Carg28261 (gene) Silver-seed gourd (SMH-JMG-627) v2

InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
GGAAGACAATATAAGTCTTTTTTTACGGTAACCTTAAACTATCTTCCACCTCTCATCTTCGCGGAGTCCTCTCCCGTGCGCTCTCTATTTGCCCTCCTTCACTGCGAACCTTCCGGCGGACATACTCACCGAGACCATCCAAGGCGGCGCGTCGGCTCGACGGGCGAGAAGAAGGCTGCGCAGCTCCTTTTTGCGAGAGTTTGCAACATCGAATTACTGCAGGACCTTAAATTACAGGTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTTGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGACGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCGAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGATCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTGCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATCGGCAGCCGGATAAGCGAGTTGATCTCCTTACAACACTGA2004006008001000120014001600Expect = 1.3 / Score = 9.4Expect = 0.0094 / Score = 16.1Expect = 6.7E-5 / Score = 22.9Expect = 0.0029 / Score = 15.7Expect = 0.0012 / Score = 16.8Expect = 3.0E-9 / Score = 34.5Expect = 2.1E-8 / Score = 31.8Expect = 9.3E-7 / Score = 26.6Expect = 4.9E-10 / Score = 37.0Expect = 1.0E-8 / Score = 32.8Expect = 1.4E-17 / Score = 63.6Expect = 9.3E-19 / Score = 67.4Score = 12.517862Score = 8.845827Score = 13.318037Score = 10.961357Score = 10.39137Score = 12.232868Score = 13.044004Expect = 8.9E-20 / Score = 73.0Expect = 1.6E-12 / Score = 49.5Expect = 5.5E-18 / Score = 66.9Expect = 3.7E-38 / Score = 133.6Score = Score = Score = SequencePF01535PF13812TIGR00756PF13041PS51375PS51375PS51375PS51375PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10G3DSA:1.25.40.10PTHR47942:SF41PTHR47942SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 215..243
e-value: 0.0094
score: 16.1
coord: 179..208
e-value: 1.3
score: 9.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 339..399
e-value: 6.7E-5
score: 22.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 423..457
e-value: 4.9E-10
score: 37.0
coord: 283..316
e-value: 3.0E-9
score: 34.5
coord: 459..490
e-value: 1.0E-8
score: 32.8
coord: 215..244
e-value: 0.0012
score: 16.8
coord: 318..352
e-value: 2.1E-8
score: 31.8
coord: 390..422
e-value: 9.3E-7
score: 26.6
coord: 179..212
e-value: 0.0029
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 280..328
e-value: 1.4E-17
score: 63.6
coord: 420..469
e-value: 9.3E-19
score: 67.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..350
score: 12.517862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..280
score: 8.845827
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..490
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 13.044004
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 379..450
e-value: 8.9E-20
score: 73.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 152..245
e-value: 1.6E-12
score: 49.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 451..545
e-value: 5.5E-18
score: 66.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 246..378
e-value: 3.7E-38
score: 133.6
NoneNo IPR availablePANTHERPTHR47942:SF41OS05G0548600 PROTEINcoord: 124..553
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 124..553
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 160..374