CcUC02G025050 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC02G025050
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pectin lyase-like superfamily protein
Location	CicolChr02: 9238526 .. 9239295 (-)
RNA-Seq Expression	CcUC02G025050
Synteny	CcUC02G025050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTGATAATTACTGCACCAGGGAATAGCCCCAACAGGGATGGAATTCACGTGAATAGTTCAGAAGAGATTAAAATTCTCAATGCACAAATCTCAATGGGAGATGATTGTGTGTCTGTTGGAGATAGTAACAAGCAAATAACTATTACCAATGTAACTTGCAGACCAGGACATAGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTTGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATATCCAAACTCTGACATGCATTTTAAAGATATTGAAATGGTTACTGTCAGCAATCCTATCATAATAGACCAAGAAAATTGTCCATCGAATCAAGGCAACAAGAACGTATGTATTAACTTCAAGTAACATTTTTGTTAGGAAAAAAGAAAGAAAGAGAGAGTAATGTTTTGTGACTAATGTTATCTTATGTGTAGATTCCACAAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCATAGTCACTTTTGCTACTCCCGTGGCAGTTAAGCTTGTTTGTGTTTGTAGCAAAGATGTAGCATGCAAAGGTGTGGAAATTATTGATATTGACCTAACTTACACAGGAAGCCGAGGACCAATTATGTCTCAATGTGTAAATGTACTAAATCCCATCATTACTGGAAAACAAAACCCTCTTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGAC

mRNA sequence

AATGTGATAATTACTGCACCAGGGAATAGCCCCAACAGGGATGGAATTCACGTGAATAGTTCAGAAGAGATTAAAATTCTCAATGCACAAATCTCAATGGGAGATGATTGTGTGTCTGTTGGAGATAGTAACAAGCAAATAACTATTACCAATGTAACTTGCAGACCAGGACATAGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTTGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATATCCAAACTCTGACATGCATTTTAAAGATATTGAAATGGTTACTGTCAGCAATCCTATCATAATAGACCAAGAAAATTGTCCATCGAATCAAGGCAACAAGAACATTCCACAAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCATAGTCACTTTTGCTACTCCCGTGGCAGTTAAGCTTGTTTGTGTTTGTAGCAAAGATGTAGCATGCAAAGGTGTGGAAATTATTGATATTGACCTAACTTACACAGGAAGCCGAGGACCAATTATGTCTCAATGTGTAAATGTACTAAATCCCATCATTACTGGAAAACAAAACCCTCTTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGAC

Coding sequence (CDS)

AATGTGATAATTACTGCACCAGGGAATAGCCCCAACAGGGATGGAATTCACGTGAATAGTTCAGAAGAGATTAAAATTCTCAATGCACAAATCTCAATGGGAGATGATTGTGTGTCTGTTGGAGATAGTAACAAGCAAATAACTATTACCAATGTAACTTGCAGACCAGGACATAGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTTGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATATCCAAACTCTGACATGCATTTTAAAGATATTGAAATGGTTACTGTCAGCAATCCTATCATAATAGACCAAGAAAATTGTCCATCGAATCAAGGCAACAAGAACATTCCACAAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCATAGTCACTTTTGCTACTCCCGTGGCAGTTAAGCTTGTTTGTGTTTGTAGCAAAGATGTAGCATGCAAAGGTGTGGAAATTATTGATATTGACCTAACTTACACAGGAAGCCGAGGACCAATTATGTCTCAATGTGTAAATGTACTAAATCCCATCATTACTGGAAAACAAAACCCTCTTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGAC

Protein sequence

NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSNPIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD

Homology

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BLAST of CcUC02G025050 vs. NCBI nr
Match: XP_038895545.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 5.3e-84
Identity = 164/227 (72.25%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V ITAP NSPN DGIHV+SSE I ILN +I  GDDC+SVGDSNKQI I++VTC PGH I
Sbjct: 184 HVTITAPDNSPNTDGIHVSSSEGINILNTKIETGDDCISVGDSNKQIAISDVTCGPGHGI 243

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKY+KE+ V GV V KCKLINT NGVRIKTWPDS G +P  DMHF+DIEMV VSN
Sbjct: 244 SIGSLGKYSKEQAVEGVTVKKCKLINTSNGVRIKTWPDSVGAFPAIDMHFEDIEMVNVSN 303

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PIIIDQE CP NQ N+ +P KIKIS VSFKNI  T ATPVAVKL  VCSK V C+GVE+ 
Sbjct: 304 PIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIKGTSATPVAVKL--VCSKSVPCEGVEVA 363

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DIDL+Y+GS+GPI SQC NV NPI++GKQNP  CAE API+A PSTD
Sbjct: 364 DIDLSYSGSQGPITSQCANV-NPIVSGKQNPRICAEPAPIDA-PSTD 406

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BLAST of CcUC02G025050 vs. NCBI nr
Match: KAA0059139.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK21608.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-83
Identity = 165/227 (72.69%), Postives = 183/227 (80.62%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           NV I AP  SPN DGIHV++SEEI ILN +IS GDDCVSVGD NKQITITNVTC PGH I
Sbjct: 180 NVTIIAPEKSPNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGI 239

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKYT EKEVAGV V  C LINT NGVRIK+WPDSA  Y  SD+HF+DIEMV VSN
Sbjct: 240 SIGSLGKYTTEKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSN 299

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PIIIDQE CPSNQ NK IP KIKI NVSFKNI  T ATPVA+K   +CSKD+ C+ VE+ 
Sbjct: 300 PIIIDQEYCPSNQCNKKIPSKIKIRNVSFKNIRGTSATPVAIKF--ICSKDLPCEDVEVA 359

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DI+L+YTG++G I SQC NV+ PIITGKQNP AC E APIN+ PSTD
Sbjct: 360 DINLSYTGTQGRITSQCRNVI-PIITGKQNPRACIEVAPINS-PSTD 402

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BLAST of CcUC02G025050 vs. NCBI nr
Match: XP_031744817.1 (exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein Csa_020330 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 7.7e-83
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V I+AP NSPN DGIH++SSE+I IL+++IS GDDCVSVGDSNKQ+TITNVTC PGH I
Sbjct: 175 HVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGI 234

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLGKYTKEK+V GV V  CKLINT NGVRIKTWPDSAG +  SDMHF+DIEM  VSN
Sbjct: 235 SVGSLGKYTKEKDVVGVSVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSN 294

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKIS VSFKNI  T ATP+AVKL  VCSK + C+GVE+ 
Sbjct: 295 PVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKL--VCSKSIPCEGVEVA 354

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DI+LTY+G RGPI+S+C NV  P+ITGKQ+P  CA+ AP  A PSTD
Sbjct: 355 DINLTYSGIRGPILSECANV-QPLITGKQSPQICAKPAPAGA-PSTD 397

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BLAST of CcUC02G025050 vs. NCBI nr
Match: XP_031744814.1 (exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN: exopolygalacturonase [Cucumis sativus] >XP_031744816.1 exopolygalacturonase-like [Cucumis sativus] >XP_031744818.1 exopolygalacturonase-like [Cucumis sativus] >KAE8645716.1 hypothetical protein Csa_020252 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 7.7e-83
Identity = 160/227 (70.48%), Postives = 186/227 (81.94%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V I+AP NSPN DGIH++SSE+I IL+++IS GDDCVSVGDSNKQ+TITNVTC PGH I
Sbjct: 175 HVTISAPENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGI 234

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLGKYTKEK+V GV V  CKLINT NGVRIKTWPDSAG +  SDMHF+DIEM  VSN
Sbjct: 235 SVGSLGKYTKEKDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSN 294

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKIS VSFKNI  T ATP+AVKL  VCSK + C+GVE+ 
Sbjct: 295 PVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKL--VCSKSIPCEGVEVA 354

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DI+LTY+G RGPI+S+C NV  P+ITGKQ+P  CA+ AP  A PSTD
Sbjct: 355 DINLTYSGIRGPILSECANV-QPLITGKQSPQICAKPAPAGA-PSTD 397

[Close]

BLAST of CcUC02G025050 vs. NCBI nr
Match: XP_031744868.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 7.7e-83
Identity = 165/227 (72.69%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           NV I AP NSPN DGIHV+SSE I I N +IS GDDC+SVGDSNKQITITNVTC PGH I
Sbjct: 190 NVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGI 249

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKYTKEKEVAGV V  CKLINT NGVRIKTWPD A  Y  SD+HF+DIEMV VSN
Sbjct: 250 SIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSN 309

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CPSNQ NK IP KIKI+NVSFKNI  T AT VAVK   +CS   +C+GVE+ 
Sbjct: 310 PVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGTSATFVAVKF--ICSTVFSCEGVEVT 369

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DIDL Y G++G I SQC NV+ PIITGKQNP AC EAAP+N+ PSTD
Sbjct: 370 DIDLAYIGTQGRITSQCRNVI-PIITGKQNPRACVEAAPVNS-PSTD 412

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BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-56
Identity = 115/223 (51.57%), Postives = 148/223 (66.37%), Query Frame = 0


Query: 4   ITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVG 63
           ITAPG+SPN DGIH+  S ++KILN  I  GDDCVS+GD +KQIT+  V C PGH +SVG
Sbjct: 188 ITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVG 247

Query: 64  SLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSNPII 123
           SLGK+T E+ V G+ V  C L  T NGVRIKTWPD+ G    SD+HF+DI M  V NP+I
Sbjct: 248 SLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVI 307

Query: 124 IDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDID 183
           IDQE  P NQ +K  P KIK+S +SFKN+  T  T  A  +V +CS  V C GVE+ ++D
Sbjct: 308 IDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGT--AEGVVLICSSAVPCDGVELNNVD 367

Query: 184 LTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPST 227
           L + G+  P  ++C NV  P++TG   P+  A  AP  +  +T
Sbjct: 368 LKFNGA--PTTAKCTNV-KPLVTGTA-PVCQAPGAPAASTTAT 404

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BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.9e-56
Identity = 115/216 (53.24%), Postives = 145/216 (67.13%), Query Frame = 0


Query: 4   ITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVG 63
           ++AP NSPN DGIHV+ S  + I ++  S GDDC+SVGD  +Q+ IT VTC PGH ISVG
Sbjct: 182 VSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVG 241

Query: 64  SLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDS-AGVYPNSDMHFKDIEMVTVSNPI 123
           SLG    EK V GV V  C   NT NGVRIKTWP S  GV   +D+HF+DI +  VSNP+
Sbjct: 242 SLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVV--NDVHFEDIIVQNVSNPV 301

Query: 124 IIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDI 183
           +IDQ  CP N+ NK++P ++KIS VSF+NI  T  T  AV L  + SK V C+G+E+ DI
Sbjct: 302 VIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSL--LRSKGVPCEGIEVGDI 361

Query: 184 DLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAA 219
           D+TY+G  GP  S C N+  P + GKQNP  C  +A
Sbjct: 362 DITYSGKEGPAKSSCENI-KPSLKGKQNPPVCTASA 392

[Close]

BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-55
Identity = 111/215 (51.63%), Postives = 139/215 (64.65%), Query Frame = 0


Query: 4   ITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVG 63
           I+A   S N DGIH+  S+ + I+N +I  GDDC+S+GD +K I ITN+TC PGH ISVG
Sbjct: 148 ISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVG 207

Query: 64  SLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSNPII 123
           SLG+Y  E+ V G+ V  C +  + NGVRIKTWP S      S+MHF+DI M +V  PI+
Sbjct: 208 SLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSE-PGEASEMHFQDITMNSVGTPIL 267

Query: 124 IDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDID 183
           IDQ  CP NQ    +P  +K+S +SFKNI  T  T  AVKL  VCSK   C GVE+ DID
Sbjct: 268 IDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKL--VCSKSFPCNGVELADID 327

Query: 184 LTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAA 219
           LTY+G  GP  S C N+  P I GKQ P  C+ +A
Sbjct: 328 LTYSGKGGPATSVCENI-KPTIKGKQIPAICSGSA 358

[Close]

BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 110/214 (51.40%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           N+ I AP  SPN DGIH+   E +KILN +I+ GDDC+SVGD  K + I  V C PGH I
Sbjct: 176 NIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGI 235

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLG+Y  E++V  + V  C L  T NG+RIKTWP +A     + +HF+DI +  VSN
Sbjct: 236 SVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSN 295

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PI+IDQE CP NQ NKN P  IK+ +++F+NI  T     AVKL  +CSK   C+ VEI 
Sbjct: 296 PILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKL--LCSKGHPCENVEIG 355

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLAC 215
           DI++ YTG  GP   +C NV  P + G QNP AC
Sbjct: 356 DINIEYTGPDGPPTFECTNV-TPKLVGAQNPKAC 386

[Close]

BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-53
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 0


Query: 4   ITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVG 63
           I AP  SPN DGIH+  SE + I+ + I  GDDC+S+GD  K + I  +TC PGH IS+G
Sbjct: 190 IEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIG 249

Query: 64  SLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSNPII 123
           SLGK+  E+ V G+ ++ C + NT NG RIKTWP   G    S++HF+DI M  VS+PI+
Sbjct: 250 SLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG-GAVSEIHFEDITMNNVSSPIL 309

Query: 124 IDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDID 183
           IDQ+ CP N+  KN   K+K+SN+SFKNI  T A P A+K   +CS    C+ VE+ DID
Sbjct: 310 IDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKF--ICSGSSPCQNVELADID 369

Query: 184 LTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAP 220
           + + G+  P  SQC+NV  PI +GK NP+ C+   P
Sbjct: 370 IKHNGAE-PATSQCLNV-KPITSGKLNPIPCSGPVP 400

[Close]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL
Match: A0A5D3DDK3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00030 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 165/227 (72.69%), Postives = 183/227 (80.62%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           NV I AP  SPN DGIHV++SEEI ILN +IS GDDCVSVGD NKQITITNVTC PGH I
Sbjct: 180 NVTIIAPEKSPNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGI 239

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKYT EKEVAGV V  C LINT NGVRIK+WPDSA  Y  SD+HF+DIEMV VSN
Sbjct: 240 SIGSLGKYTTEKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSN 299

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PIIIDQE CPSNQ NK IP KIKI NVSFKNI  T ATPVA+K   +CSKD+ C+ VE+ 
Sbjct: 300 PIIIDQEYCPSNQCNKKIPSKIKIRNVSFKNIRGTSATPVAIKF--ICSKDLPCEDVEVA 359

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPSTD 228
           DI+L+YTG++G I SQC NV+ PIITGKQNP AC E APIN+ PSTD
Sbjct: 360 DINLSYTGTQGRITSQCRNVI-PIITGKQNPRACIEVAPINS-PSTD 402

[Close]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V ITAPGNSPN DGIHV+SSE+I ILN  I+ GDDC+SVGD+NKQ+ I++VTC PGH I
Sbjct: 182 HVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGI 241

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKY+KEKEV GV V KCKL +T NGVRIKTWPDSA  +P SDMHF+DIEMV VSN
Sbjct: 242 SIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSN 301

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKISNVSFKNI  T ATPVAVK+  VCS+   C+GVE+ 
Sbjct: 302 PVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI--VCSQSNPCEGVEVA 361

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPS 226
           DIDLTY+GS GPI SQC NV  P+I+GKQNP  C E AP   P S
Sbjct: 362 DIDLTYSGSEGPIKSQCANV-KPVISGKQNPPICGEPAPAGGPSS 403

[Close]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V ITAPGNSPN DGIHV+SSE+I ILN  I+ GDDC+SVGD+NKQ+ I++VTC PGH I
Sbjct: 182 HVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGI 241

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKY+KEKEV GV V KCKL +T NGVRIKTWPDSA  +P SDMHF+DIEMV VSN
Sbjct: 242 SIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSN 301

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKISNVSFKNI  T ATPVAVK+  VCS+   C+GVE+ 
Sbjct: 302 PVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI--VCSQSNPCEGVEVA 361

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPS 226
           DIDLTY+GS GPI SQC NV  P+I+GKQNP  C E AP   P S
Sbjct: 362 DIDLTYSGSEGPIKSQCANV-KPVISGKQNPPICGEPAPAGGPSS 403

[Close]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V ITAPGNSPN DGIHV+SSE+I ILN  I+ GDDC+SVGD+NKQ+ I++VTC PGH I
Sbjct: 182 HVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGI 241

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKY+KEKEV GV V KCKL +T NGVRIKTWPDSA  +P SDMHF+DIEMV VSN
Sbjct: 242 SIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSN 301

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKISNVSFKNI  T ATPVAVK+  VCS+   C+GVE+ 
Sbjct: 302 PVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI--VCSQSNPCEGVEVA 361

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPS 226
           DIDLTY+GS GPI SQC NV  P+I+GKQNP  C E AP   P S
Sbjct: 362 DIDLTYSGSEGPIKSQCANV-KPVISGKQNPPICGEPAPAGGPSS 403

[Close]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V ITAPGNSPN DGIHV+SSE+I ILN  I+ GDDC+SVGD+NKQ+ I++VTC PGH I
Sbjct: 182 HVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGI 241

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLGKY+KEKEV GV V KCKL +T NGVRIKTWPDSA  +P SDMHF+DIEMV VSN
Sbjct: 242 SIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSN 301

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           P+IIDQE CP NQ N+ +P KIKISNVSFKNI  T ATPVAVK+  VCS+   C+GVE+ 
Sbjct: 302 PVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI--VCSQSNPCEGVEVA 361

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPPS 226
           DIDLTY+GS GPI SQC NV  P+I+GKQNP  C E AP   P S
Sbjct: 362 DIDLTYSGSEGPIKSQCANV-KPVISGKQNPPICGEPAPAGGPSS 403

[Close]

BLAST of CcUC02G025050 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-57
Identity = 115/224 (51.34%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           +V I AP  SPN DGIHV  S+ IKI+N+ IS GDDCVSVGD  K + +  VTC PGH I
Sbjct: 176 DVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGI 235

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           S+GSLG+Y+ E+ V+G+ +  C L  T NG+RIKTWP +A     SD+HF++I +  VSN
Sbjct: 236 SIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSN 295

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PI+IDQE CP NQ NK  P  IK++N+SFK I  T     AVKL  +CSK   C+ VE+ 
Sbjct: 296 PILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKL--LCSKGYPCQNVEVG 355

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPP 225
           D+++ YTG+ GP   QC NV +P + G Q P AC  ++P+  PP
Sbjct: 356 DVNIQYTGADGPATFQCSNV-SPKLVGTQIPKAC--SSPVTKPP 394

[Close]

BLAST of CcUC02G025050 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.5e-57
Identity = 116/218 (53.21%), Postives = 145/218 (66.51%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           N+ I AP +SPN DGIH+  S+ +KILN+ IS GDDC+SVGD  K + +  VTC PGH I
Sbjct: 176 NIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGI 235

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLG+Y  E++V+G+ V  C L  T NG+RIKTWP +A     SD+HF+DI +  VSN
Sbjct: 236 SVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSN 295

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PI+IDQE CP NQ NK     IK+ N+SFKNI  T     AVKL  +CSK   C+ VEI 
Sbjct: 296 PILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKL--LCSKGYPCQNVEIG 355

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAA 219
           DID+ Y G+ GP    C NV +P I G Q+P AC+  A
Sbjct: 356 DIDIKYNGADGPATFHCSNV-SPKILGSQSPKACSAPA 390

[Close]

BLAST of CcUC02G025050 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-55
Identity = 112/215 (52.09%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           NV + AP  SPN DGIH+  SE +KILN++I+ GDDC+SVGD  K + + NV C PGH I
Sbjct: 177 NVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGI 236

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLG+Y  E++V G+ V  C L  T NG+RIKTWP +A     S +HF++I +  VSN
Sbjct: 237 SVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSN 296

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PI+IDQE CP NQ NK  P  IK+ ++SFKNI  T     AVKL  +CSK   C  VEI 
Sbjct: 297 PILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKL--LCSKAHPCANVEIG 356

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACA 216
           +I+L Y G+ GP    C NV +P + G QNP AC+
Sbjct: 357 NINLEYKGADGPPTFMCSNV-SPKLVGTQNPKACS 388

[Close]

BLAST of CcUC02G025050 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 110/224 (49.11%), Postives = 142/224 (63.39%), Query Frame = 0


Query: 1   NVIITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSI 60
           NV I AP  SPN DGIH+  S  + I+N++IS GDDCVSVGD    + + NV C PGH I
Sbjct: 177 NVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGI 236

Query: 61  SVGSLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDSAGVYPNSDMHFKDIEMVTVSN 120
           SVGSLG+Y  E++V+G+ V  C L  T NG+RIKTWP +A     S++HF++I +  VSN
Sbjct: 237 SVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSN 296

Query: 121 PIIIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEII 180
           PI+IDQE CP NQ NK     IK++N+SF+ I  T     AVKL  +CSK   C+ V++ 
Sbjct: 297 PILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKL--LCSKGYPCENVQVG 356

Query: 181 DIDLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAAPINAPP 225
           DI++ YTG+ GP    C NV  P + G Q P AC      N PP
Sbjct: 357 DINIQYTGADGPATFMCSNV-RPKLVGTQFPKAC------NTPP 391

[Close]

BLAST of CcUC02G025050 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 5.8e-52
Identity = 106/216 (49.07%), Postives = 139/216 (64.35%), Query Frame = 0


Query: 4   ITAPGNSPNRDGIHVNSSEEIKILNAQISMGDDCVSVGDSNKQITITNVTCRPGHSISVG 63
           I AP  S N DGIH+  S  + ++ A+I  GDDCVS+GD  + + + NV C PGH IS+G
Sbjct: 231 IDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIG 290

Query: 64  SLGKYTKEKEVAGVMVNKCKLINTLNGVRIKTWPDS-AGVYPNSDMHFKDIEMVTVSNPI 123
           SLG+Y  E+ V GV V KC + NT NGVRIKTWP S  G+   S++ F+DI M  VS P+
Sbjct: 291 SLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGI--ASNILFEDITMDNVSLPV 350

Query: 124 IIDQENCPSNQGNKNIPQKIKISNVSFKNIIVTFATPVAVKLVCVCSKDVACKGVEIIDI 183
           +IDQE CP       +P K+K+S+V+ KNI  T AT VAVKL  +CSK V C  + + DI
Sbjct: 351 LIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKL--MCSKGVPCTNIALSDI 410

Query: 184 DLTYTGSRGPIMSQCVNVLNPIITGKQNPLACAEAA 219
           +L + G  GP +S C N+  PI++GK  P AC E A
Sbjct: 411 NLVHNGKEGPAVSACSNI-KPILSGKLVPAACTEVA 441

The following BLAST results are available for this feature:

BLAST of CcUC02G025050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895545.1	5.3e-84	72.25	exopolygalacturonase-like [Benincasa hispida]	[more]
KAA0059139.1	2.7e-83	72.69	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK21608.1 exopolygalactur...	[more]
XP_031744817.1	7.7e-83	70.48	exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein C...	[more]
XP_031744814.1	7.7e-83	70.48	exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN:...	[more]
XP_031744868.1	7.7e-83	72.69	exopolygalacturonase [Cucumis sativus]	[more]

BLAST of CcUC02G025050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	2.2e-56	51.57	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	2.9e-56	53.24	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P24548	3.2e-55	51.63	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
P35337	1.3e-53	51.40	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
Q39786	1.7e-53	48.61	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of CcUC02G025050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDK3	1.3e-83	72.69	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TRZ0	2.4e-82	69.33	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	2.4e-82	69.33	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3BWP4	2.4e-82	69.33	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	2.4e-82	69.33	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of CcUC02G025050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48140.1	1.6e-57	51.34	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	4.5e-57	53.21	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	4.3e-55	52.09	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.2e-52	49.11	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	5.8e-52	49.07	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 1..201 e-value: 8.4E-55 score: 186.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..197 e-value: 2.3E-52 score: 179.9
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 3..218
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 3..218
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC02G025050.1	CcUC02G025050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity