CcUC01G014370 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G014370
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 27145665 .. 27154275 (-)
RNA-Seq ExpressionCcUC01G014370
SyntenyCcUC01G014370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGTCGGCTCTCAGCCTCATAAACCATCTTACGATGCAATCGGGTACTGCTTTGTGGTATGAATAACCTGCAAGGCTATCATATTTGCTGTTGCTTCAATATTTGAATATAAGATGAATGCTATCATGTTTTGGTATTTGAACATAAGTCAGAGTCAGGCATCTTATAGGGCAAGATGATAGTCAACCACTTCCATCAATTGATTCTAGTTCTTCCTTGTGATAGAGCAGCAGGATTTGCTTGCTTGATGAATCCGGAAGCTTAAAGTTACACCTGGCCAATCTGTGTTCATTTTTTGTTGATAAAAGGGAGATCGTTCCTTCTACCTCTACAAAAATTGCTTAGAAGTTTCAAATATTTAAAAATCAGAAGATTCTCATATGGTCCTAGTTTCTATGAAACTGAAGATTCTTACCTGGGGTTTCCTTGCAAGTGCGGTTCTTGTTCATGTGAGGACTTTTGAAACTAATTAAAGAAGAAAAGAAGAGGTCCAATAAATGCTGGAGACAAAGATAGGCAAATTTTTGTCATTGGACTTCAATTATGGTACGTTTTCTCCCCAGTTACCCTCCATTGCTTCACTTGCAATTTTGAAAATTGACTTTTGACATCACAATCCACTGTTTTTCTTCCAATATGTATTAGTTTATTTCTCACGTTCTACTATATGTGACAGAGGAAGGGTGGATTAGGGAGAAAGATTGGGTAGCCTCAAGTTCCAAACTGGCAGAGAAATTAAAATCCAATAGAATTAATGTCTCTCGATTTTAAAAACAAAATACAACACCTTTTATTAAGAGATTGAAAGGGACTAATGCTCAAAGATACAAAACTCCGAAAGGAGGTGAAAAGAAAGGGGCCAAAACAAAAAGTAAACAGTACGGCCATAGCGGTAACAAAGAAACATAAGCTTTAAAATTTTGAAAGGCATAATAGATGCAAATAAATATCTTGAATTGGAAAATGAAAATCCTTGCAAGCTTCTTAGAGAGGGAGCACTATGAAGAAGACTTTTAATCAAGCTGAATCAAATTTATCATGCGTAGAATTTTAGAAGATGGGTTGATTTCTTTCCATTCATAGCTCAAAATGGAAAACTTTTTGACGGCAATAAGTACCACATAGAAGCTGAAAGCACTTCCATTCAAAGAATTTGAAAAAAAACCCATTAGAGATCGAAGAAGGCAAATAACATAAACCAACACTTTTGAGAATATGAACATTCAAAGAAAGTGTTGTTAAGAGATTCCCTACCTTTAAACAAAGAGAGCAAGCTGATGGCATAAGACATTGTGAGAACTTTTTCTACAAGATTTCAGAGAAATTGAGGCTGCCATTAAACACAATGCATATAAGATTATTTGTTGTCTTTGAACTCTCTCTCCATCTTTCAGAAACCTTCTAAAAATAAGAAAACCAAACCAAACCGTTTGGATGAGCAACATAAGAAATAGTTAGAACCATTAAACCAAGGATCCTTCCAAAAAAAGAAAGAAAACTCTTCGATTGGCCACTTCATTTAACAACCTTTCTTTCAAGAGAGTTAGGAAAACATATATCTTAAAAGAATACAGAGAAAAATTACTTTACGTATTGATAAGCCCCAATTATTCGATGTACCCTATGGCTAACAAATGTTCATGAGGGCTAAGCTGTAATGTATCTATACAGAGAAAAATGTTGATCTAACCCATAAAAACAACAATATCACATTTAAGGATTTCCTATGCCCAGGACTGGACCAATACAATTTGAATTACCTAGCTCCACCTGAATCGAACTCTAGTATTGAGAAAGAAAACAATGATTGCAAGATTTGTACTATGGCGGTTGCTTAAGTATTGTGAGTTTGGAAGAAACGGAGAACCGTCATTTGCTCTCAGAATCACATGCACATTTTCTGCCGCTCATCTTCAAATATTGAGGTTTCGTAATTTATGGTCCTCGCATCTTCTCAACAATGTTCCTACTCTTTTCTTCAATATTACGTCTCTTTTCTTCTAGTTTCTCCCCCATCTTCTTCCCTATTTCTAGCATTCTCGCTCTTCTTCCTATTCTCCTTGGCTTTGCCTCATCTTCTTCGGCGTTATGATTTTCCTGCTCAGATGATAAGCTGCTTATAGACCTAGATGGTGATTGATTCTCTTGGGCGAACTCTCTGTTTTGCTGGAAAATTTCTACTGCTTGGTCATTTTCTAATAAAGGGATTTTCATTTCATTTTCGTCCGATGTCTTTTTTGTAGCTGGAGCTGGATTAGCAGTACTTGATGAAGGCTTTGATGCATTTGACAAGTCAGAGTGTGGTTGAGAAGATTCAATGTTCTTAGGTCTTTTATGCTCAATGCTCTGTTGGTCTGTGGAGGTGGTCTTACTGGCTTCAGATCTATTTTTGGCCTCAACAGGATGTGATCTTTGATTTTCACATGAAGTTTTGTTCTCAGAAGCTCCTTGGTTAAGCCACATAAATGGTGCAACATCCCTTGGAACCCAGTCATCCTTCTCTGCCATCATAAATGGGATGTAAATACTTTCACTGTTGGGGAGCACTAAAGTATCCCTGATCACTGCCTGCAAAGTTAATCGGTAACAGTGGCAGTATCAGCAATAGTTACACAACAATATTGCTCAATTTCTTAAATTCATCCGACTATGCTTAAGAAACTTGTATTTTTCCATAGCAAAATGACTATGAATCCTATTTATCAGGTATGTACAATAATTATAGAAATATCAAAGTGAGCATAACTCAGTAGTTATTGAGTTATTGACATGCACTCATTTATTAGAAGTTCAAATTCCTATATCTCCACTCGTACTAAAAAATACGATGATTATGGAATGTTGCGAATGCTAACAAATTGACATACTTGAGGCCTGATTTTCTATTTGAAACCATCCAATGTGATTCTTTCTTATCATTTACTTCCTCCCTTTTAATATGAAACAAAAATATCCTGACACAGTTTCTTTTGGTGACTTCCACAAATGTCTGTCTGATTCACCATGCTCTACATGAAAAGCTAACATCCCAGCCTCTTAATGCTCGTGTGACACCAACTCTAAAATCTTAGGATCTCAATCACAAGAGAACTTATAAAGAGAAATTACAATATGCTTTTGAGAGGATTATCTCTATCCTACAATCTACCCATTATGGATCGCTTCTCCAAAATTAAGCCTAGTTTCCTCTATTTACAACCAACCAAGTAACTTTTAACAAACTACCAAACAATTGCCGTTGTGCCACTGCTAATATCCCAATAACATTGTCAATATTTTCACATTAATACTCTTAACAACGTCGCGAGTGATATAACATAAACATATTTATATTCATAAAACAGTGGAGAAACATATCCCATCATGTTAGGAAACACATCTCCATACCTTAAGCCGATTGTTCAAAAATTGAGCAACATGTGCACTAGTTATCTTATGGTCCCCAAACGATGAATCCAAGCGCAACTCCAAATAAGGCATGGATGTAAAACTGTACCATAGCTGATCAGAAGGAGGCGGCTTTATATGTAACCGAAGTGTCCCTCGAAGAGATGCAATCTTTATTACCAAAGAGATCGGCACCTATAAATTTAAAACCAAAATGAGAAAAGTATTGAAGGGGCTAACTTCATGCATCCAAGACATCTAACACAATGGCTCTTCTATATTTATATATTTTTTTAATCTGTGAGTGTTGGACCAACTTATGTGCACATCGACTAATCTCATGGGACAACCCGCTTAACCCTAAAACATTTGAGTGTCAAGGAAACTCGTAGAATATTAATTCCTAATTAGGTGGCCACCATGAATTAAACCCATGACCTCTTAGCTAAAGTCTGTGTCTCATTTTTTATGACTAGGTCAACCCATGATGGTTAATGGCTCTTTTAGTTTCAAGATATACTCCTACTTAATTCTCAAGTGCATAAATTCTACAAACCTGAGAAACCTGTTTAGCAATGGAATTCATTAGATATTTCCACCTGGATCCACTGGAGGATGAGGACGTGGGGTTCTTACTGTTTCCTGACCCACCTGCAACCAAACATTGTATTGAACTTCGAACTACTCAGAAAATATATTTGTCTAGCATTTTCAGGATGAGAATATAATTGAACCTAAAATCAGAATTGTAACTGCATATCTGTTTGACGGTGTACATCATGGCAAACAAAAGTCACTAGGTTCCAAATTTCCAATTAAAGAAAACCTTAGATCGAAGCCTTTCGTAAAATAAGAGTCAGCAAACAGAGTAAAAAAGTAAACAGTGTATTAATAGATCATAGCGAAAACTACCTCTTATCTAACTTGTAACTTTATCAACTTCACTCATTTGATTATAACTAACTATATCCATTTCAATACCGCCTCATAGACAAACTAGAAATTTAGTTACCCTTACCCATTTAATACTTTCAAAGTTCAAAAATTCCAAATACAGAATTTAGCTTGCAGATATGTACAGATATACGAAGACCATTTTTTGACTGAAGTTTCTAAATTTTAGGTCTCCTAATCACTTCCGATATTATCATTATATTCATTTCACCTTTAGATGATCTTAGGTCATCTGGACTTTGTGCAAGCAATACGGTCAAAGTAAGTAGAAACATAAGCAAAAAGCAATTTAGGTTATCAATTCATGAGGATATCATATAACACAAATATATCATGAAAACCATCTGTTGGTTAATCAGTCACCTTCCTCGTTCTGGTCTGTTCCTTCAGAGGTACTGAGCTGCTTTCCAAGATAATCTTCTAGAAATGAAGAGACCTCCCCAACATCAGTGGAATCAGATTTTGAGTCTACTGCGCTTTTTTGAAGATCTAATTCATGAACTTCAATTCTAGTTTCGATGTCTAAGGCAAAGCCCCCAGAGTATTCAAAATCGACCTCCAAGGCCCATACCTCATTCAATTCAAAAGGAAGAACCCTAATAATATTAATATTGGGCGGGAGGTTTCCAGGATGAACTTTAGTACAGATAATTTCGCCAATGTAACTTGGAGTCCTCATCTTGGACAACATCCTCTGCCATGAGAAAAAAAAGTAAAAAGACTCTTATTAAATTGCAAGAACTAAAACAGTAACATTGCATTTATTCCAAGAAATGACAGTCCAGAATGATAATATCCTAATCATTCAACCATAAATGACTTATACAACATCTACAAGTTTTGCAGTTGACACCATTATTGAGCGAATAAATATGCGTTCCTCATTTTCCCAGTTGAGACTTTTCCAGTAACAAATAGGTTTGTATTTAAGGATTAAGTTCCAAATATTCATCAAACAATAGAAGAAAGAAATGACAGGAGTATGTTTGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGTGGTGGGAGAGCCAAGCCACTTAAGTACCACACTGGTCATCCCATTCTAATCAATGTGGGACAACGGTAGCCCATACTACCTTGGATCCTATCCCCAGAAAGCCGACGTCCCAGCGGCTACTCCGACGGTACTTCACTCGGCCACACCCGGTTAGAATCCTCCACCAGTTCCACTCTGGAACATCAACAACCGGTTTTGATACCATTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGTGCTGGGAGAGCCAAGCCACTTAAGTACCACATTGGTCATCTCATTCTAACTAATGTGGGACAAAGATAGCCCATATTACCTTGGTTCTTAACATAGTATTAAAAACTGAAAAAAATCATCTAAATGCCTTGACACTCATAAATTGATTCAACATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAGAAAAAGGATCTCAAGACATGAACCTGAATTCGATCATGTAAGGATTTCATTAGCCCTTCATTGCTTGTGGCGTCAAAAAAGAATCTTGATATCAACAAATTCCAACAAAGCGTTCCTTCATCAGTCCAGAATCTGTCATCAGTATCTGCGTCAGAGATAACAGAGGCATGACTTTGGCTAATTGAATGAGTCAAGGTTGGTGGGGCTGCCATATCTTCCTCAAAGAAGCTTTTAGTACTCTGCACCTTTGGAATTCCCCTTCCTAAGCCCGCTGATGAAATAAAATCTGGACTCGGATGAAACCTCTCACTAAACTTTTTTTCTTCACGCAAAGAAGAAGAAGCATTTACTTTGTAGTCTGAAGCAGCTTTTGAAGTCTTCTTTGCCAGCTTTTTGAAAAATTGTCGGACCTTTGAAGGAGGAGCGTTAGGCTTGATCTCCTTATCTGTTGCTTCAGCATAGCACCCTGTAGAGGGCTTCATAAATGAAGGATACCCAGTACTCAATGAAGAGATATAACTTTGGAACTCTTTCTGCAATTTAGCAAACCACTGCAATCTTTCTTTGTCAACACATGAAGCTAAACGGAGGGCTTTACACCATGATTCCTTCTCCCAGGAAGTCTCAAGAAAAATGAAAATTTTTTTACTTTCATTATAAATTACAGAGGCCTTATTTTCCAATTTTAAAGGGAACCTTTTCACCCTGAAATTTAAAAGATGACGTCTGAAATTCAGAAGAAGAATCAAAGGAAAAACTTATATTCTCATTATATACCTAAAAGTCAAATTCCATAATGATGTCAAGTATCCCACTCTAACACAGCAGAAAAGATTTCCAACAGGTTGAAACCATTAAGGACCCATATAAATTCAAACAGACAACAAAACAAATATCTGCACTTTCCATACATCAAGAATATCAACATTTTCATAGCTACATCATGCAGCCTTTTCAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAAAAAAAAAAAAAAAAAAAAAAAGCTATATCATGTAGGGTCAATTTAGAGGAATGAATAAGCAACAACAAAAAGCAGTGAGCAAATTAAAAATCTAGCATTTAATACAAGAGTATGATGAGAGGACCAGCTTTTGAAAAGCTCTAGACCCCAAAATAGTACACACTACTAATTTTACTTGTATGCATAGCCACAAGCTACTATAGATCATAACAAGGAATTCGTGCAACTTAATTTCTTCTGGGGGATATAAGCACTTAAGAGATCACCTCAAATTCATTTCAAAATTTAACCACTCTGATTAACTATGGAAAACAAAAGTTATTGAGAGAATATTGGCCAGGGTTGAAGCTATTAGAATTGAAATCAGTATCTCATGGACAAGCAATAAGTTAAAATGAAAGAGGCATATGTATGTAAGTAAAAAAATTTGAGCATGAAGATCCTCATTATATGCTAAACTTCGGTGCTGTTATGGAAACCCATAGCTTACACTTGAGTGTCCTAATTGAGTGATAAAACCTTGCAACTTCTCTTCTCTAAATTTCCCAAATATGTCTAGTATCATGTGCATATTCATAGTCCCTCAGAATTAAATTTTTATATCAGTTCCATTTGATTTAAATCTTAGAAAAGTAAGAAAACAAGCAAGTGAAATATGAAAGAAGTTACCATTTTCTTGAAGGCAAGTCTGCTGCTGAAACAGCTTCAACTGTGCAGCCATTTAATTGAATTGTTCTCTTCTTACCATCCTGTTCCAATATCATTAACGTGTGGTCCTTAATTCTTGCATACTTCTTGACAGGAGTTACCTCCAAGAAATCCTTCCTTTTCTTTTGCTCTCTAGGTCCTTTCTCGATGATATCTTCTAGGACATTTGATTCTAGTATCCAAACAGAACCCTGAGGAGCAAAGAGCACATTTACAGTGCGAGCTTACTTGGTGATGCAAAGAATCACATAAGAGGAAACAGTACGTCTTGTACTATGGCTACACAAGAAAAACAACTTGAAATATTGCCCTTGATGATATATCTTCCTCTTCAAAAATTAGTAAAAATTGAATCACTATGGCACACAATTGCAGCGGATCAAAACCTGGAAGCAATCTTCTCATACCAGAGTTCAGACTAACAAGAAAAGCAAATGTATTCCAAGAGTTCTTCCAATTATGAAGCAACCACAAGAAAGTTAATACCTGAAACATATATCTCGACGAGCACGAAACAGAATGTATGCAAGTAAAATTCAAGAAGCTAAACTCCAAGCACCAAAATCTCGAGTTACAAGTCAATTTAGTAAACCCAACAACCACTACGAACATTAGTGGCGCAACTATAATATTTCAGTCAATTTTTCGCACGTTTGAATTCCTAAACGAAACAAGAATACAGAAAACCTGAATTGAGAATTAGAAATGCTGATTTCCAAGATTGGGAACTCCATTAAATACCTGTTTGTTCGAAAGAAATTCAAGGGATTGAAGAGGATCTGGCTCAGATTGCTCTAACTTTGCAGTGGCTTTAGCTAAATCCTTTTGAGACCTCTTGCTCAACTTGTTCAAAATGATGAAGATTCCAAAAGCCTCCGCCGCAACGATTGCCACAACCCCAAAAGCAAAACCAAACACGAACGTCAAAATCAAGACCGACCCCATTTTCAGTTTTTCGAAATTACCAACGAACTCTGAACCATCGAGTCTCAAGAAATTGGGTTACGGAAAAAGGGATTGCGATTAA

mRNA sequence

ATGAGAGCTGGAGCTGGATTAGCAGTACTTGATGAAGGCTTTGATGCATTTGACAAAAGCTCCTTGGTTAAGCCACATAAATGGTGCAACATCCCTTGGAACCCAGTCATCCTTCTCTGCCATCATAAATGGGATGTCATCTGGACTTTGTGCAAGCAATACGGTCAAAGCAAAGCCCCCAGAGTATTCAAAATCGACCTCCAAGGCCCATACCTCATTCAATTCAAAAGGAAGAACCCTAATAATATTAATATTGGGCGGGAGGTTTCCAGGATGAACTTTAGTACAGATAATTTCGCCAATATTCCAAAAGCCTCCGCCGCAACGATTGCCACAACCCCAAAAGCAAAACCAAACACGAACGTCAAAATCAAGACCGACCCCATTTTCAGTTTTTCGAAATTACCAACGAACTCTGAACCATCGAGTCTCAAGAAATTGGGTTACGGAAAAAGGGATTGCGATTAA

Coding sequence (CDS)

ATGAGAGCTGGAGCTGGATTAGCAGTACTTGATGAAGGCTTTGATGCATTTGACAAAAGCTCCTTGGTTAAGCCACATAAATGGTGCAACATCCCTTGGAACCCAGTCATCCTTCTCTGCCATCATAAATGGGATGTCATCTGGACTTTGTGCAAGCAATACGGTCAAAGCAAAGCCCCCAGAGTATTCAAAATCGACCTCCAAGGCCCATACCTCATTCAATTCAAAAGGAAGAACCCTAATAATATTAATATTGGGCGGGAGGTTTCCAGGATGAACTTTAGTACAGATAATTTCGCCAATATTCCAAAAGCCTCCGCCGCAACGATTGCCACAACCCCAAAAGCAAAACCAAACACGAACGTCAAAATCAAGACCGACCCCATTTTCAGTTTTTCGAAATTACCAACGAACTCTGAACCATCGAGTCTCAAGAAATTGGGTTACGGAAAAAGGGATTGCGATTAA

Protein sequence

MRAGAGLAVLDEGFDAFDKSSLVKPHKWCNIPWNPVILLCHHKWDVIWTLCKQYGQSKAPRVFKIDLQGPYLIQFKRKNPNNINIGREVSRMNFSTDNFANIPKASAATIATTPKAKPNTNVKIKTDPIFSFSKLPTNSEPSSLKKLGYGKRDCD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G014370.1CcUC01G014370.1mRNA