CcUC02G031700 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G031700
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr02: 27452694 .. 27454985 (-)
RNA-Seq Expression	CcUC02G031700
Synteny	CcUC02G031700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTTGAAATTTTACAAATCATTCCCTTTCCATCTGTTGATAGGAAAGCTTCAAATATGTGTTACTTCCACTTCACTTCAAATCTAACTTTCCATTCACATTTCAGCAAGTTCATGATTGGATGCTTGATAGAAACATCTTTTGACATCACTCCTTCAACTTCAATGCTGAGGTCAATGACAATGAGAGCTTCCCATAAGTTAACTTAGTTTTCTTTTCTTAATTGCTTGAAGGAAAGCATATCCAGATTCTCCTCCTGTCATTACCCCTATTCAACCATGTTCTTGATTTTGTACCCACATCAAATTTCTGCAGCATCAAGTGAAATGAAACCAAAAGATTTTGTCTTTTGACACGATGTTACTTTTGCCAATATCATTTCGCGTACCTCTACATCTACCACGACCAATTCATCATTTAAACGGTAAAAGTCAAACCAAGAAATGGCTCTACACAAAATCCTATAGCATCAAAGATCACTTCGCCATGGTATATGTAGGCTGTGCTTTCACATAACCAGACTTCAAATCAAGACAACTCAGCTACCTCTAACGAATCTTCTTCCTTAGTTTCATCCAACTGATACTATGATCTCGCTCCCTCCTCTTTGTTTTCAGCACTTTCAAATCTTTATCATTGCACCTACATCCCACTCGTCTTAATAATCAAGAACAGGAAATTAAATTTTCCAGAGTAAGTATAGCTCAACTAAAGTTAGAGCTCAGACAAACCTAGTCTCATCACCACAAAGCTTAGGTTATGAAGATATTTCGTCTTCCACCAAGTTAGGTAATTTCCATGCGAGATGCCTATAATACATAGAATTTGGCTACCCTCTGCTCAGAAGTCTTAAAGCTAACAATTCTACAAAATACATTTACTGCACGAGAAAATTAGTAGTACTACCACCATACTTACTCTTTTTCATTCATAATTAGACACATCATTAAATGATATATTAATTTATTTTATGGACTTCATATGATTCTTCAATGTTACTATTCTAACAAATAATAAACAAAGGTAGTATGAAAAAGAATCATGCTAGAATTTTCCCCCTACTTAACACATAAAGCCCCTGCAAGAAGTACCCTGTTAGAGGCTTAGTAACACATTTTAACCATCTACCTGTATCAATGAGTCTCACATGCCTTTTTTCCTTGCATAAGTAAATCAGATGGGGCTTCTACCTCATAATGTAGATAGAATAAAGTATTCTATTGTTTATGACTACTGGATAGACTATAGAGTTCTACAAGTAAACAGTAATGGCAAAATCATAGAGAACATTGGTGCAAAAACAAAAAGGAACACATGGGAGAGACCAAATTTAGGTTTGCTGGCCACTATGAAATAATTATTTATGCAACAAGACTACCATTTTAGCCAAAAGCAATAGATAGAACAGCCCTATCATATTCAAAGTAGGAACTATCAAAAAAATTTCTGTATTTTTCTTTTCTTTTTTCATAATAAGAAACCAACTTCCATTAAGCAAAATGAAGGCATCCCCTGCCCGAACAGTCATAAACTCATAACTAGTACAAGTTCCTCAACAAACAACTAAAATGAATATTTTTTCTATTATGGGAAACTTTCAAGCTAGCTTGTGAACCCAAAATCACAAAAATATTTGCAACTTGCTTATTTTGACCATGACTACACTTGCTTGCACCTTTTTTTTCTTTAACAAGAAACACCTTTTTTATTGATTTAATGGAAAGATATAAAATGCTCAAGAATACAAACTCCGATTCGGAGGGAAAAGAACAAAGCATCCTACCAAACTAATGACAAGAAGATATATATAAGAAAAAATTGGCAAAACAAGCTCTCCAAGAACAAAAAGGACCCAACCAAACACAAACCCTGAAAAATGATTGTTCAGAAGATAACTCCACAAGGAAAGCCTCAGCCGCGAACATCAAAGAGGAAAAGAGCAAGGCACCATACCCAGTCAACAATGCCAAAAACCTCCAAAGAAAAGCCACCAAACAGAAGAGTCAACATTCAAAATCAGAAAGACCACCAACGAGGCTATTGAAAGCAAAGTCCAGCTCACAAAATGACCTGGCAGCAGAAAACCAACAGTAGCAATAAAACCATTCAGAAAACCAGACCTAATTTTTAGGCTTAATCTCATAAAAAGTACTCTCAGTTTCTGCACCATATTGAAAGAGATCTTCCTACGTGAAGGGAGAATGAAAGCAGGGCAACCAACTTGGCTCAGAGGGACCCGAAGAACGTCATGGCTTCATAACAATAGCTTGGGAAGAGGGATCAATTGA

mRNA sequence

ATGCAGATTTTGTCTTTTGACACGATGTTACTTTTGCCAATATCATTTCGCGTACCTCTACATCTACCACGACCAATTCATCATTTAAACGGTAAAAGTCAAACCAAGAAATGGCTCTACACAAAATCCTATAGCATCAAAGATCACTTCGCCATGAGTAAGTATAGCTCAACTAAAGTTAGAGCTCAGACAAACCTAGTCTCATCACCACAAAGCTTAGGTTATGAAGATATTTCGTCTTCCACCAAGTTAGGACCCAACCAAACACAAACCCTGAAAAATGATTGTTCAGAAGATAACTCCACAAGGAAAGCCTCAGCCGCGAACATCAAAGAGGAAAAGAGCAAGGCACCATACCCAGTCAACAATGCCAAAAACCTCCAAAGAAAAGCCACCAAACAGAAGAGTCAACATTCAAAATCAGAAAGACCACCAACGAGGCTATTGAAAGCAAAGTCCAGCTCACAAAATGACCTGGCAGCAGAAAACCAACAGCTTAATCTCATAAAAAGTACTCTCAGTTTCTGCACCATATTGAAAGAGATCTTCCTACGTGAAGGGAGAATGAAAGCAGGGCAACCAACTTGGCTCAGAGGGACCCGAAGAACGTCATGGCTTCATAACAATAGCTTGGGAAGAGGGATCAATTGA

Coding sequence (CDS)

ATGCAGATTTTGTCTTTTGACACGATGTTACTTTTGCCAATATCATTTCGCGTACCTCTACATCTACCACGACCAATTCATCATTTAAACGGTAAAAGTCAAACCAAGAAATGGCTCTACACAAAATCCTATAGCATCAAAGATCACTTCGCCATGAGTAAGTATAGCTCAACTAAAGTTAGAGCTCAGACAAACCTAGTCTCATCACCACAAAGCTTAGGTTATGAAGATATTTCGTCTTCCACCAAGTTAGGACCCAACCAAACACAAACCCTGAAAAATGATTGTTCAGAAGATAACTCCACAAGGAAAGCCTCAGCCGCGAACATCAAAGAGGAAAAGAGCAAGGCACCATACCCAGTCAACAATGCCAAAAACCTCCAAAGAAAAGCCACCAAACAGAAGAGTCAACATTCAAAATCAGAAAGACCACCAACGAGGCTATTGAAAGCAAAGTCCAGCTCACAAAATGACCTGGCAGCAGAAAACCAACAGCTTAATCTCATAAAAAGTACTCTCAGTTTCTGCACCATATTGAAAGAGATCTTCCTACGTGAAGGGAGAATGAAAGCAGGGCAACCAACTTGGCTCAGAGGGACCCGAAGAACGTCATGGCTTCATAACAATAGCTTGGGAAGAGGGATCAATTGA

Protein sequence

MQILSFDTMLLLPISFRVPLHLPRPIHHLNGKSQTKKWLYTKSYSIKDHFAMSKYSSTKVRAQTNLVSSPQSLGYEDISSSTKLGPNQTQTLKNDCSEDNSTRKASAANIKEEKSKAPYPVNNAKNLQRKATKQKSQHSKSERPPTRLLKAKSSSQNDLAAENQQLNLIKSTLSFCTILKEIFLREGRMKAGQPTWLRGTRRTSWLHNNSLGRGIN

Homology

The following BLAST results are available for this feature:

BLAST of CcUC02G031700 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G031700 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G031700 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC02G031700 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G031700.1	CcUC02G031700.1	mRNA