CcUC01G009580 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG ATGGGAATCATTGGTATTACACATGTATTGAGTGACCTGAGTATAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAACATACTTGACTTAGATCCACCTTTCAGCGTGGGGACACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAAGCCACCTCCTCCACTGCATGTCTCGTCCACCATTTTGCATAAGCAATCTAGCATCAACTTCAAAATGTTATAG MGIIGITHVLSDLSIKHPKRHIRFSTGKPKNILDLDPPFSVGTLSKEERTTPSGPSPRTSDKPPPPLHVSSTILHKQSSINFKML Homology
BLAST of CcUC01G009580 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida]) HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18 Identity = 53/80 (66.25%), Postives = 60/80 (75.00%), Query Frame = 0
BLAST of CcUC01G009580 vs. NCBI nr
Match: KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 2.7e-12 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CcUC01G009580 vs. NCBI nr
Match: KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 7.8e-12 Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of CcUC01G009580 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 74.7 bits (182), Expect = 4.3e-10 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of CcUC01G009580 vs. NCBI nr
Match: XP_031744003.1 (abl interactor homolog [Cucumis sativus]) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-07 Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.3e-12 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.8e-12 Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-06 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of CcUC01G009580 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04 Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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