120
           SPP Q+  SL+E++++NEHL+GHL T LKGLD+ L GGIPFGVLTELVGP GIGK+QFC+
Sbjct: 61  SPPCQSARSLLEKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCM 120

Query: 121 KLSFLAALPSSYGGLDGRVIYIDVESKFSSRRMIEIGMRSFPDVFHKKDMAQEMAGRILV 180
           KL+  A+ P +YGGLDGRVIYIDVESKFSSRR+IE+G+ SFP+VFH K MAQEMAGRILV
Sbjct: 121 KLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEVFHLKGMAQEMAGRILV 180

Query: 181 LRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALITGEYEQGVPKQHSLGWHISFIKS 240
           LRP SL+ FTES+ ++K S+L+ +VKL++IDSM AL++GE + G  +Q  LGWHISF+KS
Sbjct: 181 LRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKS 240

Query: 241 IAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSVT 300
           +AEF+RIP+VVTNQVRS+NR+E S YSFQ   +   ++ +  YDSHLVAALG++WAH+VT
Sbjct: 241 LAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAHAVT 300

Query: 301 IRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKELSGAAINEILCQGQS 360
           IRLVLEAKSGQR IK+AKSPMSPPLAFPF ITS+GISLLSD G EL G  IN I  +G  
Sbjct: 301 IRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGIV 360

Query: 361 D 362
           D
Sbjct: 361 D 361

[Close]

BLAST of CcUC02G038440 vs. TAIR 10
Match: AT2G28560.3 (DNA repair (Rad51) family protein )

HSP 1 Score: 458.0 bits (1177), Expect = 7.3e-129
Identity = 226/334 (67.66%), Postives = 279/334 (83.53%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLD 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+  SL+E++++NEHL+GHL T LKGLD
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLLEKKVENEHLSGHLPTHLKGLD 60

Query: 93  EALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPSSYGGLDGRVIYIDVESKFSSRR 152
           + L GGIPFGVLTELVGP GIGK+QFC+KL+  A+ P +YGGLDGRVIYIDVESKFSSRR
Sbjct: 61  DTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRR 120

Query: 153 MIEIGMRSFPDVFHKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDS 212
           +IE+G+ SFP+VFH K MAQEMAGRILVLRP SL+ FTES+ ++K S+L+ +VKL++IDS
Sbjct: 121 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDS 180

Query: 213 MAALITGEYEQGVPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRNEVSHYSFQGLS 272
           M AL++GE + G  +Q  LGWHISF+KS+AEF+RIP+VVTNQVRS+NR+E S YSFQ   
Sbjct: 181 MTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKV 240

Query: 273 RSATQECSPEYDSHLVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFMIT 332
           +   ++ +  YDSHLVAALG++WAH+VTIRLVLEAKSGQR IK+AKSPMSPPLAFPF IT
Sbjct: 241 KDEFKDNTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHIT 300

Query: 333 SSGISLLSDKGKELSGAAINEILCQGQSDIISNH 367
           S+GISLLSD G EL G  IN I  +G SD+I+ H
Sbjct: 301 SAGISLLSDNGTELKGPGINTIHARGHSDMINFH 334

[Close]

BLAST of CcUC02G038440 vs. TAIR 10
Match: AT2G28560.4 (DNA repair (Rad51) family protein )

HSP 1 Score: 336.3 bits (861), Expect = 3.2e-92
Identity = 162/237 (68.35%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 33  LTEFELMELLDVGLSEVASAVAHISEIASPPYQTVLSLMEQRLQNEHLAGHLSTCLKGLD 92
           +TEFELMELLDVG+ E+ SA++ ISE  SPP Q+  SL+E++++NEHL+GHL T LKGLD
Sbjct: 1   MTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLLEKKVENEHLSGHLPTHLKGLD 60

Query: 93  EALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPSSYGGLDGRVIYIDVESKFSSRR 152
           + L GGIPFGVLTELVGP GIGK+QFC+KL+  A+ P +YGGLDGRVIYIDVESKFSSRR
Sbjct: 61  DTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYIDVESKFSSRR 120

Query: 153 MIEIGMRSFPDVFHKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDS 212
           +IE+G+ SFP+VFH K MAQEMAGRILVLRP SL+ FTES+ ++K S+L+ +VKL++IDS
Sbjct: 121 VIEMGLESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDS 180

Query: 213 MAALITGEYEQGVPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRNEVSHYSFQ 270
           M AL++GE + G  +Q  LGWHISF+KS+AEF+RIP+VVTNQVRS+NR+E S YSFQ
Sbjct: 181 MTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQ 237

[Close]

BLAST of CcUC02G038440 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-21
Identity = 82/287 (28.57%), Postives = 129/287 (44.95%), Query Frame = 0


Query: 75  LQNEHLAGHLSTCLKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPSSYGG 134
           L  E     ++T    LD  L GGI    +TE+ G  GIGKTQ  ++LS    +P   GG
Sbjct: 120 LHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGG 179

Query: 135 LDGRVIYIDVESKFSSRRMIEIG------MRSFPDVFHKKDMA-------QEMAGRILVL 194
           L G+ IYID E  F   R ++I       M  +    HK   A       +++   I   
Sbjct: 180 LGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYF 239

Query: 195 RPASLSEFTESLHKIKVSLLE-QEVKLVIIDSMAALITGEYEQGVPKQHSLG-WHISFIK 254
           R  S +E    ++ ++  + E ++VK+VI+DS+      +Y+    +   L    + F+K
Sbjct: 240 RVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMK 299

Query: 255 SIAEFARIPVVVTNQVRSRNRNEVSHYSFQGLSRSATQECSPEYDSHLVAALGVHWAHSV 314
              +F+ + VV+ NQV ++     S  SFQ                 L  ALG  W+HS 
Sbjct: 300 LAKKFS-LAVVLLNQVTTK----FSEGSFQ-----------------LALALGDSWSHSC 359

Query: 315 TIRLVLEAKSGQRFIKLAKSPMSPPLAFPFMITSSGISLLSDKGKEL 347
           T R++L     +R+  + KSP  P  +  + +TS G+   S   K +
Sbjct: 360 TNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRV 384

The following BLAST results are available for this feature:

BLAST of CcUC02G038440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901703.1	1.1e-192	95.69	DNA repair protein RAD51 homolog 2 isoform X1 [Benincasa hispida] >XP_038901704....	[more]
XP_022943309.1	5.9e-189	94.07	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita moschata] >XP_022943310...	[more]
XP_022986663.1	5.0e-188	93.80	DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima] >XP_022986664.1...	[more]
KAG6570753.1	8.5e-188	93.26	DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038901711.1	2.5e-187	96.65	DNA repair protein RAD51 homolog 2 isoform X3 [Benincasa hispida]	[more]

BLAST of CcUC02G038440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK02	6.8e-140	68.03	DNA repair protein RAD51 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=RAD51B PE=...	[more]
O15315	2.0e-46	32.88	DNA repair protein RAD51 homolog 2 OS=Homo sapiens OX=9606 GN=RAD51B PE=1 SV=2	[more]
O35719	4.9e-45	34.93	DNA repair protein RAD51 homolog 2 OS=Mus musculus OX=10090 GN=Rad51b PE=2 SV=2	[more]
Q74MX9	2.4e-23	29.29	DNA repair and recombination protein RadA OS=Nanoarchaeum equitans (strain Kin4-...	[more]
Q2NE95	9.9e-22	28.39	DNA repair and recombination protein RadA OS=Methanosphaera stadtmanae (strain A...	[more]

BLAST of CcUC02G038440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTX6	2.8e-189	94.07	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JH72	2.4e-188	93.80	DNA repair protein RAD51 homolog 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KFZ1	1.3e-186	92.99	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G296460 PE=4...	[more]
A0A1S3CKQ5	1.5e-185	92.18	DNA repair protein RAD51 homolog 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1CY45	2.1e-184	91.91	DNA repair protein RAD51 homolog 2 isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of CcUC02G038440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28560.2	4.9e-141	68.03	DNA repair (Rad51) family protein	[more]
AT2G28560.1	1.3e-138	68.14	DNA repair (Rad51) family protein	[more]
AT2G28560.3	7.3e-129	67.66	DNA repair (Rad51) family protein	[more]
AT2G28560.4	3.2e-92	68.35	DNA repair (Rad51) family protein	[more]
AT2G45280.2	1.7e-21	28.57	RAS associated with diabetes protein 51C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 101..302 e-value: 0.0016 score: 27.7
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 83..337 e-value: 1.5E-38 score: 132.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 64..337 e-value: 3.0E-58 score: 199.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 83..339
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 2..342 e-value: 3.7E-55 score: 185.1
IPR030548	DNA repair protein RAD51 homologue 2	PANTHER	PTHR46456	DNA REPAIR PROTEIN RAD51 HOMOLOG 2	coord: 1..365
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 80..255 score: 38.603958

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G038440.1	CcUC02G038440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding