Carg28261 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg28261
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr10: 7103742 .. 7106435 (-)
RNA-Seq ExpressionCarg28261
SyntenyCarg28261
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAGACAATATAAGTCTTTTTTTACGGTAACCTTAAACTATCTTCCACCTCTCATCTTCGCGGAGTCCTCTCCCGTGCGCTCTCTATTTGCCCTCCTTCACTGCGAACCTTCCGGCGGACATACTCACCGAGACCATCCAAGGCGGCGCGTCGGCTCGACGGGCGAGAAGAAGGCTGCGCAGCTCCTTTTTGCGAGGTTTCAAGCATCATGATCTCCCGAATGGACCTGGCCTAGCATTCATCTCCGTTCCTAAAGAGTTTGCAACATCGAATTACTGCAGGACCTTAAATTACAGGTGTTGATGATAATTAGTGAGTTATTTCTTCATGTTATGAGCCTAATTGAAGCCGCTGATTTTAGATTTGGTGCACCATCTTGATTTAGTAGAACAAAGGACCTTTTAGGTGAAGTAAAATTTCATTTTGTTTAGTAATAATTTTAATTCAGTTATGATTAAGTTAATTTTTTATCATCTGTTAGAATTTTATCGATAGTTGTTTACGTTCATTGGTTGTAAAATGTTACGTTCATTCTTGGATGAGAAGAACTGCGACCATTATATGATCAAACTGGCTGTATTGATGATCCCAGAGGTACTCATTGAACTTACTTCTCTCGAACATTGTCATCTAAATGATCAAGGCCTAAGGAATCTGAATGGTACAGAAGCTATGATATGTGCTTTAATATTGACCATGGCTCGGAATTGAATTATATTATATCATCATATTGTTGTCATGTATTGTACAGGTGCAGTTGTTCAGATTTGACCTATTTATTTGTTGAGGATTGTTGGGAGGGAGTTCACATGGCTAATTTAGGGATATTGATCAGATGGGTTTATTAAAAGGAATCACATCTCTGACTAGTATGAGGCCTTTTGGGGGAAGCCCAAAGCTCAAAACCCATGAGAATTTAGGCTCAAGTCGGTCAATATCACTATAATTGTGGTAGATTCGTGATTGTCCAACATTATTCATTTTGCCTCTTTATAGGGATGGGGCTGTGCAGAGATGGGTTAGGTGATTGGTGCTCTTCATTATGCTATCTGCTATTTTGGAACGGTGTTTTCTTATCAGGAGAACATTTTTCTGCCTTGATCTAGACCTGTTTTTCATATCTATTTGTCAAGCTACAGTTCTATTCATCCCTCATTCGTATGTATTGCTAACTTTTTTTTTTTTTTTTTGTCTAGGTCTGATAGGTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGGTATAAGATATTTGGGTTCGCTGATTTGTGTGTTGTAGTTCAATGATACAGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTTGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGACGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCGAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGATCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTGCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATCGGCAGCCGGATAAGCGAGTTGATCTCCTTACAACACTGA

mRNA sequence

GGAAGACAATATAAGTCTTTTTTTACGGTAACCTTAAACTATCTTCCACCTCTCATCTTCGCGGAGTCCTCTCCCGTGCGCTCTCTATTTGCCCTCCTTCACTGCGAACCTTCCGGCGGACATACTCACCGAGACCATCCAAGGCGGCGCGTCGGCTCGACGGGCGAGAAGAAGGCTGCGCAGCTCCTTTTTGCGAGAGTTTGCAACATCGAATTACTGCAGGACCTTAAATTACAGGTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTTGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGACGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCGAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGATCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTGCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATCGGCAGCCGGATAAGCGAGTTGATCTCCTTACAACACTGA

Coding sequence (CDS)

GGAAGACAATATAAGTCTTTTTTTACGGTAACCTTAAACTATCTTCCACCTCTCATCTTCGCGGAGTCCTCTCCCGTGCGCTCTCTATTTGCCCTCCTTCACTGCGAACCTTCCGGCGGACATACTCACCGAGACCATCCAAGGCGGCGCGTCGGCTCGACGGGCGAGAAGAAGGCTGCGCAGCTCCTTTTTGCGAGAGTTTGCAACATCGAATTACTGCAGGACCTTAAATTACAGGTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTTGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGACGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCGAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGATCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGCCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTGCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATCGGCAGCCGGATAAGCGAGTTGATCTCCTTACAACACTGA

Protein sequence

GRQYKSFFTVTLNYLPPLIFAESSPVRSLFALLHCEPSGGHTHRDHPRRRVGSTGEKKAAQLLFARVCNIELLQDLKLQVSKGEKLFQSDIEIGPKQYLKLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH
Homology
[Close]
BLAST of Carg28261 vs. NCBI nr
Match: KAG7023936.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0 

Query: 1   GRQYKSFFTVTLNYLPPLIFAESSPVRSLFALLHCEPSGGHTHRDHPRRRVGSTGEKKAA 60
           GRQYKSFFTVTLNYLPPLIFAESSPVRSLFALLHCEPSGGHTHRDHPRRRVGSTGEKKAA
Sbjct: 1   GRQYKSFFTVTLNYLPPLIFAESSPVRSLFALLHCEPSGGHTHRDHPRRRVGSTGEKKAA 60

Query: 61  QLLFARVCNIELLQDLKLQVSKGEKLFQSDIEIGPKQYLKLIKGSRLLVFHRNVCLIHFQ 120
           QLLFARVCNIELLQDLKLQVSKGEKLFQSDIEIGPKQYLKLIKGSRLLVFHRNVCLIHFQ
Sbjct: 61  QLLFARVCNIELLQDLKLQVSKGEKLFQSDIEIGPKQYLKLIKGSRLLVFHRNVCLIHFQ 120

Query: 121 LLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALALFEDYHERGFKHHYPSY 180
           LLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALALFEDYHERGFKHHYPSY
Sbjct: 121 LLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALALFEDYHERGFKHHYPSY 180

Query: 181 SSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGIELFHRMPS 240
           SSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGIELFHRMPS
Sbjct: 181 SSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGIELFHRMPS 240

Query: 241 FNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQ 300
           FNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQ
Sbjct: 241 FNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQ 300

Query: 301 ACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLME 360
           ACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLME
Sbjct: 301 ACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLME 360

Query: 361 GWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKP 420
           GWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKP
Sbjct: 361 GWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKP 420

Query: 421 DVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVL 480
           DVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVL
Sbjct: 421 DVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVL 480

Query: 481 NSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQ 540
           NSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQ
Sbjct: 481 NSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQ 540

Query: 541 DVVDIGSRISELISLQH 558
           DVVDIGSRISELISLQH
Sbjct: 541 DVVDIGSRISELISLQH 557

[Close]
BLAST of Carg28261 vs. NCBI nr
Match: KAG6590373.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 948.7 bits (2451), Expect = 2.2e-272
Identity = 457/458 (99.78%), Postives = 457/458 (99.78%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI
Sbjct: 64  EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKA LVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKARLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH
Sbjct: 424 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 461

[Close]
BLAST of Carg28261 vs. NCBI nr
Match: XP_022961570.1 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961571.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961572.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961573.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961574.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961575.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata] >XP_022961576.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita moschata])

HSP 1 Score: 936.8 bits (2420), Expect = 8.6e-269
Identity = 452/458 (98.69%), Postives = 454/458 (99.13%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCLIHFQLL THRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALF+DYHERGFKHHYPSYSSLIYKLARSRRFEAVEMIL HLQNRNIRCNETLFVALI
Sbjct: 64  EALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGK HLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYV FVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQDVVDIGSRI+ELISLQH
Sbjct: 424 KRQMRFDAETWRTLVMDACGQDVVDIGSRINELISLQH 461

[Close]
BLAST of Carg28261 vs. NCBI nr
Match: XP_023520779.1 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520780.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520781.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520782.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520783.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520784.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 929.1 bits (2400), Expect = 1.8e-266
Identity = 450/458 (98.25%), Postives = 453/458 (98.91%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCL+HFQLL THRPNK D+VSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLLHFQLLSTHRPNKSDYVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMIL HLQNRNIRCNETLFVALI
Sbjct: 64  EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGEN +YVCFVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENRDYVCFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQD VDIGSRISELISLQH
Sbjct: 424 KRQMRFDAETWRTLVMDACGQD-VDIGSRISELISLQH 460

[Close]
BLAST of Carg28261 vs. NCBI nr
Match: XP_022968715.1 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita maxima] >XP_022968716.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita maxima] >XP_022968717.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita maxima] >XP_022968718.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita maxima] >XP_022968719.1 pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita maxima])

HSP 1 Score: 914.1 bits (2361), Expect = 6.0e-262
Identity = 442/458 (96.51%), Postives = 449/458 (98.03%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCLIHFQLL THRPN+FD VSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLIHFQLLSTHRPNEFDRVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNI CNETLFVALI
Sbjct: 64  EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIHCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVE+GI+LFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVERGIDLFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRV+PSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVRPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKG+HPNAVTYALLMEGWC  GKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGHHPNAVTYALLMEGWCLTGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRV DAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS+YVCFVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSDYVCFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQD V+IGSRISELIS  H
Sbjct: 424 KRQMRFDAETWRTLVMDACGQD-VEIGSRISELISSLH 460

[Close]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match: Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-142
Identity = 250/452 (55.31%), Postives = 320/452 (70.80%), Query Frame = 0 

Query: 109 VFHRNVCLIHFQLLCTHRPNK-----FDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALA 168
           V   N C+   +   T RP K       H   HK  +K  E +PF+TD+KE++DP EAL+
Sbjct: 8   VLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALS 67

Query: 169 LFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYG 228
           LF  Y E GF+H YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYG
Sbjct: 68  LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127

Query: 229 KAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 288
           KA  V+K I++FH++ SF+C R+ QSLN L+N LVD  +  KA   F  A +M  RPNSV
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV 187

Query: 289 TYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENM 348
           ++NI+IKG++ K +WE AC +F+EMLE  VQPSVVTYNSL+G LCRN +M  A  L E+M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247

Query: 349 IQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNI 408
           I+K   PNAVT+ LLM+G C  G+Y EAKKLMFDME+ GCKP  VNYG+LM+ LGK G I
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307

Query: 409 DEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMM 468
           DE + LL EMKKRR+KPDVV YNILVN+LC E RV +AY+VL +MQ+ GC PNAATYRMM
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367

Query: 469 IDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQM 528
           IDGFC   DFD  + VLN+ML S HCP   TF  ++ GL++G N ++ CFVLE M K+ +
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427

Query: 529 RFDAETWRTLVMDACGQDVVDIGSRISELISL 556
            F +  W+ L+ D C +D       +SE+IS+
Sbjct: 428 SFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

[Close]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.3e-57
Identity = 135/462 (29.22%), Postives = 235/462 (50.87%), Query Frame = 0 

Query: 93  IGPKQYLKLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDV 152
           + P ++   +   RL  F  +      Q  CT +P     + P  Q    +  +  +T  
Sbjct: 6   VNPTRFPPFVASRRL--FSASASAASLQQYCTEKP----PIKPWPQRLFPKRLVSMITQQ 65

Query: 153 KEVKDPCEALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNR--NIRC 212
           + + D    + L+      GF H+Y +Y S+++KL+R+R F+ VE ++  L+N    I+C
Sbjct: 66  QNI-DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKC 125

Query: 213 NETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIF 272
            E LF+ L+++YG A   E  + +F R+P F   RS +SLN LLN L+   +F     +F
Sbjct: 126 GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMF 185

Query: 273 QQAYE-MGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCR 332
           + + E  G  PN  T N+++K   KK + E A  + +E+    + P++VTY ++LG    
Sbjct: 186 KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 245

Query: 333 NGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVN 392
            G+M++A  + E M+ +G +P+A TY +LM+G+C +G++ EA  +M DME +  +P  V 
Sbjct: 246 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 305

Query: 393 YGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQ 452
           YGV++  L K     E  ++ +EM +R   PD      +++ LC++ +V++A  +  KM 
Sbjct: 306 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 365

Query: 453 VGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSN 512
              C P+ A    +I   C  G    A K+ +     G  P L T+ +LI G+       
Sbjct: 366 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELT 425

Query: 513 YVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRISE 552
               + ++M +R+ + +A T+  L+        V  G R+ E
Sbjct: 426 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459

[Close]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match: Q3E9F0 (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.4e-48
Identity = 123/409 (30.07%), Postives = 217/409 (53.06%), Query Frame = 0 

Query: 149 VTDVKEVKDPCEALALF-EDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRN 208
           V+ +K  +DP   L +F +   ++GF H+  +YS L+  L R ++F AV+ IL  ++   
Sbjct: 60  VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119

Query: 209 IRCNETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVL---LNTLVDCDQFS 268
            R  E+LF+ L++H+ ++ L +K +E+F+ +      R + SLN +   LN L+D  + +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVI--ARVKPSLNAISTCLNLLIDSGEVN 179

Query: 269 KASEIFQQA-YEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQ-PSVVTYNS 328
            + ++   A + +G +PN+  +NI++K   K G+   A  +  EM    +  P+ +TY++
Sbjct: 180 LSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 239

Query: 329 LLGLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 388
           L+  L  +     A+ LFE+MI K G  P+ VT+ +++ G+C  G+ + AKK++  M+ +
Sbjct: 240 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 299

Query: 389 GCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDA 448
           GC P   NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C+ G  ++A
Sbjct: 300 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 359

Query: 449 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 508
            K+L +M+   C  +  TY +++ G  + G  + A+++L+     G      ++  ++  
Sbjct: 360 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 419

Query: 509 L-LRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRI 550
           L   GE    V F L  M +R +     TW  LV+  C     +IG R+
Sbjct: 420 LCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465

[Close]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.1e-48
Identity = 129/429 (30.07%), Postives = 202/429 (47.09%), Query Frame = 0 

Query: 155 VKDPCEA---LALFEDYHERG-FKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRC 214
           V++P EA     +F+   + G FK    + SS+I   A S  F++VE +L  ++  N   
Sbjct: 51  VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110

Query: 215 NETLFVALIQHYGKAHLVEKGIELFHRM-PSFNCFRSRQSLNVLLNTLVDCDQFSKASEI 274
            E  F+ + + YGKAHL +K ++LFHRM   F C RS +S N +LN +++   + +  E 
Sbjct: 111 IERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170

Query: 275 FQQA----YEMGFRPNSVTYNIMIK----------------------------------- 334
           +         M   PN +++N++IK                                   
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230

Query: 335 GWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHP 394
           G  K+   ++A  L +EM  +   PS V YN L+  LC+ G++     L +NM  KG  P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290

Query: 395 NAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLL 454
           N VTY  L+ G C  GK  +A  L+  M    C P  V YG L+  L K     +   LL
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350

Query: 455 NEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNA 514
           + M++R    +   Y++L++ L KEG+ E+A  +  KM   GC PN   Y +++DG C  
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410

Query: 515 GDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETW 540
           G  + A ++LN M+ SG  P   T++SL+ G  +         V +EM+K     +   +
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470

[Close]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.3e-46
Identity = 113/416 (27.16%), Postives = 189/416 (45.43%), Query Frame = 0 

Query: 173 FKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGI 232
           FKH   ++  +I KLA   + ++V+ +L  ++ +   C+E LF+++I  Y +  L E+ +
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131

Query: 233 ELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGW 292
           E+F+R+  F C  S +  N +L+TL+  ++      +++     GF PN  TYN+++K  
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191

Query: 293 IKKGEWEQACNLFNEM------------------------------LEKRVQPSVVTYNS 352
            K  + + A  L  EM                              L +R +P V  YN+
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251

Query: 353 LLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHG 412
           L+  LC+  +   A  L   M++KG  PN ++Y+ L+   C  G+ + A   +  M   G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311

Query: 413 CKPRPVNYGVLMTHLGKTGNIDEVESLLNEM-KKRRLKPDVVTYNILVNYLCKEGRVEDA 472
           C P       L+      G   +   L N+M +   L+P+VV YN LV   C  G +  A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371

Query: 473 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 532
             V   M+  GC+PN  TY  +I+GF   G  DGA+ + N ML SG CP +  + +++  
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431

Query: 533 LLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           L R         ++E M K        T+   +   C    +D   ++   +  QH
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487

[Close]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match: A0A6J1HAJ5 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462115 PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 4.2e-269
Identity = 452/458 (98.69%), Postives = 454/458 (99.13%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCLIHFQLL THRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALF+DYHERGFKHHYPSYSSLIYKLARSRRFEAVEMIL HLQNRNIRCNETLFVALI
Sbjct: 64  EALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGK HLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYV FVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQDVVDIGSRI+ELISLQH
Sbjct: 424 KRQMRFDAETWRTLVMDACGQDVVDIGSRINELISLQH 461

[Close]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match: A0A6J1HYX7 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467870 PE=4 SV=1)

HSP 1 Score: 914.1 bits (2361), Expect = 2.9e-262
Identity = 442/458 (96.51%), Postives = 449/458 (98.03%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIKGSRLLVFHRNVCLIHFQLL THRPN+FD VSPHKQHQKLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKGSRLLVFHRNVCLIHFQLLSTHRPNEFDRVSPHKQHQKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNI CNETLFVALI
Sbjct: 64  EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIHCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVE+GI+LFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVERGIDLFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRV+PSVVTYNSLLGLLCRNGEMDTALCL
Sbjct: 184 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVRPSVVTYNSLLGLLCRNGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           FENMIQKG+HPNAVTYALLMEGWC  GKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK
Sbjct: 244 FENMIQKGHHPNAVTYALLMEGWCLTGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRV DAYKVLVKMQVGGCNPNAAT
Sbjct: 304 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCNPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEME 519
           YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS+YVCFVLEEME
Sbjct: 364 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSDYVCFVLEEME 423

Query: 520 KRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           KRQMRFDAETWRTLVMDACGQD V+IGSRISELIS  H
Sbjct: 424 KRQMRFDAETWRTLVMDACGQD-VEIGSRISELISSLH 460

[Close]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match: A0A0A0M1K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570750 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 5.7e-234
Identity = 395/457 (86.43%), Postives = 427/457 (93.44%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIK SRLL+FHRNVCLI FQLL T  PNKFD  + HKQ +K+RE IPFVTDVKEVKDPC
Sbjct: 4   KLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNHKQRRKIRERIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFE+YHE+GFKHHYPSYSSLIYKLARSRRFEAVE IL HL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEM FR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMTHLGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
           TGNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEG+V DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 TGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVCFVLEEM 519
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGH P L+TFASL+VGLL+GEN+ +YVCFVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEM 423

Query: 520 EKRQMRFDAETWRTLVMDACGQDVVDIGSRISELISL 556
           EKRQ+RFDAETWR L+MD CGQ  V+IGS +++LISL
Sbjct: 424 EKRQLRFDAETWRILIMDVCGQH-VEIGSHLNDLISL 459

[Close]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match: A0A1S4DYZ6 (pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492193 PE=4 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 1.1e-232
Identity = 390/444 (87.84%), Postives = 417/444 (93.92%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIK S LL+FHRNVCLIHFQLL T   NKFD  + HKQ +KLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKRSSLLIFHRNVCLIHFQLLSTFSTNKFDSENHHKQRRKLREPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFE+YHE+GFKHHYPSYSSLIYKLARSRRFEAVE IL HL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMT+LGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTYLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
            GNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEGRV DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 AGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCDPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVCFVLEEM 519
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGHCP L+TFA L+VGLL+GEN+ +YVCFVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHCPHLKTFAFLVVGLLKGENNDDYVCFVLEEM 423

Query: 520 EKRQMRFDAETWRTLVMDACGQDV 543
           EKRQ+RFDAETWRTL+MD CGQ V
Sbjct: 424 EKRQLRFDAETWRTLIMDVCGQHV 447

[Close]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match: A0A5D3CEM1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003670 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 4.1e-232
Identity = 389/444 (87.61%), Postives = 416/444 (93.69%), Query Frame = 0 

Query: 100 KLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 159
           KLIK S LL+FHRNVCLIHFQLL T   NKFD  + HKQ +KL EPIPFVTDVKEVKDPC
Sbjct: 4   KLIKRSSLLIFHRNVCLIHFQLLSTFSTNKFDSENHHKQRRKLHEPIPFVTDVKEVKDPC 63

Query: 160 EALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALI 219
           EALALFE+YHE+GFKHHYPSYSSLIYKLARSRRFEAVE IL HL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 220 QHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 279
           QHYGKAHLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 280 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 339
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 340 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 399
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMT+LGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTYLGK 303

Query: 400 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 459
            GNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEGRV DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 AGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCDPNAAT 363

Query: 460 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVCFVLEEM 519
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGHCP L+TFA L+VGLL+GEN+ +YVCFVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHCPHLKTFAFLVVGLLKGENNDDYVCFVLEEM 423

Query: 520 EKRQMRFDAETWRTLVMDACGQDV 543
           EKRQ+RFDAETWRTL+MD CGQ V
Sbjct: 424 EKRQLRFDAETWRTLIMDVCGQHV 447

[Close]
BLAST of Carg28261 vs. TAIR 10
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 506.9 bits (1304), Expect = 2.1e-143
Identity = 250/452 (55.31%), Postives = 320/452 (70.80%), Query Frame = 0 

Query: 109 VFHRNVCLIHFQLLCTHRPNK-----FDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALA 168
           V   N C+   +   T RP K       H   HK  +K  E +PF+TD+KE++DP EAL+
Sbjct: 8   VLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALS 67

Query: 169 LFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYG 228
           LF  Y E GF+H YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYG
Sbjct: 68  LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127

Query: 229 KAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 288
           KA  V+K I++FH++ SF+C R+ QSLN L+N LVD  +  KA   F  A +M  RPNSV
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV 187

Query: 289 TYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENM 348
           ++NI+IKG++ K +WE AC +F+EMLE  VQPSVVTYNSL+G LCRN +M  A  L E+M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247

Query: 349 IQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNI 408
           I+K   PNAVT+ LLM+G C  G+Y EAKKLMFDME+ GCKP  VNYG+LM+ LGK G I
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307

Query: 409 DEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMM 468
           DE + LL EMKKRR+KPDVV YNILVN+LC E RV +AY+VL +MQ+ GC PNAATYRMM
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367

Query: 469 IDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQM 528
           IDGFC   DFD  + VLN+ML S HCP   TF  ++ GL++G N ++ CFVLE M K+ +
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427

Query: 529 RFDAETWRTLVMDACGQDVVDIGSRISELISL 556
            F +  W+ L+ D C +D       +SE+IS+
Sbjct: 428 SFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

[Close]
BLAST of Carg28261 vs. TAIR 10
Match: AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.9e-58
Identity = 135/462 (29.22%), Postives = 235/462 (50.87%), Query Frame = 0 

Query: 93  IGPKQYLKLIKGSRLLVFHRNVCLIHFQLLCTHRPNKFDHVSPHKQHQKLREPIPFVTDV 152
           + P ++   +   RL  F  +      Q  CT +P     + P  Q    +  +  +T  
Sbjct: 6   VNPTRFPPFVASRRL--FSASASAASLQQYCTEKP----PIKPWPQRLFPKRLVSMITQQ 65

Query: 153 KEVKDPCEALALFEDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNR--NIRC 212
           + + D    + L+      GF H+Y +Y S+++KL+R+R F+ VE ++  L+N    I+C
Sbjct: 66  QNI-DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKC 125

Query: 213 NETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIF 272
            E LF+ L+++YG A   E  + +F R+P F   RS +SLN LLN L+   +F     +F
Sbjct: 126 GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMF 185

Query: 273 QQAYE-MGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCR 332
           + + E  G  PN  T N+++K   KK + E A  + +E+    + P++VTY ++LG    
Sbjct: 186 KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 245

Query: 333 NGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVN 392
            G+M++A  + E M+ +G +P+A TY +LM+G+C +G++ EA  +M DME +  +P  V 
Sbjct: 246 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 305

Query: 393 YGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQ 452
           YGV++  L K     E  ++ +EM +R   PD      +++ LC++ +V++A  +  KM 
Sbjct: 306 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 365

Query: 453 VGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSN 512
              C P+ A    +I   C  G    A K+ +     G  P L T+ +LI G+       
Sbjct: 366 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELT 425

Query: 513 YVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRISE 552
               + ++M +R+ + +A T+  L+        V  G R+ E
Sbjct: 426 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459

[Close]
BLAST of Carg28261 vs. TAIR 10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-49
Identity = 123/409 (30.07%), Postives = 217/409 (53.06%), Query Frame = 0 

Query: 149 VTDVKEVKDPCEALALF-EDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRN 208
           V+ +K  +DP   L +F +   ++GF H+  +YS L+  L R ++F AV+ IL  ++   
Sbjct: 60  VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119

Query: 209 IRCNETLFVALIQHYGKAHLVEKGIELFHRMPSFNCFRSRQSLNVL---LNTLVDCDQFS 268
            R  E+LF+ L++H+ ++ L +K +E+F+ +      R + SLN +   LN L+D  + +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVI--ARVKPSLNAISTCLNLLIDSGEVN 179

Query: 269 KASEIFQQA-YEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQ-PSVVTYNS 328
            + ++   A + +G +PN+  +NI++K   K G+   A  +  EM    +  P+ +TY++
Sbjct: 180 LSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 239

Query: 329 LLGLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 388
           L+  L  +     A+ LFE+MI K G  P+ VT+ +++ G+C  G+ + AKK++  M+ +
Sbjct: 240 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 299

Query: 389 GCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDA 448
           GC P   NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C+ G  ++A
Sbjct: 300 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 359

Query: 449 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 508
            K+L +M+   C  +  TY +++ G  + G  + A+++L+     G      ++  ++  
Sbjct: 360 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 419

Query: 509 L-LRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRI 550
           L   GE    V F L  M +R +     TW  LV+  C     +IG R+
Sbjct: 420 LCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465

[Close]
BLAST of Carg28261 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 2.9e-49
Identity = 129/429 (30.07%), Postives = 202/429 (47.09%), Query Frame = 0 

Query: 155 VKDPCEA---LALFEDYHERG-FKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRC 214
           V++P EA     +F+   + G FK    + SS+I   A S  F++VE +L  ++  N   
Sbjct: 51  VENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVI 110

Query: 215 NETLFVALIQHYGKAHLVEKGIELFHRM-PSFNCFRSRQSLNVLLNTLVDCDQFSKASEI 274
            E  F+ + + YGKAHL +K ++LFHRM   F C RS +S N +LN +++   + +  E 
Sbjct: 111 IERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170

Query: 275 FQQA----YEMGFRPNSVTYNIMIK----------------------------------- 334
           +         M   PN +++N++IK                                   
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230

Query: 335 GWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHP 394
           G  K+   ++A  L +EM  +   PS V YN L+  LC+ G++     L +NM  KG  P
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290

Query: 395 NAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLL 454
           N VTY  L+ G C  GK  +A  L+  M    C P  V YG L+  L K     +   LL
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350

Query: 455 NEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNA 514
           + M++R    +   Y++L++ L KEG+ E+A  +  KM   GC PN   Y +++DG C  
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410

Query: 515 GDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVCFVLEEMEKRQMRFDAETW 540
           G  + A ++LN M+ SG  P   T++SL+ G  +         V +EM+K     +   +
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470

[Close]
BLAST of Carg28261 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-47
Identity = 113/416 (27.16%), Postives = 189/416 (45.43%), Query Frame = 0 

Query: 173 FKHHYPSYSSLIYKLARSRRFEAVEMILDHLQNRNIRCNETLFVALIQHYGKAHLVEKGI 232
           FKH   ++  +I KLA   + ++V+ +L  ++ +   C+E LF+++I  Y +  L E+ +
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131

Query: 233 ELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGW 292
           E+F+R+  F C  S +  N +L+TL+  ++      +++     GF PN  TYN+++K  
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191

Query: 293 IKKGEWEQACNLFNEM------------------------------LEKRVQPSVVTYNS 352
            K  + + A  L  EM                              L +R +P V  YN+
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251

Query: 353 LLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHG 412
           L+  LC+  +   A  L   M++KG  PN ++Y+ L+   C  G+ + A   +  M   G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311

Query: 413 CKPRPVNYGVLMTHLGKTGNIDEVESLLNEM-KKRRLKPDVVTYNILVNYLCKEGRVEDA 472
           C P       L+      G   +   L N+M +   L+P+VV YN LV   C  G +  A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371

Query: 473 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 532
             V   M+  GC+PN  TY  +I+GF   G  DGA+ + N ML SG CP +  + +++  
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431

Query: 533 LLRGENSNYVCFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRISELISLQH 558
           L R         ++E M K        T+   +   C    +D   ++   +  QH
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487

The following BLAST results are available for this feature:
BLAST of Carg28261 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023936.10.0e+00100.00Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6590373.12.2e-27299.78Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022961570.18.6e-26998.69pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita ... [more]
XP_023520779.11.8e-26698.25pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita ... [more]
XP_022968715.16.0e-26296.51pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Cucurbita ... [more]
BLAST of Carg28261 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQQ12.9e-14255.31Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
Q9FFE38.3e-5729.22Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop... [more]
Q3E9F02.4e-4830.07Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX... [more]
O494364.1e-4830.07Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9M3022.3e-4627.16Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg28261 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HAJ54.2e-26998.69pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Cucurbit... [more]
A0A6J1HYX72.9e-26296.51pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Cucurbit... [more]
A0A0A0M1K95.7e-23486.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570750 PE=4 SV=1[more]
A0A1S4DYZ61.1e-23287.84pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like isofor... [more]
A0A5D3CEM14.1e-23287.61Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Carg28261 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07740.12.1e-14355.31Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G16420.15.9e-5829.22Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G18475.11.7e-4930.07Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.12.9e-4930.07Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G48810.11.6e-4727.16Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 215..243
e-value: 0.0094
score: 16.1
coord: 179..208
e-value: 1.3
score: 9.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 339..399
e-value: 6.7E-5
score: 22.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 423..457
e-value: 4.9E-10
score: 37.0
coord: 283..316
e-value: 3.0E-9
score: 34.5
coord: 459..490
e-value: 1.0E-8
score: 32.8
coord: 215..244
e-value: 0.0012
score: 16.8
coord: 318..352
e-value: 2.1E-8
score: 31.8
coord: 390..422
e-value: 9.3E-7
score: 26.6
coord: 179..212
e-value: 0.0029
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 280..328
e-value: 1.4E-17
score: 63.6
coord: 420..469
e-value: 9.3E-19
score: 67.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..350
score: 12.517862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..280
score: 8.845827
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 13.318037
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..490
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 13.044004
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 379..450
e-value: 8.9E-20
score: 73.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 152..245
e-value: 1.6E-12
score: 49.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 451..545
e-value: 5.5E-18
score: 66.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 246..378
e-value: 3.7E-38
score: 133.6
NoneNo IPR availablePANTHERPTHR47942:SF41OS05G0548600 PROTEINcoord: 124..553
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 124..553
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 160..374

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg28261-RACarg28261-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding