Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG
mRNA sequence
ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG
Coding sequence (CDS)
ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG
Protein sequence
MGIIGITHVLSDLSIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILHKQSSINFKML
Homology
BLAST of CcUC01G009580 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18
Identity = 53/80 (66.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query: 6 ITHVLSDLSIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPP 65
I + LSD +IKHPKRHI FS GK K I DL PPF++G LSKEER PSG S TSD PPP
Sbjct: 43 IENELSDENIKHPKRHIHFSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPP 102
Query: 66 PLHVSSTILHKQSSINFKML 86
P HV S ILHK+S INF++L
Sbjct: 103 PPHVISIILHKESRINFRVL 122
BLAST of CcUC01G009580 vs. NCBI nr
Match:
KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 82.0 bits (201), Expect = 2.7e-12
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 16 KHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILH 75
KHPK HIRFS KPK + DL PPFS+G LSK+ RT PSG S RT D P P HV ILH
Sbjct: 148 KHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDVRTPPSGSSQRTLDNPSLPPHVVPIILH 207
Query: 76 KQSSINFKML 86
K+S I F +L
Sbjct: 208 KKSRIEFGIL 217
BLAST of CcUC01G009580 vs. NCBI nr
Match:
KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa])
HSP 1 Score: 80.5 bits (197), Expect = 7.8e-12
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 16 KHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILH 75
KHPK HIRFS KPK + DL PPFS+G L K+ RT P G S RT D P PP H ILH
Sbjct: 155 KHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILH 214
Query: 76 KQSSINFKML 86
K+S I F +L
Sbjct: 215 KKSKIKFGIL 224
BLAST of CcUC01G009580 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 74.7 bits (182), Expect = 4.3e-10
Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 6 ITHVLSDLSIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPP 65
+ +VL I HPK+ FS KPK I DL PPFS+G LSK RT PSG S TS+ PP
Sbjct: 42 LENVLRGDIINHPKKVAHFSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS 101
Query: 66 PLHVSSTILHKQSSINFKML 86
P HV+ ILHK+S +NF +L
Sbjct: 102 P-HVAPIILHKESMVNFGIL 120
BLAST of CcUC01G009580 vs. NCBI nr
Match:
XP_031744003.1 (abl interactor homolog [Cucumis sativus])
HSP 1 Score: 65.5 bits (158), Expect = 2.6e-07
Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 15 IKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTIL 74
I HPK+HIRFS K K I D D G LSK+ R P GPS R+SD PPP S +L
Sbjct: 41 IIHPKQHIRFSRTKSKRIPDFDTHSGFGILSKDIRIPPFGPSQRSSDSTPPP----SIVL 100
Query: 75 HKQSSINFKML 86
HK+S +NF +L
Sbjct: 101 HKESRMNFGIL 107
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12
Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 16 KHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILH 75
KHPK HIRFS KPK + DL PPFS+G LSK+ RT PSG S RT D P P HV ILH
Sbjct: 148 KHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDVRTPPSGSSQRTLDNPSLPPHVVPIILH 207
Query: 76 KQSSINFKML 86
K+S I F +L
Sbjct: 208 KKSRIEFGIL 217
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 80.5 bits (197), Expect = 3.8e-12
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0
Query: 16 KHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILH 75
KHPK HIRFS KPK + DL PPFS+G L K+ RT P G S RT D P PP H ILH
Sbjct: 155 KHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDVRTPPFGSSQRTLDNPSPPPHAVPIILH 214
Query: 76 KQSSINFKML 86
K+S I F +L
Sbjct: 215 KKSKIKFGIL 224
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query: 6 ITHVLSDLSIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPP 65
+ +VL I HPK+ FS KPK I DL PPFS+G LSK RT PSG S TS+ PP
Sbjct: 42 LENVLRGDIINHPKKVAHFSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPS 101
Query: 66 PLHVSSTILHKQSSINFKML 86
P HV+ ILHK+S +NF +L
Sbjct: 102 P-HVAPIILHKESMVNFGIL 120
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06
Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
Query: 14 SIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTI 73
SI HPK++I FS K K + D F G SK+ R PSGPS R+SD PP P S I
Sbjct: 50 SIIHPKQYIHFSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMI 109
Query: 74 LHKQSSINFKML 86
L K+S INF +L
Sbjct: 110 LPKESRINFGIL 117
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 32 ILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILHKQSSINFKML 86
IL+ ++G L + PSGPS RTSD PPPP H SS IL+KQS INF ML
Sbjct: 273 ILNKHSKINLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGML 326
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882352.1 | 1.5e-18 | 66.25 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
KAA0038012.1 | 2.7e-12 | 61.43 | hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... | [more] |
KAA0037987.1 | 7.8e-12 | 58.57 | hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa] | [more] |
KAA0040932.1 | 4.3e-10 | 53.75 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
XP_031744003.1 | 2.6e-07 | 52.11 | abl interactor homolog [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BVE5 | 1.3e-12 | 61.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T8R0 | 3.8e-12 | 58.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CGG1 | 2.1e-10 | 53.75 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A5D3BP86 | 4.0e-06 | 50.00 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1HRH7 | 1.7e-04 | 55.56 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
Match Name | E-value | Identity | Description | |