CcUC02G038070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G038070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like
Location	CicolChr02: 33500240 .. 33501985 (-)
RNA-Seq Expression	CcUC02G038070
Synteny	CcUC02G038070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCCATTAATCACATAGCTTCAAATTACGTAATTATCACCAATTCTTTCTCATGGGTCCCTCCCTTCTTCTGCTTCTTCTCCTTCTTCATAGTTCCTCCTTTCCTCTCTTTGCTTAAAAGCAAAATGTTTGCTCTCATTTCATCACCACATTTAATTCCTCTAAAGCTCTGAGATAGTGTCATTTCAATCCACAACATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCGGTTCGTTCAAGTTTTTGCCGTCGTCCGGTCGCCGGAGATGCGAACTCCGGCGATCGGAGAAAAGGGCAGCTTCATTTTGAGAATCACAGAAAGAGTACGAGCTGTTCCACTGTGAATCGAAAGGATATTAATGATTTACGAAGAAAAAGCTGTGCTGATGTTGATGATTTGAAGAGCCCTGTTTCTGGTTCCTCTGGTCGCTATCTTTTGAGTGATTCCCCGTTCCTTGACTGGTTTCCGGCGTCCTCCGGCGAGGAATTTTCGGCGCCGATGCCGGAGAAGAGGAAGATTATAAGCAATAGCTCGCAGAAATCTTCTTCGTTGACTCGCTCGTTGACTGTCCATGAATATCGTGGCCTCAGATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTCCAAAACATCTTCTTTAACTCACTCTCGTGAACAGGTTTTCTTATAATTAACCATTTTTCTTTTAGTTAAATTGCAAATTTGTAAATTTAGTTCTTATGCGAAAACTATATGGAGTGGTTATGAAGTTTTGTCGAACTATTTGACTAAATTTTAAGTTCTTAAATATTATAGGGACTAGATTTACCACTAAAACTTTTCTACTTCTTATCCATTCTTTATTTTTTTTGGATCAATAGGTAGTGGTTCTGAAGGTTTCATTGAACTGCAAAGGTTGCGAAAAGAAGGTGAAAAAGCATATTTCAAAGATGGAAGGTATAATTTTTGCACATTTTAAAGCTAAAAGGTTATAAATTTTTTTTGCTCAAATATCGATCTATACTAGTTGTATTAGTTAAAATTCTTAACTTTTGTTACGGTATCGACTTACTCTCTCATTCAAATTTCGTTTGATTGATATGGTGTGAATCTTATGATTTACAAAATTAAACTTCTCAATTCAATAACCTTTGAAAATCATACATGTATTGATTCTCAATCGTTTGTAGACCTCTTCAAATGTTGGTTTTACAAAGTAGATATTAAAGTAAATGCATGAACGATTCTTAAAAAAAATTTTGACGAAAAGTCTAAATTGATATATCAATGAAAGGTTTAGGGTTTTAGTTGATACAATTATAAGTTTCGCACGAGATTTACCCAAATGGAACGTAATAGAGGGTATGATACACTTACAAAAGTTCAAAATTTAAATTGATGCAATTGTTATTTTCCTAAATTCTTTTTCGGGTATGAATTTATGAAAATAGTGTTGATGATCATGCAGGAGTGACCTCATACAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATTTAACCCCTTTTGATGTCTTGGCCAGTGTGTCAAAAGTGAAGTATGCTCAGTTTTGGCCGTCACCAAACTCTTCTTCATCTTCATCTTCAACTCCACAATCCTCATCATCATCACTATCATCAACATTTTGATCAATGAAAATCAAATATTTTGCTACAAATATCCCATTTGGGGTTTGCTTGTACCATGCAGAAAAGTTGCAGAATTCATGGGTTTTCTTTTTTTTCC

mRNA sequence

GACCCCATTAATCACATAGCTTCAAATTACGTAATTATCACCAATTCTTTCTCATGGGTCCCTCCCTTCTTCTGCTTCTTCTCCTTCTTCATAGTTCCTCCTTTCCTCTCTTTGCTTAAAAGCAAAATGTTTGCTCTCATTTCATCACCACATTTAATTCCTCTAAAGCTCTGAGATAGTGTCATTTCAATCCACAACATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCGGTTCGTTCAAGTTTTTGCCGTCGTCCGGTCGCCGGAGATGCGAACTCCGGCGATCGGAGAAAAGGGCAGCTTCATTTTGAGAATCACAGAAAGAGTACGAGCTGTTCCACTGTGAATCGAAAGGATATTAATGATTTACGAAGAAAAAGCTGTGCTGATGTTGATGATTTGAAGAGCCCTGTTTCTGGTTCCTCTGGTCGCTATCTTTTGAGTGATTCCCCGTTCCTTGACTGGTTTCCGGCGTCCTCCGGCGAGGAATTTTCGGCGCCGATGCCGGAGAAGAGGAAGATTATAAGCAATAGCTCGCAGAAATCTTCTTCGTTGACTCGCTCGTTGACTGTCCATGAATATCGTGGCCTCAGATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTCCAAAACATCTTCTTTAACTCACTCTCGTGAACAGGTAGTGGTTCTGAAGGTTTCATTGAACTGCAAAGGTTGCGAAAAGAAGGTGAAAAAGCATATTTCAAAGATGGAAGGTATAATTTTTGCACATTTTAAAGCTAAAAGGGTTTTAGTTGATACAATTATAAGTTTCGCACGAGATTTACCCAAATGGAACGTAATAGAGGGAGTGACCTCATACAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATTTAACCCCTTTTGATGTCTTGGCCAGTGTGTCAAAAGTGAAGTATGCTCAGTTTTGGCCGTCACCAAACTCTTCTTCATCTTCATCTTCAACTCCACAATCCTCATCATCATCACTATCATCAACATTTTGATCAATGAAAATCAAATATTTTGCTACAAATATCCCATTTGGGGTTTGCTTGTACCATGCAGAAAAGTTGCAGAATTCATGGGTTTTCTTTTTTTTCC

Coding sequence (CDS)

ATGAAAAAACTAGACCTTTTTTGCAAATCTAGAGCTTCCACGGCGGTTCGTTCAAGTTTTTGCCGTCGTCCGGTCGCCGGAGATGCGAACTCCGGCGATCGGAGAAAAGGGCAGCTTCATTTTGAGAATCACAGAAAGAGTACGAGCTGTTCCACTGTGAATCGAAAGGATATTAATGATTTACGAAGAAAAAGCTGTGCTGATGTTGATGATTTGAAGAGCCCTGTTTCTGGTTCCTCTGGTCGCTATCTTTTGAGTGATTCCCCGTTCCTTGACTGGTTTCCGGCGTCCTCCGGCGAGGAATTTTCGGCGCCGATGCCGGAGAAGAGGAAGATTATAAGCAATAGCTCGCAGAAATCTTCTTCGTTGACTCGCTCGTTGACTGTCCATGAATATCGTGGCCTCAGATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTCCAAAACATCTTCTTTAACTCACTCTCGTGAACAGGTAGTGGTTCTGAAGGTTTCATTGAACTGCAAAGGTTGCGAAAAGAAGGTGAAAAAGCATATTTCAAAGATGGAAGGTATAATTTTTGCACATTTTAAAGCTAAAAGGGTTTTAGTTGATACAATTATAAGTTTCGCACGAGATTTACCCAAATGGAACGTAATAGAGGGAGTGACCTCATACAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATTTAACCCCTTTTGATGTCTTGGCCAGTGTGTCAAAAGTGAAGTATGCTCAGTTTTGGCCGTCACCAAACTCTTCTTCATCTTCATCTTCAACTCCACAATCCTCATCATCATCACTATCATCAACATTTTGA

Protein sequence

MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDINDLRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKSSSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWPSPNSSSSSSSTPQSSSSSLSSTF

Homology

[Close]

BLAST of CcUC02G038070 vs. NCBI nr
Match: XP_038901867.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.9e-107
Identity = 224/275 (81.45%), Postives = 233/275 (84.73%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLDLFCKSRASTAVRSSF RRPVAGDA+SGDRRKGQLHFENHRKSTSCSTVNRK++ND
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVAGDAHSGDRRKGQLHFENHRKSTSCSTVNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKSPVSGSS RYLL DSPFLDWFPA SGE+F APMPEKRKIISNSS+KS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEDFPAPMPEKRKIISNSSEKS 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
            SL+RSLTVHEYRGL+SPSSVLESPV KTSSLTHSR+QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 CSLSRSLTVHEYRGLKSPSSVLESPVLKTSSLTHSRDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGVTSYSVDFTTKKVTIIGDLTPFDVL
Sbjct: 181 KM-------------------------------EGVTSYSVDFTTKKVTIIGDLTPFDVL 240

Query: 241 ASVSKVKYAQFWPSPNSSSSSSSTPQSSSSSLSST 276
           ASVSKVKYAQFW SPN  SSSSSTPQSSSSS SS+
Sbjct: 241 ASVSKVKYAQFWQSPN--SSSSSTPQSSSSSSSSS 242

[Close]

BLAST of CcUC02G038070 vs. NCBI nr
Match: XP_004148220.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothetical protein Csa_023044 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 5.5e-99
Identity = 212/276 (76.81%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD+FCKSRASTAVRSSF RRP+ GDA+SGDRRKGQLHFENHRKSTSCST+NRK++ND
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKSPVSGSS RYLL DSPFLDWFPA SGEE  A MPEKRKIIS++SQKS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
             L RSLTV EY GL+SPSSVLESPV KT SLT SR+QVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 FLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGVTSYSVDFTTKKVTIIGD+TPFDVL
Sbjct: 181 KM-------------------------------EGVTSYSVDFTTKKVTIIGDITPFDVL 240

Query: 241 ASVSKVKYAQFWPSPNSSSSSSSTPQSSSSSLSSTF 277
           ASVSKVK AQFWPSPN  SSSSSTPQSSSS  SSTF
Sbjct: 241 ASVSKVKSAQFWPSPN--SSSSSTPQSSSS--SSTF 241

[Close]

BLAST of CcUC02G038070 vs. NCBI nr
Match: KAG6570732.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.8 bits (826), Expect = 2.9e-84
Identity = 193/275 (70.18%), Postives = 209/275 (76.00%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD FCKSRASTAVRSSF RRPV GDANSGDRRK QL FENHRKSTSCS+VNRKD  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKS VSGSS RYLLSDS F+DW PA SGE+F A  P++R +IS+     
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPKERNMISH----- 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
           SSLTRSLTVHEYRG +SPSSVL+SPV KT+S +   +QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 SSLTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGV+SYSVDFT KKVTIIG ++PFDVL
Sbjct: 181 KM-------------------------------EGVSSYSVDFTAKKVTIIGAVSPFDVL 238

Query: 241 ASVSKVKYAQFWPSPN----SSSSSSSTPQSSSSS 272
           ASVSKVKYAQFW SP+    SSSSSSSTPQS SSS
Sbjct: 241 ASVSKVKYAQFWTSPSSSSCSSSSSSSTPQSCSSS 238

[Close]

BLAST of CcUC02G038070 vs. NCBI nr
Match: XP_022986932.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 3.8e-84
Identity = 193/275 (70.18%), Postives = 208/275 (75.64%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD FCKSRASTAVRSSF RRPV GDANSGDRRK QL FENHRKSTSCS+VNRKD  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKS VSGSS RYLLSDS F+DW PA SGE+F A  P +R +IS+     
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISH----- 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
           SSLTRSLTVHEYRG +SPSSVL+SPV KT+S +   +QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 SSLTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGV+SYSVDFT KKVTIIG ++PFDVL
Sbjct: 181 KM-------------------------------EGVSSYSVDFTAKKVTIIGAVSPFDVL 238

Query: 241 ASVSKVKYAQFWPSPN----SSSSSSSTPQSSSSS 272
           ASVSKVKYAQFW SP+    SSSSSSSTPQS SSS
Sbjct: 241 ASVSKVKYAQFWTSPSSSSCSSSSSSSTPQSCSSS 238

[Close]

BLAST of CcUC02G038070 vs. NCBI nr
Match: KAG7010577.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-83
Identity = 192/275 (69.82%), Postives = 208/275 (75.64%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD FCKSRASTAVRSSF RRPV GDAN GDRRK QL FENHRKSTSCS+VNRKD  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANFGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKS VSGSS RYLLSDS F+DW PA SGE+F A  P++R +IS+     
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPKERNMISH----- 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
           SSLTRSLTVHEYRG +SPSSVL+SPV KT+S +   +QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 SSLTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGV+SYSVDFT KKVTIIG ++PFDVL
Sbjct: 181 KM-------------------------------EGVSSYSVDFTAKKVTIIGAVSPFDVL 238

Query: 241 ASVSKVKYAQFWPSPN----SSSSSSSTPQSSSSS 272
           ASVSKVKYAQFW SP+    SSSSSSSTPQS SSS
Sbjct: 241 ASVSKVKYAQFWTSPSSSSCSSSSSSSTPQSCSSS 238

[Close]

BLAST of CcUC02G038070 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 138 PSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRVLV 197
           P S   SP  K S    S +QVVVL+VSL+CKGC  KVKKH+SK                
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSK---------------- 293

Query: 198 DTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWP 254
                          ++GVTSY++DF  KKVT+ GD+TP  VLAS+SKVK AQFWP
Sbjct: 294 ---------------LKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of CcUC02G038070 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 143 ESPVSKTSSLTHSR-------EQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRV 202
           E+P  +  +LT  +       +QVVVLKVSL+C+GCE KV+KH+++M             
Sbjct: 159 EAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARM------------- 218

Query: 203 LVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWPSP 256
                             +GVTS+++DF  KKVT+ GD+TP ++L S+SKVK AQFW +P
Sbjct: 219 ------------------QGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 247

[Close]

BLAST of CcUC02G038070 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12
Identity = 50/125 (40.00%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 137 SPSSVLESPV-SKTSSLTHSREQVVVLKVSL--NCKGCEKKVKKHISKMEGIIFAHFKAK 196
           +P      PV  K  S     +QVVVL+VSL  +C+GC+ KVKKH+SKM           
Sbjct: 146 APKRGSSGPVEEKKKSSGSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKM----------- 205

Query: 197 RVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWP 256
                               +GVTS+++DF +KKVT+ GD+TP +VL  +SKVK AQFW 
Sbjct: 206 --------------------QGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNAQFWT 239

Query: 257 SPNSS 259
            P  S
Sbjct: 266 PPPPS 239

[Close]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL
Match: A0A0A0KG24 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.7e-99
Identity = 212/276 (76.81%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD+FCKSRASTAVRSSF RRP+ GDA+SGDRRKGQLHFENHRKSTSCST+NRK++ND
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKSPVSGSS RYLL DSPFLDWFPA SGEE  A MPEKRKIIS++SQKS
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
             L RSLTV EY GL+SPSSVLESPV KT SLT SR+QVVVLKVSLNC+GCEKKVKKHIS
Sbjct: 121 FLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGVTSYSVDFTTKKVTIIGD+TPFDVL
Sbjct: 181 KM-------------------------------EGVTSYSVDFTTKKVTIIGDITPFDVL 240

Query: 241 ASVSKVKYAQFWPSPNSSSSSSSTPQSSSSSLSSTF 277
           ASVSKVK AQFWPSPN  SSSSSTPQSSSS  SSTF
Sbjct: 241 ASVSKVKSAQFWPSPN--SSSSSTPQSSSS--SSTF 241

[Close]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL
Match: A0A6J1J8X9 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111484523 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.8e-84
Identity = 193/275 (70.18%), Postives = 208/275 (75.64%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD FCKSRASTAVRSSF RRPV GDANSGDRRK QL FENHRKSTSCS+VNRKD  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKS VSGSS RYLLSDS F+DW PA SGE+F A  P +R +IS+     
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISH----- 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
           SSLTRSLTVHEYRG +SPSSVL+SPV KT+S +   +QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 SSLTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGV+SYSVDFT KKVTIIG ++PFDVL
Sbjct: 181 KM-------------------------------EGVSSYSVDFTAKKVTIIGAVSPFDVL 238

Query: 241 ASVSKVKYAQFWPSPN----SSSSSSSTPQSSSSS 272
           ASVSKVKYAQFW SP+    SSSSSSSTPQS SSS
Sbjct: 241 ASVSKVKYAQFWTSPSSSSCSSSSSSSTPQSCSSS 238

[Close]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL
Match: A0A6J1D3S6 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017000 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.8e-83
Identity = 189/276 (68.48%), Postives = 204/276 (73.91%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MK LDLFCKSRASTAV SS  RRPVA    SG+RRKGQLHFE HRKSTSCS+ NRKD  +
Sbjct: 1   MKTLDLFCKSRASTAVCSSLDRRPVAARGYSGNRRKGQLHFEKHRKSTSCSSANRKDDFN 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
            RRKSCADVDDLKSP SGSS RYLL DSPF+DWFPA+SGE+F A  PE+R      +QKS
Sbjct: 61  FRRKSCADVDDLKSPASGSSARYLLGDSPFIDWFPAASGEDFPANPPEER------TQKS 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVL--ESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKH 180
           SSLTRSLT HEYRGL+SPSSVL  ESPV K+ S   SR QVVVLKVSLNCKGCEKKVKKH
Sbjct: 121 SSLTRSLTAHEYRGLKSPSSVLSHESPVLKSPSSAQSRHQVVVLKVSLNCKGCEKKVKKH 180

Query: 181 ISKMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFD 240
           ISKM                               EGVTSYSVDFTTKKVTIIG++TPF 
Sbjct: 181 ISKM-------------------------------EGVTSYSVDFTTKKVTIIGEVTPFG 239

Query: 241 VLASVSKVKYAQFWPSP---NSSSSSSSTPQSSSSS 272
           VL SVSKVK+AQ WPSP    SSSSSSSTP+SS+SS
Sbjct: 241 VLESVSKVKHAQLWPSPTSSTSSSSSSSTPKSSASS 239

[Close]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL
Match: A0A6J1FTK0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448670 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.3e-82
Identity = 191/276 (69.20%), Postives = 206/276 (74.64%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSCSTVNRKDIND 60
           MKKLD FCKSRASTAVRSSF RRPV GD NSGDRRK QL FENHRKSTSCS+VNRKD  D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDENSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQKS 120
           LRRKSCADVDDLKS VSGSS RYLLSDS F+DW PA SGE+F A  P +R +IS+     
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMISH----- 120

Query: 121 SSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHIS 180
           SSLTRSLTVHEYRG +SPSSVL+SPV KT+S +   +QVVVLKVSLNCKGCEKKVKKHIS
Sbjct: 121 SSLTRSLTVHEYRGQKSPSSVLQSPVLKTAS-SAVHDQVVVLKVSLNCKGCEKKVKKHIS 180

Query: 181 KMEGIIFAHFKAKRVLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVL 240
           KM                               EGV+SYSVDFT KKVTIIG ++PFDVL
Sbjct: 181 KM-------------------------------EGVSSYSVDFTAKKVTIIGAVSPFDVL 239

Query: 241 ASVSKVKYAQFW-----PSPNSSSSSSSTPQSSSSS 272
           ASVSKVKYAQFW      S +SSSSSSSTPQS SSS
Sbjct: 241 ASVSKVKYAQFWTSLSSSSCSSSSSSSSTPQSCSSS 239

[Close]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL
Match: A0A5A7V4V4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002500 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 8.0e-80
Identity = 160/184 (86.96%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDANSGDRRKGQLHFENHRKSTSC-STVNRKDIN 60
           MKKLDLFCKSRASTAVRSSF RRPV GDA+SGDRRKGQLHFENHRKSTSC STVNRK++N
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVTGDAHSGDRRKGQLHFENHRKSTSCSSTVNRKELN 60

Query: 61  DLRRKSCADVDDLKSPVSGSSGRYLLSDSPFLDWFPASSGEEFSAPMPEKRKIISNSSQK 120
           DLRRKSCAD DDLKSPVSGSS RYLL D+PFLDWFPA+SG+E  AP+PEKRKIIS++SQK
Sbjct: 61  DLRRKSCADADDLKSPVSGSSARYLLGDAPFLDWFPAASGDEPPAPVPEKRKIISHNSQK 120

Query: 121 SSSLTRSLTVHEYRGLRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHI 180
           S SL RSLTVHEYRGL+SPSSVLESPV KTSSLT SR+QVVVLKVSLNC+GCEKKVKKHI
Sbjct: 121 SFSLNRSLTVHEYRGLKSPSSVLESPVLKTSSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180

Query: 181 SKME 184
           SKME
Sbjct: 181 SKME 184

[Close]

BLAST of CcUC02G038070 vs. TAIR 10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-23
Identity = 101/303 (33.33%), Postives = 133/303 (43.89%), Query Frame = 0


Query: 1   MKKLDLFCKSRASTAVRSSFCRRPVAGDAN-SGDRRKGQLHFENHRKS------------ 60
           M+  D+FC S ASTAVR S        D N +G RR  Q H  +   S            
Sbjct: 1   MRFSDIFCSSPASTAVRHSTLHH----DGNVTGGRRSFQSHLRSQNPSKKKDKTVPCFSS 60

Query: 61  ----------TSC--------------STVNRKDINDLRRKSCADVDDL---KSPVSGSS 120
                      SC              ++    D+  +RRKS ADV DL   +S +  SS
Sbjct: 61  EMPLIPIPRHLSCRNSFESPSGFRPKIASARGSDV-QIRRKSSADVSDLRRSRSSLLSSS 120

Query: 121 GRYLLSDSPFLD------WFPASSGEEFSAPMPEKRKIISNSSQKSSSLTRSLTVHEYRG 180
            RYLL D   L       W   SS       +   R + S++S  SSS            
Sbjct: 121 SRYLLKDHKSLKGDDKDLWL--SSDRSKDLILYRDRNVTSSASSSSSS------------ 180

Query: 181 LRSPSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKR 240
             S SS   S  + +S    + +QVVVL+VS++CKGCE KV+KHISKM            
Sbjct: 181 --SSSSFSSSVTNVSSPAPSTDDQVVVLRVSIHCKGCEGKVRKHISKM------------ 240

Query: 241 VLVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWPS 258
                              EGVTSY++D  TKKVT++G +TP  ++ S+SKVK+AQ WPS
Sbjct: 241 -------------------EGVTSYTIDLATKKVTVVGKITPVGLVESISKVKFAQLWPS 251

[Close]

BLAST of CcUC02G038070 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 8.6e-18
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 138 PSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRVLV 197
           P S   SP  K S    S +QVVVL+VSL+CKGC  KVKKH+SK                
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSK---------------- 293

Query: 198 DTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWP 254
                          ++GVTSY++DF  KKVT+ GD+TP  VLAS+SKVK AQFWP
Sbjct: 294 ---------------LKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of CcUC02G038070 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 8.6e-18
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 138 PSSVLESPVSKTSSLTHSREQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRVLV 197
           P S   SP  K S    S +QVVVL+VSL+CKGC  KVKKH+SK                
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSK---------------- 293

Query: 198 DTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWP 254
                          ++GVTSY++DF  KKVT+ GD+TP  VLAS+SKVK AQFWP
Sbjct: 294 ---------------LKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of CcUC02G038070 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 85.1 bits (209), Expect = 9.5e-17
Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 143 ESPVSKTSSLTHSR------EQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRVL 202
           E+P  +  +LT  +      +QVVVLKVSL+C+GCE KV+KH+++M              
Sbjct: 159 EAPAGEDKTLTEKKTTCGDTDQVVVLKVSLHCRGCEGKVRKHLARM-------------- 218

Query: 203 VDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWPSP 256
                            +GVTS+++DF  KKVT+ GD+TP ++L S+SKVK AQFW +P
Sbjct: 219 -----------------QGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 246

[Close]

BLAST of CcUC02G038070 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 143 ESPVSKTSSLTHSR-------EQVVVLKVSLNCKGCEKKVKKHISKMEGIIFAHFKAKRV 202
           E+P  +  +LT  +       +QVVVLKVSL+C+GCE KV+KH+++M             
Sbjct: 159 EAPAGEDKTLTEKKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARM------------- 218

Query: 203 LVDTIISFARDLPKWNVIEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWPSP 256
                             +GVTS+++DF  KKVT+ GD+TP ++L S+SKVK AQFW +P
Sbjct: 219 ------------------QGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQFWTNP 247

The following BLAST results are available for this feature:

BLAST of CcUC02G038070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901867.1	1.9e-107	81.45	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida]	[more]
XP_004148220.1	5.5e-99	76.81	protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothet...	[more]
KAG6570732.1	2.9e-84	70.18	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp...	[more]
XP_022986932.1	3.8e-84	70.18	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima]	[more]
KAG7010577.1	1.4e-83	69.82	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of CcUC02G038070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	1.2e-16	46.55	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.8e-15	39.17	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8RXH8	1.1e-12	40.00	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]

BLAST of CcUC02G038070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG24	2.7e-99	76.81	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV...	[more]
A0A6J1J8X9	1.8e-84	70.18	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D3S6	7.8e-83	68.48	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1FTK0	1.3e-82	69.20	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5A7V4V4	8.0e-80	86.96	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of CcUC02G038070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28660.1	5.2e-23	33.33	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	8.6e-18	46.55	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	8.6e-18	46.55	Heavy metal transport/detoxification superfamily protein	[more]
AT2G37390.2	9.5e-17	39.50	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.1	1.2e-16	39.17	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 155..250 e-value: 1.6E-14 score: 55.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..43
None	No IPR available	PANTHER	PTHR46119:SF12	HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 1..197 coord: 214..265
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 1..197 coord: 214..265
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 161..248 e-value: 6.3926E-6 score: 41.0521
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 157..199
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 213..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G038070.1	CcUC02G038070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding